Yawn Java Framework - Checkstyle Results

Files	Infos	Warnings	Errors
182	0	0	7110

Files	I	W	E
yawn/YawnException.java	0	0	14
yawn/YawnRuntimeException.java	0	0	15
yawn/config/ConfigElement.java	0	0	6
yawn/config/ConfigurationException.java	0	0	14
yawn/config/NeuralNetworkConfig.java	0	0	1
yawn/config/NeuralNetworkConfig.java	0	0	53
yawn/config/ValidationException.java	0	0	14
yawn/config/package.html	0	0	1
yawn/envs/Environment.java	0	0	1
yawn/envs/Environment.java	0	0	22
yawn/envs/EnvironmentException.java	0	0	1
yawn/envs/EnvironmentException.java	0	0	14
yawn/envs/delve/DelveEnvironment.java	0	0	1
yawn/envs/delve/DelveEnvironment.java	0	0	130
yawn/envs/delve/DelveNotInitializedException.java	0	0	14
yawn/envs/delve/package.html	0	0	1
yawn/envs/package.html	0	0	1
yawn/envs/plaintext/PlainTextEnvironment.java	0	0	1
yawn/envs/plaintext/PlainTextEnvironment.java	0	0	297
yawn/envs/plaintext/package.html	0	0	1
yawn/envs/synthetic/CircleInTheSquareEnvironment.java	0	0	1
yawn/envs/synthetic/CircleInTheSquareEