A B C D E F G H I J K L M N O P R S T U V W X Y Z

A

a - Variable in class yawn.nn.appart.PredictionLayer

activate() - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

activation - Variable in class yawn.nn.gasart.GasRecognitionNode

activationFunction(Pattern) - Method in class yawn.nn.appart.PredictionNeuralNode

activationFunction(Pattern) - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

activationFunction(Pattern) - Method in class yawn.nn.mlp.PerceptronNode

activationFunction(Pattern) - Method in class yawn.nn.NeuralNode

activationFuntion(Pattern) - Method in class yawn.nn.gasart.GasRecognitionNode

adapt(Pattern, double, double) - Method in class yawn.nn.mlp.MLPLayer

adapt(double, double, double) - Method in class yawn.nn.mlp.PerceptronNode

Adapt the weights using the delta rule.

adapting - Variable in class yawn.nn.Layer

add(Pattern) - Method in class yawn.util.Pattern

Element-wise addition.

add(double) - Method in class yawn.util.Pattern

Scalar addition.

addCommitteeMember(CommitteeElement) - Method in class yawn.nn.committee.NetworkCommitteeConfig

addCommitteeMembers(NeuralNetwork) - Method in class yawn.nn.committee.NetworkCommittee

addHiddenLayerConfig(LayerElement) - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

addHiddenLayerConfig(LayerElement) - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

addLayer(int, MLPLayer) - Method in class yawn.nn.mlp.MultiLayerPerceptron

addLayer(MLPLayer) - Method in class yawn.nn.mlp.MultiLayerPerceptron

adjunct - Variable in class yawn.nn.appart.GainControlUnitOnMatching

alphaArtA - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

alphaArtB - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

amount - Variable in class yawn.nn.committee.CommitteeElement

AppArt - Class in yawn.nn.appart

This class implements the AppART neural network.

AppArt() - Constructor for class yawn.nn.appart.AppArt

AppArtConfig - Class in yawn.nn.appart

$Id: AppArtConfig.java,v 1.6 2005/04/07 17:28:25 supermarti Exp $

AppArtConfig() - Constructor for class yawn.nn.appart.AppArtConfig

appendComponent(double) - Method in class yawn.util.Pattern

Appends an element to the Pattern.

artA - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

artB - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

asDoubleArray() - Method in class yawn.util.Pattern

The elements of this Pattern as a double[].

assamble(Pattern[]) - Method in class yawn.nn.committee.functions.CommitteeFunction

Builds a committe response from an array of outputs.

assamble(Pattern[]) - Method in class yawn.nn.committee.functions.Popularity

Average - Class in yawn.nn.committee.functions

$Id: Average.java,v 1.3 2005/04/07 17:28:30 supermarti Exp $

Average() - Constructor for class yawn.nn.committee.functions.Average

B

b - Variable in class yawn.nn.appart.PredictionLayer

betaArtA - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

betaArtB - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

BetwixtXmlSerializer - Class in yawn.io.serialization.xml

XML configuration serializer.

BetwixtXmlSerializer() - Constructor for class yawn.io.serialization.xml.BetwixtXmlSerializer

bigG() - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

bigG(Pattern) - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

binaryTest(int, int) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

bmuFact - Variable in class yawn.nn.gasart.GasArt

bThenAActivation(Pattern, Pattern) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

Activates ARTb before ARTa, this kind of activation avoids the ``match tracking anomaly'' reported in

buildNeuralNetworkFromChromosome(Chromosome) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapJGapAdapter

buildNeuralNetworkFromChromosome(Chromosome) - Method in class yawn.optim.genetic.JGapAdapter

C

calculateAbsoluteError(Pattern, Pattern) - Method in class yawn.nn.appart.GainControlUnitOnOutput

calculateDeltasAsHiddenLayer(Pattern) - Method in class yawn.nn.mlp.MLPLayer

calculateDeltasAsOutputLayer(Pattern) - Method in class yawn.nn.mlp.MLPLayer

calculateHiddenLayerDelta(Pattern, Pattern) - Method in class yawn.nn.mlp.PerceptronNode

Calculate the deltas using the subsequent layer deltas and the weights emmanent from this node.

calculateNormalizedActivations() - Method in class yawn.nn.appart.RecognitionLayer

calculateNormalizedActivations() - Method in class yawn.nn.gasart.GasRecognitionLayer

does nothing

calculateOutputLayerDelta(double) - Method in class yawn.nn.mlp.PerceptronNode

calculateRelativeError(Pattern, Pattern) - Method in class yawn.nn.appart.GainControlUnitOnOutput

CastorXmlSerializer - Class in yawn.io.serialization.xml

XML serializer based on Castor (@link http://castor.exolab.org) $Id: CastorXmlSerializer.java,v 1.3 2005/04/07 17:28:30 supermarti Exp $

CastorXmlSerializer() - Constructor for class yawn.io.serialization.xml.CastorXmlSerializer

categoryIndex - Variable in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

center - Variable in class yawn.envs.synthetic.CircleInTheSquareEnvironment

checkDimensions(Object[], Object[]) - Static method in class yawn.util.DefaultStatisticsFacility

checkDimensions(Pattern[], Pattern[]) - Static method in class yawn.util.ErrorUtils

checkEqualSize(Pattern) - Method in class yawn.util.Pattern

Checks if a Pattern has equal size.

CircleInTheSquareEnvironment - Class in yawn.envs.synthetic

A synthetic environment for the circle-in-the-square problem.

CircleInTheSquareEnvironment() - Constructor for class yawn.envs.synthetic.CircleInTheSquareEnvironment

clean() - Method in class yawn.nn.gasart.GasArt

clone() - Method in class yawn.util.Pattern

combinationFunction - Variable in class yawn.nn.committee.NetworkCommittee

the function used to combine the results from each committe member

combinationFunctionClass - Variable in class yawn.nn.committee.NetworkCommitteeConfig

committee - Variable in class yawn.nn.committee.NetworkCommittee

CommitteeElement - Class in yawn.nn.committee

This is yawn.nn.committee.ComitteElement, part of the yawn project.

CommitteeElement() - Constructor for class yawn.nn.committee.CommitteeElement

committeeElements - Variable in class yawn.nn.committee.NetworkCommitteeConfig

CommitteeFunction - Class in yawn.nn.committee.functions

$Id: CommitteeFunction.java,v 1.3 2005/04/07 17:28:30 supermarti Exp $

CommitteeFunction() - Constructor for class yawn.nn.committee.functions.CommitteeFunction

complementCode(double[]) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

complementCoding - Variable in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

computeAllLengths() - Method in class yawn.nn.gasart.GasArt

computeAllSigmas() - Method in class yawn.nn.gasart.GasArt

computeError(Pattern, Pattern) - Method in class yawn.nn.appart.AppArt

computePredictionError(NeuralNetwork, InputOutputPattern[]) - Method in class yawn.util.DefaultStatisticsFacility

Calculates the prediction error as the mean squared error

computePredictionError(NeuralNetwork, InputOutputPattern[]) - Method in interface yawn.util.StatisticsFacility

config - Variable in class yawn.nn.mlp.MultiLayerPerceptron

ConfigElement - Class in yawn.config

This is yawn.nn.ConfigElement, part of the yawn project.

ConfigElement() - Constructor for class yawn.config.ConfigElement

ConfigurationException - Exception in yawn.config

This is yawn.nn.ConfigurationException, part of the yawn project.

ConfigurationException() - Constructor for exception yawn.config.ConfigurationException

ConfigurationException(String) - Constructor for exception yawn.config.ConfigurationException

ConfigurationException(String, Throwable) - Constructor for exception yawn.config.ConfigurationException

ConfigurationException(Throwable) - Constructor for exception yawn.config.ConfigurationException

configuredNetworkFactory() - Method in class yawn.config.NeuralNetworkConfig

A factory of ready to train (and use) neural networks

configuredNetworkFactory() - Method in class yawn.nn.appart.AppArtConfig

connectWith(Layer) - Method in class yawn.nn.Layer

context - Variable in class yawn.io.Experiment

copy() - Method in class yawn.nn.mlp.MultiLayerPerceptron

currentEpoch - Variable in class yawn.nn.mlp.MultiLayerPerceptron

currentEpoch - Variable in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

currentUncommitted - Variable in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

D

dataFileName - Variable in class yawn.envs.plaintext.PlainTextEnvironment

debug - Variable in class yawn.ui.cli.RunExperiment

defaultSigma - Variable in class yawn.nn.gasart.GasRecognitionNode

DefaultStatisticsFacility - Class in yawn.util

This is yawn.util.DefaultStatisticsFacility, part of the yawn project.

DefaultStatisticsFacility() - Constructor for class yawn.util.DefaultStatisticsFacility

deleteCategory(GasRecognitionNode) - Method in class yawn.nn.gasart.GasRecognitionLayer

DelveEnvironment - Class in yawn.envs.delve

DelveEnvironment() - Constructor for class yawn.envs.delve.DelveEnvironment

DelveNotInitializedException - Exception in yawn.envs.delve

This is yawn.envs.delve.DelveNotInitializedException, part of the yawn project.

DelveNotInitializedException() - Constructor for exception yawn.envs.delve.DelveNotInitializedException

DelveNotInitializedException(String) - Constructor for exception yawn.envs.delve.DelveNotInitializedException

DelveNotInitializedException(Throwable) - Constructor for exception yawn.envs.delve.DelveNotInitializedException

DelveNotInitializedException(String, Throwable) - Constructor for exception yawn.envs.delve.DelveNotInitializedException

deScaleZeroOneOutput(Pattern) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

deSerialize(Class, InputStreamReader) - Method in interface yawn.io.serialization.ISerializer

Reads an object of class root from a source

deSerialize(Class, InputStreamReader) - Method in class yawn.io.serialization.xml.BetwixtXmlSerializer

deSerialize(Class, InputStreamReader) - Method in class yawn.io.serialization.xml.CastorXmlSerializer

deSerializeObject(File) - Method in class yawn.io.xml.XmlStorage

desiredMeanSquaredError - Variable in class yawn.nn.appart.AppArt

desiredMeanSquaredError - Variable in class yawn.nn.appart.AppArtConfig

deviationsProduct() - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

df(double) - Method in class yawn.nn.mlp.LinearNode

df(double) - Method in class yawn.nn.mlp.PerceptronNode

df(double) - Method in class yawn.nn.mlp.SigmoidNode

dist(Pattern) - Method in class yawn.util.Pattern

Calculates an Euclidean distance from this Pattern.

doBackTrack() - Method in class yawn.nn.appart.AppArt

doBackTrack() - Method in class yawn.nn.gasart.GasArt

doMatchTracking() - Method in class yawn.nn.appart.AppArt

doMatchTracking() - Method in class yawn.nn.gasart.GasArt

doubleTest(int, int) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

DuplicateKeyException - Exception in yawn.io

$Id: DuplicateKeyException.java,v 1.3 2005/04/07 17:28:25 supermarti Exp $

DuplicateKeyException() - Constructor for exception yawn.io.DuplicateKeyException

DuplicateKeyException(String) - Constructor for exception yawn.io.DuplicateKeyException

DuplicateKeyException(String, Throwable) - Constructor for exception yawn.io.DuplicateKeyException

DuplicateKeyException(Throwable) - Constructor for exception yawn.io.DuplicateKeyException

E

e - Variable in class yawn.nn.appart.PredictionNeuralNode

edgesVector - Variable in class yawn.nn.gasart.GasArt

Stores the F2 layer topoCommons.LOGy

edgeWith(GasRecognitionNode) - Method in class yawn.nn.gasart.GasRecognitionNode

ELEMENT_SEPARATOR - Static variable in class yawn.util.Pattern

ELEMENT_SEPARATOR_SPACE - Static variable in class yawn.envs.plaintext.PlainTextEnvironment

elementSeparator - Variable in class yawn.envs.plaintext.PlainTextEnvironment

environment - Variable in class yawn.config.NeuralNetworkConfig

The environment in which this network will be trained.

Environment - Class in yawn.envs

Specifies methods that should provide a way to interact with a test environment.

Environment() - Constructor for class yawn.envs.Environment

environment - Variable in class yawn.io.Experiment

EnvironmentException - Exception in yawn.envs

Represents an error when interacting with a given environment.

EnvironmentException(String) - Constructor for exception yawn.envs.EnvironmentException

EnvironmentException(String, Throwable) - Constructor for exception yawn.envs.EnvironmentException

EnvironmentException(Throwable) - Constructor for exception yawn.envs.EnvironmentException

EnvironmentException() - Constructor for exception yawn.envs.EnvironmentException

environmentValidate() - Method in class yawn.config.NeuralNetworkConfig

epsilon - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

small amount added when doing match tracking

equals(Object) - Method in class yawn.config.ConfigElement

equals(Pattern) - Method in class yawn.util.Pattern

errorSum - Variable in class yawn.nn.mlp.MultiLayerPerceptron

ErrorUtils - Class in yawn.util

Utility class that contains some usefull error metrics $Id: ErrorUtils.java,v 1.3 2005/04/07 17:28:30 supermarti Exp $

ErrorUtils() - Constructor for class yawn.util.ErrorUtils

eta - Variable in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

evalSet - Variable in class yawn.optim.genetic.JGapAdapter

evaluate(Chromosome) - Method in class yawn.optim.genetic.JGapAdapter

Experiment - Class in yawn.io

Stores the information about learning methods and test environments configurations.

Experiment() - Constructor for class yawn.io.Experiment

experimentFileName - Variable in class yawn.ui.cli.RunExperiment

F

f(double) - Method in class yawn.nn.mlp.LinearNode

f(double) - Method in class yawn.nn.mlp.PerceptronNode

f(double) - Method in class yawn.nn.mlp.SigmoidNode

f2GainControl - Variable in class yawn.nn.appart.AppArt

f2Layer - Variable in class yawn.nn.appart.AppArt

fires() - Method in class yawn.nn.appart.GainControlUnit

fires() - Method in class yawn.nn.appart.GainControlUnitOnMatching

fires() - Method in class yawn.nn.appart.GainControlUnitOnOutput

fittedModel - Variable in class yawn.optim.genetic.GeneticParameterFitter

flush() - Method in interface yawn.io.IStorage

flush() - Method in class yawn.io.xml.XmlStorage

FuzzyArt - Class in yawn.nn.fuzzyartmap.fuzzyart

This is yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt, part of the yawn project.

FuzzyArt() - Constructor for class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

FuzzyArt(double, double, double, int, int, boolean) - Constructor for class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

FuzzyArtMap - Class in yawn.nn.fuzzyartmap

Implements the Fuzzy ARTMAP neural network, as described in

FuzzyArtMap() - Constructor for class yawn.nn.fuzzyartmap.FuzzyArtMap

FuzzyArtMapConfig - Class in yawn.nn.fuzzyartmap

$Id: FuzzyArtMapConfig.java,v 1.5 2005/04/07 17:28:25 supermarti Exp $

FuzzyArtMapConfig() - Constructor for class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

FuzzyArtMapJGapAdapter - Class in yawn.nn.fuzzyartmap

This is yawn.nn.fuzzyartmap.FuzzyArtMapJGapAdapter, part of the yawn project.

FuzzyArtMapJGapAdapter(FuzzyArtMapConfig) - Constructor for class yawn.nn.fuzzyartmap.FuzzyArtMapJGapAdapter

G

g - Variable in class yawn.nn.appart.RecognitionLayer

GainControlUnit - Class in yawn.nn.appart

A general gain control.

GainControlUnit() - Constructor for class yawn.nn.appart.GainControlUnit

GainControlUnitOnMatching - Class in yawn.nn.appart

A recognition (F2) layer gain control.

GainControlUnitOnMatching(double, Layer) - Constructor for class yawn.nn.appart.GainControlUnitOnMatching

GainControlUnitOnOutput - Class in yawn.nn.appart

An output layer gain control.

GainControlUnitOnOutput(double) - Constructor for class yawn.nn.appart.GainControlUnitOnOutput

GasArt - Class in yawn.nn.gasart

This class implements the GasArt neural network.

GasArt(int, int, double, double, double, double, double, double, int) - Constructor for class yawn.nn.gasart.GasArt

GasEdge - Class in yawn.nn.gasart

A Growing Neural Gas edge $Id: GasEdge.java,v 1.7 2005/04/07 17:28:27 supermarti Exp $

GasEdge(GasRecognitionNode, GasRecognitionNode) - Constructor for class yawn.nn.gasart.GasEdge

GasRecognitionLayer - Class in yawn.nn.gasart

A GasART recognition (F2) layer $Id: GasRecognitionLayer.java,v 1.8 2005/04/07 17:28:27 supermarti Exp $

GasRecognitionLayer(Layer, GainControlUnitOnMatching, int) - Constructor for class yawn.nn.gasart.GasRecognitionLayer

GasRecognitionNode - Class in yawn.nn.gasart

A neural node of the recognition (F2) layer of GasART networks $Id: GasRecognitionNode.java,v 1.7 2005/04/07 17:28:26 supermarti Exp $

GasRecognitionNode(int, double, int) - Constructor for class yawn.nn.gasart.GasRecognitionNode

generateKey(Object) - Method in interface yawn.io.IStorage

generateKey(Object) - Method in class yawn.io.xml.XmlStorage

generateRandomInput() - Method in class yawn.envs.synthetic.CircleInTheSquareEnvironment

generateRandomInput() - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

generateRandomInput() - Method in class yawn.envs.synthetic.XOrDataEnvironment

generateSet(int) - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

GeneticParameterFitter - Class in yawn.optim.genetic

This is yawn.optim.GeneticParameterFitter, part of the yawn project.

GeneticParameterFitter() - Constructor for class yawn.optim.genetic.GeneticParameterFitter

GeneticParameterFitterConfig - Class in yawn.optim.genetic

This is yawn.optim.genetic.GeneticParameterFitterConfig, part of the yawn project.

GeneticParameterFitterConfig() - Constructor for class yawn.optim.genetic.GeneticParameterFitterConfig

get(String) - Method in interface yawn.io.IStorage

Retrieves the IPersistent implementor instance that matches the provided id.

get(String) - Method in class yawn.io.xml.XmlStorage

Returns the object stored in the file named as the key.

getActivation() - Method in class yawn.nn.gasart.GasRecognitionNode

getActivations() - Method in class yawn.nn.InputLayer

getActivations() - Method in class yawn.nn.Layer

getAdapterInstance() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getAdapterInstance() - Method in interface yawn.optim.OptimizableModel

getAdapting() - Method in class yawn.nn.NeuralNetwork

getAll() - Method in interface yawn.io.IStorage

Retrieves all the instances of IPersistent implementors present in the underlying storage.

getAll() - Method in class yawn.io.xml.XmlStorage

Returns all objects in the repository.

getAlphaArtA() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getAlphaArtA() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

getAlphaArtB() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getAlphaArtB() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

getAmount() - Method in class yawn.nn.committee.CommitteeElement

getAUnits() - Method in class yawn.nn.appart.PredictionLayer

getBaseVigilanceParameter() - Method in class yawn.nn.appart.GainControlUnitOnMatching

getBetaArtA() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getBetaArtA() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

getBetaArtB() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getBetaArtB() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

getBindedNetworkClass() - Method in class yawn.config.NeuralNetworkConfig

getBindedNetworkClass() - Method in class yawn.nn.appart.AppArtConfig

getBindedNetworkClass() - Method in class yawn.nn.committee.NetworkCommitteeConfig

getBindedNetworkClass() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

getBindedNetworkClass() - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

getBindedNetworkClass() - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

getBindedNetworkClass() - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

getBUnit() - Method in class yawn.nn.appart.PredictionLayer

getCategoryIndex() - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

getCombinationFunction() - Method in class yawn.nn.committee.NetworkCommittee

getCombinationFunctionClass() - Method in class yawn.nn.committee.NetworkCommitteeConfig

getCommitteeElements() - Method in class yawn.nn.committee.NetworkCommitteeConfig

getCommitteMembers() - Method in class yawn.nn.committee.NetworkCommittee

getCommitteSize() - Method in class yawn.nn.committee.NetworkCommittee

getComponent(int) - Method in class yawn.util.Pattern

Returns the i -nary element of the Pattern.

getContext() - Method in class yawn.io.Experiment

getContext() - Method in interface yawn.io.IStorage

getContext() - Method in class yawn.io.xml.XmlStorage

getDataFileName() - Method in class yawn.envs.plaintext.PlainTextEnvironment

getDesiredMeanSquaredError() - Method in class yawn.nn.appart.AppArt

getDesiredMeanSquaredError() - Method in class yawn.nn.appart.AppArtConfig

getE() - Method in class yawn.nn.appart.PredictionNeuralNode

getElementSeparator() - Method in class yawn.envs.plaintext.PlainTextEnvironment

getEnvironment() - Method in class yawn.config.NeuralNetworkConfig

getEnvironment() - Method in class yawn.io.Experiment

getEpsilon() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getEpsilon() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

getError() - Method in class yawn.nn.appart.GainControlUnitOnOutput

getEta() - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

getEvalSet() - Method in class yawn.optim.genetic.JGapAdapter

getExperimentFileName() - Method in class yawn.ui.cli.RunExperiment

getF2Layer() - Method in class yawn.nn.appart.AppArt

getF2NodeActivation(int) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

getFileNameSuffix() - Method in class yawn.io.xml.XmlContext

getFittedModel() - Method in class yawn.optim.genetic.GeneticParameterFitter

getFullTestDataset(int) - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

getHeaviest() - Method in class yawn.nn.gasart.GasArt

getI() - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

getInitialDeviations() - Method in class yawn.nn.appart.AppArt

getInitialDeviations() - Method in class yawn.nn.appart.AppArtConfig

getInnerCircleRadius() - Method in class yawn.envs.synthetic.CircleInTheSquareEnvironment

getInputSize() - Method in class yawn.envs.plaintext.PlainTextEnvironment

getInputSize() - Method in class yawn.nn.appart.AppArt

getInputSize() - Method in class yawn.nn.appart.AppArtConfig

getInputSize() - Method in class yawn.nn.appart.PredictionNeuralNode

getInputSize() - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

getInputSize() - Method in class yawn.nn.committee.NetworkCommittee

getInputSize() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getInputSize() - Method in class yawn.nn.Layer

getInputSize() - Method in class yawn.nn.mlp.MultiLayerPerceptron

getInputSize() - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

getInputSize() - Method in class yawn.nn.NeuralNetwork

getInputSize() - Method in class yawn.nn.NeuralNode

getInputSize() - Method in class yawn.optim.genetic.GeneticParameterFitter

getLambda() - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

getLayer(int) - Method in class yawn.nn.mlp.MultiLayerPerceptron

getLayerConfigs() - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

getLayerConfigs() - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

getLayers() - Method in class yawn.nn.mlp.MultiLayerPerceptron

getLearningRate() - Method in class yawn.nn.appart.AppArt

getLearningRate() - Method in class yawn.nn.appart.AppArtConfig

getLearningRate() - Method in class yawn.nn.mlp.MultiLayerPerceptron

getLearningRate() - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

getLearningRate() - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

getMatchCritetionValue() - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

getMatchError() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getMatchError() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

getMaxEpochs() - Method in class yawn.nn.appart.AppArt

getMaxEpochs() - Method in class yawn.nn.appart.AppArtConfig

getMaxEpochs() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getMaxEpochs() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

getMaxEpochs() - Method in class yawn.nn.mlp.MultiLayerPerceptron

getMaxEpochs() - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

getMaxEpochs() - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

getMaxGenerations() - Method in class yawn.optim.genetic.GeneticParameterFitter

getMaxGenerations() - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

getMaxWeightValue() - Method in class yawn.nn.mlp.PerceptronNode

getMinWeightValue() - Method in class yawn.nn.mlp.PerceptronNode

getModeltoBeFittedConfig() - Method in class yawn.optim.genetic.GeneticParameterFitter

getModeltoBeFittedConfig() - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

getMomentumRate() - Method in class yawn.nn.mlp.MultiLayerPerceptron

getMomentumRate() - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

getMomentumRate() - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

getMu() - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

getMu(int) - Method in class yawn.nn.gasart.GasRecognitionNode

getNetworkConfig() - Method in class yawn.nn.committee.CommitteeElement

getNeuralNetwork() - Method in class yawn.io.Experiment

getNeuralNetworkName() - Method in class yawn.nn.appart.AppArt

getNeuralNetworkName() - Method in class yawn.nn.committee.NetworkCommittee

getNeuralNetworkName() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getNeuralNetworkName() - Method in class yawn.nn.mlp.MultiLayerPerceptron

getNeuralNetworkName() - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

getNeuralNetworkName() - Method in class yawn.nn.NeuralNetwork

Returns a human readable

getNeuralNetworkName() - Method in class yawn.optim.genetic.GeneticParameterFitter

getNodes() - Method in class yawn.nn.appart.PredictionLayer

getNodes() - Method in class yawn.nn.Layer

getNodesClassFullName() - Method in class yawn.nn.mlp.LayerConfig

getNodesClassName() - Method in class yawn.nn.mlp.LayerElement

getNormalizedActivations() - Method in class yawn.nn.appart.RecognitionLayer

getNumberOfArtACategories() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getNumberOfArtBCategories() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getNumberOfCommitedNodes() - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

getNumberOfInputs() - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

getNumberOfMismatches() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getNumberOfSystemRuns() - Method in class yawn.envs.delve.DelveEnvironment

getNumberOfSystemRuns() - Method in class yawn.envs.Environment

Returns the number of times the system will be run.

getNumberOfSystemRuns() - Method in class yawn.envs.plaintext.PlainTextEnvironment

getNumberOfSystemRuns() - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

getOutputSize() - Method in class yawn.envs.plaintext.PlainTextEnvironment

getOutputSize() - Method in class yawn.nn.appart.AppArt

getOutputSize() - Method in class yawn.nn.appart.AppArtConfig

getOutputSize() - Method in class yawn.nn.committee.NetworkCommittee

getOutputSize() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getOutputSize() - Method in class yawn.nn.mlp.MultiLayerPerceptron

getOutputSize() - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

getOutputSize() - Method in class yawn.nn.NeuralNetwork

getOutputSize() - Method in class yawn.optim.genetic.GeneticParameterFitter

getPopulationSize() - Method in class yawn.optim.genetic.GeneticParameterFitter

getPopulationSize() - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

getPredictionError() - Method in class yawn.nn.appart.AppArt

getPredictionError() - Method in class yawn.nn.appart.AppArtConfig

getPredictionError() - Method in class yawn.nn.mlp.MultiLayerPerceptron

getPredictionError() - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

getPredictionError() - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

getPredictionLayer() - Method in class yawn.nn.appart.AppArt

getPredictionLayerLearningRate() - Method in class yawn.nn.appart.AppArt

getPredictionLayerLearningRate() - Method in class yawn.nn.appart.AppArtConfig

getPredictions(NeuralNetwork, InputOutputPattern[]) - Method in class yawn.util.DefaultStatisticsFacility

getPreserveFittestIndividual() - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

getProblemDirectory() - Method in class yawn.envs.delve.DelveEnvironment

getRepositoryDir() - Method in class yawn.io.xml.XmlContext

getResultsDirectory() - Method in class yawn.envs.delve.DelveEnvironment

getResultsFileName() - Method in class yawn.envs.plaintext.PlainTextEnvironment

getRootSerializationClass() - Method in class yawn.io.xml.XmlContext

getSampleChromosome() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapJGapAdapter

getSampleChromosome() - Method in class yawn.optim.genetic.JGapAdapter

Returns a valid sample org.jgap.Chromosome to be used for optimization

getSerializer() - Method in class yawn.io.xml.XmlContext

getSigma() - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

getSize() - Method in class yawn.nn.mlp.LayerConfig

getSize() - Method in class yawn.nn.mlp.LayerElement

getSquareDimension() - Method in class yawn.envs.synthetic.CircleInTheSquareEnvironment

getStatisticsFacility() - Method in class yawn.nn.NeuralNetwork

getTemplateConfig() - Method in class yawn.optim.genetic.JGapAdapter

getTestDataset(int) - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

getTestDatasetInputs(int) - Method in class yawn.envs.delve.DelveEnvironment

Reads a test data file from a DELVE directory.

getTestDatasetInputs(int) - Method in class yawn.envs.Environment

Reads a test dataset from the environment.

getTestDatasetInputs(int) - Method in class yawn.envs.plaintext.PlainTextEnvironment

getTestDatasetInputs(int) - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

getTestExpectedOutputsSet(int) - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

getTestMatchVigilance() - Method in class yawn.nn.appart.AppArt

getTestMatchVigilance() - Method in class yawn.nn.appart.AppArtConfig

getTestSetSize() - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

getThreshold() - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

getTrainingDataset(int) - Method in class yawn.envs.delve.DelveEnvironment

Reads a train file from a DELVE directory.

getTrainingDataset(int) - Method in class yawn.envs.Environment

Reads a train file from the environment.

getTrainingDataset(int) - Method in class yawn.envs.plaintext.PlainTextEnvironment

getTrainingDataset(int) - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

getTrainingSet() - Method in class yawn.optim.genetic.JGapAdapter

getTrainMatchVigilance() - Method in class yawn.nn.appart.AppArt

getTrainMatchVigilance() - Method in class yawn.nn.appart.AppArtConfig

getTrainSetSize() - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

getTrainToTestRatio() - Method in class yawn.envs.plaintext.PlainTextEnvironment

getUnits() - Method in class yawn.nn.gasart.GasRecognitionLayer

getVerAX() - Method in class yawn.nn.gasart.GasEdge

getVerAY() - Method in class yawn.nn.gasart.GasEdge

getVerBX() - Method in class yawn.nn.gasart.GasEdge

getVerBY() - Method in class yawn.nn.gasart.GasEdge

getVigilanceArtA() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getVigilanceArtA() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

getVigilanceArtB() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

getVigilanceArtB() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

getVigilanceParameter() - Method in class yawn.nn.appart.GainControlUnit

getVigilanceParameter() - Method in class yawn.nn.appart.GainControlUnitOnMatching

getVigilanceParameter() - Method in class yawn.nn.appart.GainControlUnitOnOutput

getWeights() - Method in class yawn.nn.appart.PredictionNeuralNode

getWeights() - Method in class yawn.nn.mlp.PerceptronNode

getWeightVector(int) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

getY() - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

GUESS_FILE_NAME - Static variable in class yawn.envs.delve.DelveEnvironment

H

hasIncreased - Variable in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

hasIncreased() - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

I

IContext - Interface in yawn.io

$Id: IContext.java,v 1.3 2005/04/07 17:28:25 supermarti Exp $

increaseSize() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

incResource(double) - Method in class yawn.nn.gasart.GasRecognitionNode

init() - Method in class yawn.envs.delve.DelveEnvironment

init() - Method in class yawn.envs.plaintext.PlainTextEnvironment

init() - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

init() - Method in class yawn.nn.appart.AppArt

init() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

init() - Method in class yawn.nn.mlp.MultiLayerPerceptron

initialDeviations - Variable in class yawn.nn.appart.AppArt

initialDeviations - Variable in class yawn.nn.appart.AppArtConfig

innerCircleRadius - Variable in class yawn.envs.synthetic.CircleInTheSquareEnvironment

innerProduct(Pattern) - Method in class yawn.util.Pattern

Calculates the inner product of two Patterns.

input - Variable in class yawn.nn.InputLayer

input - Variable in class yawn.nn.NeuralNode

input - Variable in class yawn.util.InputOutputPattern

inputLayer - Variable in class yawn.nn.appart.AppArt

InputLayer - Class in yawn.nn

An input (more or less dummy) layer.

InputLayer() - Constructor for class yawn.nn.InputLayer

InputLayer(Layer, int) - Constructor for class yawn.nn.InputLayer

InputOutputPattern - Class in yawn.util

An (Input,Output) pair.

InputOutputPattern(int, int) - Constructor for class yawn.util.InputOutputPattern

inputSize - Variable in class yawn.envs.delve.DelveEnvironment

inputSize() - Method in class yawn.envs.delve.DelveEnvironment

inputSize() - Method in class yawn.envs.Environment

inputSize - Variable in class yawn.envs.plaintext.PlainTextEnvironment

inputSize() - Method in class yawn.envs.plaintext.PlainTextEnvironment

inputSize() - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

inputSize - Variable in class yawn.nn.appart.RecognitionLayer

inputSize - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

inputSize - Variable in class yawn.nn.Layer

inputSize - Variable in class yawn.nn.NeuralNode

inputSpace - Static variable in class yawn.envs.synthetic.XOrDataEnvironment

insert(Object, String) - Method in interface yawn.io.IStorage

Inserts an instance of a IPersistent implementor in the underlying storage.

insert(Object, String) - Method in class yawn.io.xml.XmlStorage

inserted - Variable in class yawn.nn.gasart.GasRecognitionNode

internalValidate() - Method in class yawn.config.NeuralNetworkConfig

internalValidate() - Method in class yawn.nn.appart.AppArtConfig

internalValidate() - Method in class yawn.nn.committee.NetworkCommitteeConfig

internalValidate() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

internalValidate() - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

internalValidate() - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

internalValidate() - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

isAdapting() - Method in class yawn.nn.Layer

isAdapting() - Method in class yawn.nn.NeuralNetwork

isAutoCreateReposotory() - Method in class yawn.io.xml.XmlContext

isDebug() - Method in class yawn.ui.cli.RunExperiment

ISerializer - Interface in yawn.io.serialization

Abstract class for serializing objects.

isMatchTrackingOneShot() - Method in class yawn.nn.appart.AppArt

isMatchTrackingOneShot() - Method in class yawn.nn.appart.AppArtConfig

isOverwriteExisting() - Method in class yawn.io.xml.XmlContext

isOverwriteResults() - Method in class yawn.envs.plaintext.PlainTextEnvironment

isPreserveFittestIndividual() - Method in class yawn.optim.genetic.GeneticParameterFitter

isPreserveFittestIndividual() - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

isSerialProcessing() - Method in class yawn.nn.committee.NetworkCommittee

isSerialProcessing() - Method in class yawn.nn.committee.NetworkCommitteeConfig

isSuperClass(Class, Class) - Static method in class yawn.util.MiscUtils

tests if a java.lang.Class instance is a superclass of other

IStorage - Interface in yawn.io

A storage of instances of IPersistent sub-classes.

isUseAbsoluteError() - Method in class yawn.nn.appart.AppArt

isUseAbsoluteError() - Method in class yawn.nn.appart.AppArtConfig

isUseComplementCoding() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

isUseComplementCoding() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

isVerbose() - Method in class yawn.ui.cli.RunExperiment

isWelcomeMsgEnabled() - Method in class yawn.ui.cli.RunExperiment

J

JGapAdapter - Class in yawn.optim.genetic

This is yawn.optim.JGapAdapter, part of the yawn project.

JGapAdapter(NeuralNetworkConfig) - Constructor for class yawn.optim.genetic.JGapAdapter

K

KeyNotPresentException - Exception in yawn.io

$Id: KeyNotPresentException.java,v 1.3 2005/04/07 17:28:25 supermarti Exp $

KeyNotPresentException() - Constructor for exception yawn.io.KeyNotPresentException

KeyNotPresentException(String) - Constructor for exception yawn.io.KeyNotPresentException

KeyNotPresentException(String, Throwable) - Constructor for exception yawn.io.KeyNotPresentException

KeyNotPresentException(Throwable) - Constructor for exception yawn.io.KeyNotPresentException

L

lambda - Variable in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

Layer - Class in yawn.nn

A layer of neurons $Id: Layer.java,v 1.8 2005/04/07 17:28:28 supermarti Exp $

Layer() - Constructor for class yawn.nn.Layer

Layer(Layer, int) - Constructor for class yawn.nn.Layer

LayerConfig - Class in yawn.nn.mlp

$Id: LayerConfig.java,v 1.5 2005/04/07 17:28:07 supermarti Exp $

LayerConfig() - Constructor for class yawn.nn.mlp.LayerConfig

LayerConfig(String, int) - Constructor for class yawn.nn.mlp.LayerConfig

layerConfigs - Variable in class yawn.nn.mlp.MultiLayerPerceptronConfig

layerConfigs - Variable in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

LayerElement - Class in yawn.nn.mlp

$Id: LayerElement.java,v 1.4 2005/04/07 17:28:07 supermarti Exp $

LayerElement() - Constructor for class yawn.nn.mlp.LayerElement

LayerElement(String, int) - Constructor for class yawn.nn.mlp.LayerElement

layers - Variable in class yawn.nn.mlp.MultiLayerPerceptron

layersCount() - Method in class yawn.nn.mlp.MultiLayerPerceptron

layersIterator() - Method in class yawn.nn.mlp.MultiLayerPerceptron

layersListIterator() - Method in class yawn.nn.mlp.MultiLayerPerceptron

learn(Pattern) - Method in class yawn.nn.appart.AppArt

learn(Pattern) - Method in class yawn.nn.appart.PredictionLayer

learn(double) - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

learn() - Method in class yawn.nn.appart.RecognitionLayer

learn() - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

learn(Pattern) - Method in class yawn.nn.gasart.GasArt

learn() - Method in class yawn.nn.gasart.GasRecognitionLayer

learn(double) - Method in class yawn.nn.gasart.GasRecognitionNode

learningRate - Variable in class yawn.nn.appart.AppArt

learningRate - Variable in class yawn.nn.appart.AppArtConfig

learningRate - Variable in class yawn.nn.mlp.MultiLayerPerceptron

learningRate - Variable in class yawn.nn.mlp.MultiLayerPerceptronConfig

learningRate - Variable in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

learnNewCategory(Pattern) - Method in class yawn.nn.appart.AppArt

learnNewCategory(Pattern) - Method in class yawn.nn.gasart.GasArt

learnNewClass(Pattern, int) - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

Sets up the node to exactly represents the class specified by the current input.

learnNewClass(Pattern, int) - Method in class yawn.nn.gasart.GasRecognitionNode

length() - Method in class yawn.nn.gasart.GasEdge

LinearNode - Class in yawn.nn.mlp

A linear output node.

LinearNode(int) - Constructor for class yawn.nn.mlp.LinearNode

LinearNode() - Constructor for class yawn.nn.mlp.LinearNode

loadInputOutputFile(String, int) - Method in class yawn.envs.delve.DelveEnvironment

Reads a file in DELVE format.

loadInputOutputFile(String) - Method in class yawn.envs.plaintext.PlainTextEnvironment

log - Static variable in class yawn.envs.synthetic.SyntheticDataEnvironment

M

main(String[]) - Static method in class yawn.ui.cli.RunExperiment

makeCentralAdapIncAgeDelOld(GasRecognitionNode) - Method in class yawn.nn.gasart.GasArt

makeFstSndBMUConexion(Pattern) - Method in class yawn.nn.gasart.GasArt

makeNewCategory() - Method in class yawn.nn.appart.RecognitionLayer

makeNewCategory() - Method in class yawn.nn.gasart.GasRecognitionLayer

makeNewEdge(GasRecognitionNode, GasRecognitionNode) - Method in class yawn.nn.gasart.GasArt

match - Variable in class yawn.nn.appart.GainControlUnitOnMatching

matchError - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

max difference between desired output and prediction to be counted as error

matching() - Method in class yawn.nn.appart.RecognitionLayer

matching() - Method in class yawn.nn.gasart.GasRecognitionLayer

matchTrackingOneShot - Variable in class yawn.nn.appart.AppArt

matchTrackingOneShot - Variable in class yawn.nn.appart.AppArtConfig

maxAge - Variable in class yawn.nn.gasart.GasArt

maxEpochs - Variable in class yawn.nn.appart.AppArt

maxEpochs - Variable in class yawn.nn.appart.AppArtConfig

maxEpochs - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

max number of passes through the training set

maxEpochs - Variable in class yawn.nn.mlp.MultiLayerPerceptron

maxEpochs - Variable in class yawn.nn.mlp.MultiLayerPerceptronConfig

maxEpochs - Variable in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

maxEpochs - Variable in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

maxGenerations - Variable in class yawn.optim.genetic.GeneticParameterFitter

maxGenerations - Variable in class yawn.optim.genetic.GeneticParameterFitterConfig

maxLearningRate - Variable in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

maxWeightValue - Variable in class yawn.nn.mlp.PerceptronNode

meanSquaredError(InputOutputPattern[], Pattern[]) - Method in class yawn.util.DefaultStatisticsFacility

meanSquaredError(Pattern[], Pattern[]) - Static method in class yawn.util.ErrorUtils

minimumActivationMatchTracking() - Method in class yawn.nn.appart.GainControlUnitOnMatching

minWeightValue - Variable in class yawn.nn.mlp.PerceptronNode

MiscUtils - Class in yawn.util

This is yawn.util.MiscUtils, part of the yawn project.

MiscUtils() - Constructor for class yawn.util.MiscUtils

MLPLayer - Class in yawn.nn.mlp

This a layer is meant to be used in a Multi-Layer Perceptron.

MLPLayer(Layer, int, int, Class) - Constructor for class yawn.nn.mlp.MLPLayer

modeltoBeFittedConfig - Variable in class yawn.optim.genetic.GeneticParameterFitter

modeltoBeFittedConfig - Variable in class yawn.optim.genetic.GeneticParameterFitterConfig

momentum - Variable in class yawn.nn.mlp.PerceptronNode

momentumRate - Variable in class yawn.nn.mlp.MultiLayerPerceptron

momentumRate - Variable in class yawn.nn.mlp.MultiLayerPerceptronConfig

momentumRate - Variable in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

mu - Variable in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

MultiLayerPerceptron - Class in yawn.nn.mlp

A multi-layer perceptron with backpropagation of errors learning.

MultiLayerPerceptron() - Constructor for class yawn.nn.mlp.MultiLayerPerceptron

MultiLayerPerceptronConfig - Class in yawn.nn.mlp

A configuration class for the MultiLayerPerceptron class.

MultiLayerPerceptronConfig() - Constructor for class yawn.nn.mlp.MultiLayerPerceptronConfig

multiply(double) - Method in class yawn.util.Pattern

Scalar multipication.

N

neighborFact - Variable in class yawn.nn.gasart.GasArt

net - Variable in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

netInput() - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

netInput(Pattern) - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

network - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

NetworkCommittee - Class in yawn.nn.committee

A committe or set of neural networks to be trained and used concurrently to provide a consistent learning experiment and predictions.

NetworkCommittee() - Constructor for class yawn.nn.committee.NetworkCommittee

NetworkCommittee(CommitteeFunction) - Constructor for class yawn.nn.committee.NetworkCommittee

NetworkCommittee.TrainRunner - Class in yawn.nn.committee

Utility class for multi-threaded training of neural networks.

NetworkCommittee.TrainRunner(NeuralNetwork, InputOutputPattern[]) - Constructor for class yawn.nn.committee.NetworkCommittee.TrainRunner

NetworkCommitteeConfig - Class in yawn.nn.committee

This is yawn.nn.committee.NetworkCommitteeConfig, part of the yawn project.

NetworkCommitteeConfig() - Constructor for class yawn.nn.committee.NetworkCommitteeConfig

networkConfig - Variable in class yawn.nn.committee.CommitteeElement

neuralNetwork - Variable in class yawn.io.Experiment

NeuralNetwork - Class in yawn.nn

An abstract neural network $Id: NeuralNetwork.java,v 1.8 2005/04/07 17:28:28 supermarti Exp $

NeuralNetwork() - Constructor for class yawn.nn.NeuralNetwork

NeuralNetworkConfig - Class in yawn.config

This is yawn.nn.NeuralNetworkConfig, part of the yawn project.

NeuralNetworkConfig() - Constructor for class yawn.config.NeuralNetworkConfig

NeuralNode - Class in yawn.nn

An abstract neural node.

NeuralNode(int) - Constructor for class yawn.nn.NeuralNode

nextLayer - Variable in class yawn.nn.Layer

nodesClassFullName - Variable in class yawn.nn.mlp.LayerConfig

nodesClassName - Variable in class yawn.nn.mlp.LayerElement

norm1() - Method in class yawn.util.Pattern

Calculates a norm1 (sum of absolute values) of the Pattern.

norm2() - Method in class yawn.util.Pattern

Calculates a norm2 (square root of the sum of the squared values) of the Pattern.

normalizedActivations - Variable in class yawn.nn.appart.RecognitionLayer

normDone - Variable in class yawn.nn.appart.RecognitionLayer

numberOfF2Nodes() - Method in class yawn.nn.appart.AppArt

numberOfSystemRuns - Variable in class yawn.envs.plaintext.PlainTextEnvironment

numberOfSystemRuns - Variable in class yawn.envs.synthetic.SyntheticDataEnvironment

numberUsedNodes - Variable in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

O

ONE_PAT - Static variable in class yawn.envs.synthetic.CircleInTheSquareEnvironment

ONE_PAT - Static variable in class yawn.envs.synthetic.XOrDataEnvironment

oneLearningStep(Pattern, Pattern) - Method in class yawn.nn.appart.AppArt

oneLearningStep(Pattern, Pattern) - Method in class yawn.nn.committee.NetworkCommittee

this has no sense in this context, throws an UnsupportedOperationException by default.

oneLearningStep(Pattern, Pattern) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

oneLearningStep(Pattern, Pattern) - Method in class yawn.nn.mlp.MultiLayerPerceptron

Implements a learning iteration as: propagates the input storing the activation of all nodes; sums in errorSum the mean square error of the prediction; calculation of the deltas; backpropagation of errors, and; weights update.

oneLearningStep(Pattern, Pattern) - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

oneLearningStep(Pattern, Pattern) - Method in class yawn.nn.NeuralNetwork

Performs one learning iteration.

oneLearningStep(Pattern, Pattern) - Method in class yawn.optim.genetic.GeneticParameterFitter

oneShotMatchTracking() - Method in class yawn.nn.appart.GainControlUnitOnMatching

OptimizableModel - Interface in yawn.optim

Models that could have their parameters $Id: OptimizableModel.java,v 1.4 2005/04/05 16:30:43 supermarti Exp $

OptimizationAdapter - Interface in yawn.optim

This is yawn.optim.OptimizationAdapter, part of the yawn project.

output() - Method in class yawn.nn.Layer

output() - Method in class yawn.nn.NeuralNode

output - Variable in class yawn.util.InputOutputPattern

outputGainControl - Variable in class yawn.nn.appart.AppArt

outputLayer - Variable in class yawn.nn.appart.AppArt

OutputLayer - Class in yawn.nn

An output layer.

OutputLayer(int) - Constructor for class yawn.nn.OutputLayer

outputSize - Variable in class yawn.envs.delve.DelveEnvironment

outputSize() - Method in class yawn.envs.delve.DelveEnvironment

outputSize() - Method in class yawn.envs.Environment

outputSize - Variable in class yawn.envs.plaintext.PlainTextEnvironment

outputSize() - Method in class yawn.envs.plaintext.PlainTextEnvironment

outputSize() - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

outputSize - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

overwriteResults - Variable in class yawn.envs.plaintext.PlainTextEnvironment

P

ParamerFitter - Class in yawn.optim

This is yawn.optim.ParamerFitter, part of the yawn project.

ParamerFitter() - Constructor for class yawn.optim.ParamerFitter

parsed - Variable in class yawn.envs.delve.DelveEnvironment

parsePattern(String) - Static method in class yawn.util.Pattern

Parses a String into a Pattern.

Pattern - Class in yawn.util

A pattern (or vector or stimuli) of real numbers (double).

Pattern() - Constructor for class yawn.util.Pattern

Creates a zero elements Pattern.

Pattern(double[]) - Constructor for class yawn.util.Pattern

Creates a Pattern whose elements are copied from source.

Pattern(int) - Constructor for class yawn.util.Pattern

Creates a Pattern of the desired size initialized to zero.

Pattern(Pattern) - Constructor for class yawn.util.Pattern

Creates a Pattern whose elements are copied from source.

penalize() - Method in class yawn.nn.gasart.GasArt

PerceptronNode - Class in yawn.nn.mlp

This is part of the yawn project.

PerceptronNode(int) - Constructor for class yawn.nn.mlp.PerceptronNode

PerceptronNode() - Constructor for class yawn.nn.mlp.PerceptronNode

piecewise(double[]) - Method in class yawn.nn.committee.functions.Average

piecewise(double[]) - Method in class yawn.nn.committee.functions.CommitteeFunction

Computes the value of an output feature of a committe.

piecewise(double[]) - Method in class yawn.nn.committee.functions.Popularity

PlainTextEnvironment - Class in yawn.envs.plaintext

This is part of the yawn project.

PlainTextEnvironment() - Constructor for class yawn.envs.plaintext.PlainTextEnvironment

Popularity - Class in yawn.nn.committee.functions

$Id: Popularity.java,v 1.4 2005/04/07 17:28:30 supermarti Exp $

Popularity() - Constructor for class yawn.nn.committee.functions.Popularity

populationSize - Variable in class yawn.optim.genetic.GeneticParameterFitter

populationSize - Variable in class yawn.optim.genetic.GeneticParameterFitterConfig

position() - Method in class yawn.nn.gasart.GasRecognitionNode

predict(Pattern) - Method in class yawn.nn.appart.AppArt

predict(Pattern) - Method in class yawn.nn.committee.NetworkCommittee

predict(Pattern) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

predict(Pattern) - Method in class yawn.nn.mlp.MultiLayerPerceptron

predict(Pattern) - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

predict(Pattern) - Method in class yawn.nn.NeuralNetwork

Computes a network prediction

predict(Pattern) - Method in class yawn.optim.genetic.GeneticParameterFitter

predictionError - Variable in class yawn.nn.appart.AppArt

predictionError - Variable in class yawn.nn.appart.AppArtConfig

predictionError - Variable in class yawn.nn.mlp.MultiLayerPerceptron

predictionError - Variable in class yawn.nn.mlp.MultiLayerPerceptronConfig

predictionError - Variable in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

predictionError - Variable in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

predictionLayer - Variable in class yawn.nn.appart.AppArt

PredictionLayer - Class in yawn.nn.appart

A prediction (P) layer for AppART neural networks.

PredictionLayer(int, double, OutputLayer) - Constructor for class yawn.nn.appart.PredictionLayer

predictionLayerLearningRate - Variable in class yawn.nn.appart.AppArt

predictionLayerLearningRate - Variable in class yawn.nn.appart.AppArtConfig

PredictionNeuralNode - Class in yawn.nn.appart

A prediction layer node.

prepareConfig() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapJGapAdapter

prepareFile(String) - Method in class yawn.io.xml.XmlStorage

preserveFittestIndividual - Variable in class yawn.optim.genetic.GeneticParameterFitter

preserveFittestIndividual - Variable in class yawn.optim.genetic.GeneticParameterFitterConfig

printErrorMessage(String) - Static method in class yawn.ui.cli.RunExperiment

printHelpMessage(String, Options) - Static method in class yawn.ui.cli.RunExperiment

problemDirectory - Variable in class yawn.envs.delve.DelveEnvironment

propagate(Pattern) - Method in class yawn.nn.appart.AppArt

Propagates the input already already presented to the network (by calling setInput())

propagate(double[][]) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

propagate() - Method in class yawn.nn.gasart.GasRecognitionLayer

propagateToNextLayer() - Method in class yawn.nn.appart.PredictionLayer

propagateToNextLayer() - Method in class yawn.nn.appart.RecognitionLayer

Propagates the normalizedActivations to a prediction layer.

propagateToNextLayer() - Method in class yawn.nn.Layer

propagateToNextLayer() - Method in class yawn.nn.OutputLayer

propagateToNode(int) - Method in class yawn.nn.InputLayer

R

RadialBasisFunctionsNeuralNode - Class in yawn.nn.appart

A classifier (extended RBF) node intended for the recognition (F2) layer of a AppART network.

RadialBasisFunctionsNeuralNode(int, double, int) - Constructor for class yawn.nn.appart.RadialBasisFunctionsNeuralNode

randomize(double, double) - Method in class yawn.util.Pattern

Randomizes this Pattern with values bounded by min and max.

randomOrderList(InputOutputPattern[]) - Static method in class yawn.util.InputOutputPattern

RecognitionLayer - Class in yawn.nn.appart

A recognition (F2) layer for AppART neural networks.

RecognitionLayer(Layer, GainControlUnitOnMatching, int) - Constructor for class yawn.nn.appart.RecognitionLayer

removeLayer(int) - Method in class yawn.nn.mlp.MultiLayerPerceptron

reset() - Method in class yawn.nn.appart.AppArt

reset() - Method in class yawn.nn.appart.PredictionLayer

reset() - Method in class yawn.nn.appart.RecognitionLayer

reset() - Method in class yawn.nn.Layer

reset() - Method in class yawn.nn.NeuralNode

resets the current activation.

resetActivation - Variable in class yawn.nn.gasart.GasRecognitionNode

resetCategory(int) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

resource - Variable in class yawn.nn.gasart.GasRecognitionNode

resultsDirectory - Variable in class yawn.envs.delve.DelveEnvironment

resultsFileName - Variable in class yawn.envs.plaintext.PlainTextEnvironment

rho - Variable in class yawn.nn.appart.GainControlUnit

rho - Variable in class yawn.nn.appart.GainControlUnitOnMatching

rho - Variable in class yawn.nn.appart.GainControlUnitOnOutput

rhoMin - Variable in class yawn.nn.appart.GainControlUnitOnMatching

rhoMin - Variable in class yawn.nn.appart.GainControlUnitOnOutput

run() - Method in class yawn.nn.committee.NetworkCommittee.TrainRunner

run() - Method in class yawn.ui.cli.RunExperiment

RunExperiment - Class in yawn.ui.cli

Trains and tests a neural network using a given test environment.

RunExperiment() - Constructor for class yawn.ui.cli.RunExperiment

S

scaleZeroOneInput(Pattern) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

scaleZeroOneTrainingDataSet(InputOutputPattern[]) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

second - Variable in class yawn.nn.gasart.GasRecognitionNode

SerializationException - Exception in yawn.io.serialization

Thrown when an exception occurs when serializing/de-serializing neural networks configuration.

SerializationException() - Constructor for exception yawn.io.serialization.SerializationException

SerializationException(String) - Constructor for exception yawn.io.serialization.SerializationException

SerializationException(Throwable) - Constructor for exception yawn.io.serialization.SerializationException

SerializationException(String, Throwable) - Constructor for exception yawn.io.serialization.SerializationException

serialize(Object, OutputStreamWriter) - Method in interface yawn.io.serialization.ISerializer

Serializes an object.

serialize(Object, OutputStreamWriter) - Method in class yawn.io.serialization.xml.BetwixtXmlSerializer

serialize(Object, OutputStreamWriter) - Method in class yawn.io.serialization.xml.CastorXmlSerializer

serializeObject(Object, File) - Method in class yawn.io.xml.XmlStorage

serialProcessing - Variable in class yawn.nn.committee.NetworkCommittee

serialProcessing - Variable in class yawn.nn.committee.NetworkCommitteeConfig

setActivation(double) - Method in class yawn.nn.gasart.GasRecognitionNode

setAdapting(boolean) - Method in class yawn.nn.appart.AppArt

setAdapting(boolean) - Method in class yawn.nn.Layer

setAdapting(boolean) - Method in class yawn.nn.NeuralNetwork

If set to true puts the network in adapting (training) mode; false puts the network in static or frozen (testing) mode.

setAllComponents(double) - Method in class yawn.util.Pattern

Sets all Pattern elements to value.

setAlphaArtA(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setAlphaArtA(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

setAlphaArtB(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setAlphaArtB(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

setAmount(int) - Method in class yawn.nn.committee.CommitteeElement

setAutoCreateReposotory(boolean) - Method in class yawn.io.xml.XmlContext

setBaseArtAVigilance(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setBetaArtA(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setBetaArtA(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

setBetaArtB(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setBetaArtB(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

setBindedNetworkClass(Class) - Method in class yawn.config.NeuralNetworkConfig

By default throws java.lang.UnsupportedOperationException.

setCategoryIndex(int) - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

setCombinationFunction(CommitteeFunction) - Method in class yawn.nn.committee.NetworkCommittee

setCombinationFunctionClassName(Class) - Method in class yawn.nn.committee.NetworkCommitteeConfig

setCommitteeElements(List) - Method in class yawn.nn.committee.NetworkCommitteeConfig

setComponent(double, int) - Method in class yawn.util.Pattern

Sets element of index i to value.

setComponents(Pattern) - Method in class yawn.util.Pattern

Sets elements to the ones of orig.

setContext(IContext) - Method in class yawn.io.Experiment

setContext(IContext) - Method in interface yawn.io.IStorage

setContext(IContext) - Method in class yawn.io.xml.XmlStorage

setDataFileName(String) - Method in class yawn.envs.plaintext.PlainTextEnvironment

setDebug(boolean) - Method in class yawn.ui.cli.RunExperiment

setDesiredMeanSquaredError(double) - Method in class yawn.nn.appart.AppArt

setDesiredMeanSquaredError(double) - Method in class yawn.nn.appart.AppArtConfig

setE(double) - Method in class yawn.nn.appart.PredictionNeuralNode

setElementSeparator(String) - Method in class yawn.envs.plaintext.PlainTextEnvironment

setEnvironment(Environment) - Method in class yawn.config.NeuralNetworkConfig

setEnvironment(Environment) - Method in class yawn.io.Experiment

setEnvironment(Environment) - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

setEpsilon(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setEpsilon(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

setEta(double) - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

setEvalSet(InputOutputPattern[]) - Method in class yawn.optim.genetic.JGapAdapter

setExperimentFileName(String) - Method in class yawn.ui.cli.RunExperiment

setF2GainControl(GainControlUnitOnMatching) - Method in class yawn.nn.appart.AppArt

setF2Layer(RecognitionLayer) - Method in class yawn.nn.appart.AppArt

setFileNameSuffix(String) - Method in class yawn.io.xml.XmlContext

setFittedModel(NeuralNetwork) - Method in class yawn.optim.genetic.GeneticParameterFitter

setGF2(GainControlUnitOnMatching) - Method in class yawn.nn.appart.RecognitionLayer

setIncreasedFlag(boolean) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

setInitialDeviations(Pattern) - Method in class yawn.nn.appart.AppArt

setInitialDeviations(Pattern) - Method in class yawn.nn.appart.AppArtConfig

setInnerCircleRadius(double) - Method in class yawn.envs.synthetic.CircleInTheSquareEnvironment

setInput(Pattern) - Method in class yawn.nn.appart.AppArt

setInput(Pattern) - Method in class yawn.nn.appart.PredictionLayer

setInput(Pattern) - Method in class yawn.nn.appart.RecognitionLayer

setInput(double, int) - Method in class yawn.nn.gasart.GasRecognitionNode

setInput(Pattern) - Method in class yawn.nn.InputLayer

setInput(Pattern) - Method in class yawn.nn.Layer

setInput(Pattern) - Method in class yawn.nn.mlp.MLPLayer

Does the `threshold as weight' trick.

setInput(Pattern) - Method in class yawn.nn.NeuralNode

sets the current input of the node

setInputElement(double, int) - Method in class yawn.nn.NeuralNode

setInputPattern(double[]) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

setInputSize(int) - Method in class yawn.envs.plaintext.PlainTextEnvironment

setInputSize(int) - Method in class yawn.nn.Layer

setInputSize(int) - Method in class yawn.nn.mlp.PerceptronNode

setInputSize(int) - Method in class yawn.nn.NeuralNode

setLambda(Pattern) - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

setLayerConfigs(List) - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

setLayerConfigs(List) - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

setLayers(List) - Method in class yawn.nn.mlp.MultiLayerPerceptron

setLearningRate(double) - Method in class yawn.nn.appart.AppArt

setLearningRate(double) - Method in class yawn.nn.appart.AppArtConfig

setLearningRate(double) - Method in class yawn.nn.appart.PredictionLayer

setLearningRate(double) - Method in class yawn.nn.mlp.MultiLayerPerceptron

setLearningRate(double) - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

setLearningRate(double) - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

setMatch(boolean) - Method in class yawn.nn.appart.GainControlUnitOnMatching

setMatchError(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setMatchError(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

setMatchTrackingOneShot(boolean) - Method in class yawn.nn.appart.AppArt

setMatchTrackingOneShot(boolean) - Method in class yawn.nn.appart.AppArtConfig

setMaxEpochs(long) - Method in class yawn.nn.appart.AppArt

setMaxEpochs(long) - Method in class yawn.nn.appart.AppArtConfig

setMaxEpochs(int) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setMaxEpochs(int) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

setMaxEpochs(long) - Method in class yawn.nn.mlp.MultiLayerPerceptron

setMaxEpochs(long) - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

setMaxEpochs(long) - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

setMaxGenerations(int) - Method in class yawn.optim.genetic.GeneticParameterFitter

setMaxGenerations(int) - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

setMaxWeightValue(double) - Method in class yawn.nn.mlp.PerceptronNode

setMinWeightValue(double) - Method in class yawn.nn.mlp.PerceptronNode

setModeltoBeFittedConfig(NeuralNetworkConfig) - Method in class yawn.optim.genetic.GeneticParameterFitter

setModeltoBeFittedConfig(NeuralNetworkConfig) - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

setMomentumRate(double) - Method in class yawn.nn.mlp.MultiLayerPerceptron

setMomentumRate(double) - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

setMomentumRate(double) - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

setMu(Pattern) - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

setMu(double, int) - Method in class yawn.nn.gasart.GasRecognitionNode

setNetworkConfig(NeuralNetworkConfig) - Method in class yawn.nn.committee.CommitteeElement

setNeuralNetwork(NeuralNetworkConfig) - Method in class yawn.io.Experiment

setNodesClassFullName(String) - Method in class yawn.nn.mlp.LayerConfig

setNodesClassName(String) - Method in class yawn.nn.mlp.LayerElement

setNumberOfInputs(int) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

setNumberOfMismatches(int) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setNumberOfSystemRuns(int) - Method in class yawn.envs.delve.DelveEnvironment

setNumberOfSystemRuns(int) - Method in class yawn.envs.Environment

setNumberOfSystemRuns(int) - Method in class yawn.envs.plaintext.PlainTextEnvironment

setNumberOfSystemRuns(int) - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

setOutputSize(int) - Method in class yawn.envs.plaintext.PlainTextEnvironment

setOverwriteExisting(boolean) - Method in class yawn.io.xml.XmlContext

setOverwriteResults(boolean) - Method in class yawn.envs.plaintext.PlainTextEnvironment

setPenality(double) - Method in class yawn.nn.gasart.GasRecognitionNode

setPopulationSize(int) - Method in class yawn.optim.genetic.GeneticParameterFitter

setPopulationSize(int) - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

setPredictionError(double) - Method in class yawn.nn.appart.AppArt

setPredictionError(double) - Method in class yawn.nn.appart.AppArtConfig

setPredictionError(double) - Method in class yawn.nn.mlp.MultiLayerPerceptron

setPredictionError(double) - Method in class yawn.nn.mlp.MultiLayerPerceptronConfig

setPredictionError(double) - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

setPredictionLayer(PredictionLayer) - Method in class yawn.nn.appart.AppArt

setPredictionLayerLearningRate(double) - Method in class yawn.nn.appart.AppArt

setPredictionLayerLearningRate(double) - Method in class yawn.nn.appart.AppArtConfig

setPreserveFittestIndividual(boolean) - Method in class yawn.optim.genetic.GeneticParameterFitter

setPreserveFittestIndividual(boolean) - Method in class yawn.optim.genetic.GeneticParameterFitterConfig

setProblemDirectory(String) - Method in class yawn.envs.delve.DelveEnvironment

setRepositoryDir(File) - Method in class yawn.io.xml.XmlContext

setResetActivation(double) - Method in class yawn.nn.gasart.GasRecognitionNode

setResultsDirectory(String) - Method in class yawn.envs.delve.DelveEnvironment

setResultsFileName(String) - Method in class yawn.envs.plaintext.PlainTextEnvironment

setRootSerializationClass(Class) - Method in class yawn.io.xml.XmlContext

setSerializer(ISerializer) - Method in class yawn.io.xml.XmlContext

setSerialProcessing(boolean) - Method in class yawn.nn.committee.NetworkCommittee

setSerialProcessing(boolean) - Method in class yawn.nn.committee.NetworkCommitteeConfig

setSigma(Pattern) - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

setSigma(double) - Method in class yawn.nn.gasart.GasRecognitionNode

setSize(int) - Method in class yawn.nn.mlp.LayerConfig

setSize(int) - Method in class yawn.nn.mlp.LayerElement

setSquareDimension(double) - Method in class yawn.envs.synthetic.CircleInTheSquareEnvironment

setStatisticsFacility(StatisticsFacility) - Method in class yawn.nn.NeuralNetwork

setTemplateConfig(NeuralNetworkConfig) - Method in class yawn.optim.genetic.JGapAdapter

setTestMatchVigilance(double) - Method in class yawn.nn.appart.AppArt

setTestMatchVigilance(double) - Method in class yawn.nn.appart.AppArtConfig

setTestSetSize(int) - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

setThreshold(double) - Method in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

setTrainingSet(InputOutputPattern[]) - Method in class yawn.optim.genetic.JGapAdapter

setTrainMatchVigilance(double) - Method in class yawn.nn.appart.AppArt

setTrainMatchVigilance(double) - Method in class yawn.nn.appart.AppArtConfig

setTrainSetSize(int) - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

setTrainToTestRatio(double) - Method in class yawn.envs.plaintext.PlainTextEnvironment

setup(NeuralNetworkConfig) - Method in class yawn.nn.appart.AppArt

setup(NeuralNetworkConfig) - Method in class yawn.nn.committee.NetworkCommittee

setup(NeuralNetworkConfig) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setup(NeuralNetworkConfig) - Method in class yawn.nn.mlp.MultiLayerPerceptron

setup(NeuralNetworkConfig) - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

setup(NeuralNetworkConfig) - Method in class yawn.nn.NeuralNetwork

setup(NeuralNetworkConfig) - Method in class yawn.optim.genetic.GeneticParameterFitter

setUseAbsoluteError(boolean) - Method in class yawn.nn.appart.AppArt

setUseAbsoluteError(boolean) - Method in class yawn.nn.appart.AppArtConfig

setUseComplementCoding(boolean) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setUseComplementCoding(boolean) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

setUseRelativeError(boolean) - Method in class yawn.nn.appart.AppArt

setVerbose(boolean) - Method in class yawn.ui.cli.RunExperiment

setVigilanceArtA(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setVigilanceArtA(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

setVigilanceArtB(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setVigilanceArtB(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

setVigilanceB(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

setVigilanceB(double) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMapConfig

setVigilanceParameter(double) - Method in class yawn.nn.appart.GainControlUnit

setVigilanceParameter(double) - Method in class yawn.nn.appart.GainControlUnitOnMatching

setVigilanceParameter(double) - Method in class yawn.nn.appart.GainControlUnitOnOutput

setWeights(Pattern) - Method in class yawn.nn.appart.PredictionNeuralNode

setWeights(Pattern) - Method in class yawn.nn.mlp.PerceptronNode

setWelcomeMsgEnabled(boolean) - Method in class yawn.ui.cli.RunExperiment

sigma - Variable in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

SigmoidNode - Class in yawn.nn.mlp

$Id: SigmoidNode.java,v 1.7 2005/04/07 17:28:07 supermarti Exp $

SigmoidNode(int) - Constructor for class yawn.nn.mlp.SigmoidNode

SigmoidNode() - Constructor for class yawn.nn.mlp.SigmoidNode

size() - Method in class yawn.nn.appart.PredictionLayer

size() - Method in class yawn.nn.Layer

size - Variable in class yawn.nn.mlp.LayerConfig

size - Variable in class yawn.nn.mlp.LayerElement

size() - Method in class yawn.util.Pattern

SmartMultiLayerPerceptron - Class in yawn.nn.mlp.smart

This is yawn.nn.mlp.SmartMultiLayerPerceptron part of the yawn project.

SmartMultiLayerPerceptron() - Constructor for class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

SmartMultiLayerPerceptronConfig - Class in yawn.nn.mlp.smart

This is yawn.nn.mlp.smart.SmartiMultiLayerPerceptronConfig part of the yawn project.

SmartMultiLayerPerceptronConfig() - Constructor for class yawn.nn.mlp.smart.SmartMultiLayerPerceptronConfig

squareDimension - Variable in class yawn.envs.synthetic.CircleInTheSquareEnvironment

StatisticsFacility - Interface in yawn.util

This is yawn.util.StatisticsFacility, part of the yawn project.

StorageException - Exception in yawn.io

$Id: StorageException.java,v 1.3 2005/04/07 17:28:25 supermarti Exp $

StorageException() - Constructor for exception yawn.io.StorageException

StorageException(String) - Constructor for exception yawn.io.StorageException

StorageException(String, Throwable) - Constructor for exception yawn.io.StorageException

StorageException(Throwable) - Constructor for exception yawn.io.StorageException

substract(Pattern) - Method in class yawn.util.Pattern

sumInputs - Variable in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

sumIW - Variable in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

SyntheticDataEnvironment - Class in yawn.envs.synthetic

An abstract class that represents a Synthetic environment .

SyntheticDataEnvironment() - Constructor for class yawn.envs.synthetic.SyntheticDataEnvironment

synthetizeOutput(Pattern) - Method in class yawn.envs.synthetic.CircleInTheSquareEnvironment

synthetizeOutput(Pattern) - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

synthetizeOutput(Pattern) - Method in class yawn.envs.synthetic.XOrDataEnvironment

(non-Javadoc)

T

templateConfig - Variable in class yawn.optim.genetic.JGapAdapter

TEST_FILE_NAME - Static variable in class yawn.envs.delve.DelveEnvironment

testMatchVigilance - Variable in class yawn.nn.appart.AppArt

testMatchVigilance - Variable in class yawn.nn.appart.AppArtConfig

testPattern(double[]) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

testSet - Variable in class yawn.envs.plaintext.PlainTextEnvironment

testSetSize - Variable in class yawn.envs.synthetic.SyntheticDataEnvironment

testSetsList - Variable in class yawn.envs.synthetic.SyntheticDataEnvironment

threshold - Variable in class yawn.nn.appart.RadialBasisFunctionsNeuralNode

holds the vigilance parameter specified in GF2

toString() - Method in class yawn.envs.Environment

toString() - Method in class yawn.nn.committee.CommitteeElement

toString() - Method in class yawn.nn.mlp.LayerElement

toString() - Method in class yawn.util.Pattern

train(InputOutputPattern[]) - Method in class yawn.nn.appart.AppArt

train(InputOutputPattern[]) - Method in class yawn.nn.committee.NetworkCommittee

train(double[][]) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

train(InputOutputPattern[]) - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

train(InputOutputPattern[]) - Method in class yawn.nn.mlp.MultiLayerPerceptron

train(InputOutputPattern[]) - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

train(InputOutputPattern[]) - Method in class yawn.nn.NeuralNetwork

Trains the network until the stop criteria is met.

train(InputOutputPattern[]) - Method in class yawn.optim.genetic.GeneticParameterFitter

TRAIN_FILE_NAME - Static variable in class yawn.envs.delve.DelveEnvironment

trainCurrentPattern() - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

trainingSet - Variable in class yawn.optim.genetic.JGapAdapter

trainMatchVigilance - Variable in class yawn.nn.appart.AppArt

trainMatchVigilance - Variable in class yawn.nn.appart.AppArtConfig

trainRandom(double[][]) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

trainSet - Variable in class yawn.envs.plaintext.PlainTextEnvironment

trainSetSize - Variable in class yawn.envs.synthetic.SyntheticDataEnvironment

trainSetsList - Variable in class yawn.envs.synthetic.SyntheticDataEnvironment

trainToTestRatio - Variable in class yawn.envs.plaintext.PlainTextEnvironment

U

unComplementCode(double[]) - Method in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

units - Variable in class yawn.nn.Layer

update(Object, String) - Method in interface yawn.io.IStorage

update(Object, String) - Method in class yawn.io.xml.XmlStorage

updateStructure(double, double) - Method in class yawn.nn.appart.PredictionNeuralNode

updateWeightsStructure(Pattern) - Method in class yawn.nn.appart.PredictionLayer

useAbsoluteError - Variable in class yawn.nn.appart.AppArt

useAbsoluteError - Variable in class yawn.nn.appart.AppArtConfig

useComplementCoding - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

useMinimumActivationMatchTracking(boolean) - Method in class yawn.nn.appart.AppArt

useOneShotMatchTracking(boolean) - Method in class yawn.nn.appart.AppArt

V

validate() - Method in class yawn.config.NeuralNetworkConfig

Validates the a NeuralNetworkConfig instance.

validate() - Method in class yawn.envs.delve.DelveEnvironment

validate() - Method in class yawn.envs.Environment

validate() - Method in class yawn.envs.plaintext.PlainTextEnvironment

validate() - Method in class yawn.envs.synthetic.CircleInTheSquareEnvironment

validate() - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

ValidationException - Exception in yawn.config

This is yawn.config.ValidationException, part of the yawn project.

ValidationException() - Constructor for exception yawn.config.ValidationException

ValidationException(String) - Constructor for exception yawn.config.ValidationException

ValidationException(String, Throwable) - Constructor for exception yawn.config.ValidationException

ValidationException(Throwable) - Constructor for exception yawn.config.ValidationException

verbose - Variable in class yawn.ui.cli.RunExperiment

vigilance - Variable in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

vigilanceArtA - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

vigilanceArtB - Variable in class yawn.nn.fuzzyartmap.FuzzyArtMap

W

weights - Variable in class yawn.nn.appart.PredictionNeuralNode

weights - Variable in class yawn.nn.mlp.PerceptronNode

welcomeMsgEnabled - Variable in class yawn.ui.cli.RunExperiment

winner - Variable in class yawn.nn.fuzzyartmap.fuzzyart.FuzzyArt

winner - Variable in class yawn.nn.gasart.GasRecognitionNode

writeResults(Pattern[], int) - Method in class yawn.envs.delve.DelveEnvironment

Writes a DELVE cguess file representing the predictions of a neural network.

writeResults(Pattern[], int) - Method in class yawn.envs.Environment

writeResults(Pattern[], int) - Method in class yawn.envs.plaintext.PlainTextEnvironment

Writes the results to a an ascii file.

writeResults(Pattern[], int) - Method in class yawn.envs.synthetic.SyntheticDataEnvironment

X

XmlContext - Class in yawn.io.xml

$Id: XmlContext.java,v 1.4 2005/04/07 17:28:28 supermarti Exp $

XmlContext() - Constructor for class yawn.io.xml.XmlContext

XmlStorage - Class in yawn.io.xml

Implementation of INeuralNetworkConfigStorage backed by xml files, one per neural network configuration.

XmlStorage(XmlContext) - Constructor for class yawn.io.xml.XmlStorage

XmlStorage() - Constructor for class yawn.io.xml.XmlStorage

XOrDataEnvironment - Class in yawn.envs.synthetic

This is yawn.envs.synthetic.XOrDataEnvironment part of the yawn project.

XOrDataEnvironment() - Constructor for class yawn.envs.synthetic.XOrDataEnvironment

Y

yawn - package yawn

yawn.config - package yawn.config

yawn.envs - package yawn.envs

yawn.envs.delve - package yawn.envs.delve

yawn.envs.plaintext - package yawn.envs.plaintext

yawn.envs.synthetic - package yawn.envs.synthetic

yawn.io - package yawn.io

yawn.io.serialization - package yawn.io.serialization

yawn.io.serialization.xml - package yawn.io.serialization.xml

yawn.io.xml - package yawn.io.xml

yawn.nn - package yawn.nn

yawn.nn.appart - package yawn.nn.appart

yawn.nn.committee - package yawn.nn.committee

yawn.nn.committee.functions - package yawn.nn.committee.functions

yawn.nn.fuzzyartmap - package yawn.nn.fuzzyartmap

yawn.nn.fuzzyartmap.fuzzyart - package yawn.nn.fuzzyartmap.fuzzyart

yawn.nn.gasart - package yawn.nn.gasart

yawn.nn.mlp - package yawn.nn.mlp

yawn.nn.mlp.smart - package yawn.nn.mlp.smart

yawn.optim - package yawn.optim

yawn.optim.genetic - package yawn.optim.genetic

yawn.ui.cli - package yawn.ui.cli

yawn.util - package yawn.util

YawnException - Exception in yawn

A base exception for Yawn.

YawnException() - Constructor for exception yawn.YawnException

YawnException(String) - Constructor for exception yawn.YawnException

YawnException(String, Throwable) - Constructor for exception yawn.YawnException

YawnException(Throwable) - Constructor for exception yawn.YawnException

YawnRuntimeException - Exception in yawn

A runtime exception for controling response to the unexpected errors.

YawnRuntimeException() - Constructor for exception yawn.YawnRuntimeException

YawnRuntimeException(String) - Constructor for exception yawn.YawnRuntimeException

YawnRuntimeException(Throwable) - Constructor for exception yawn.YawnRuntimeException

YawnRuntimeException(String, Throwable) - Constructor for exception yawn.YawnRuntimeException

yieldConfiguration() - Method in class yawn.nn.appart.AppArt

(non-Javadoc)

yieldConfiguration() - Method in class yawn.nn.committee.NetworkCommittee

yieldConfiguration() - Method in class yawn.nn.fuzzyartmap.FuzzyArtMap

yieldConfiguration() - Method in class yawn.nn.mlp.MultiLayerPerceptron

yieldConfiguration() - Method in class yawn.nn.mlp.smart.SmartMultiLayerPerceptron

yieldConfiguration() - Method in class yawn.nn.NeuralNetwork

yieldConfiguration() - Method in class yawn.optim.genetic.GeneticParameterFitter

Z

ZERO_PAT - Static variable in class yawn.envs.synthetic.CircleInTheSquareEnvironment

ZERO_PAT - Static variable in class yawn.envs.synthetic.XOrDataEnvironment

A B C D E F G H I J K L M N O P R S T U V W X Y Z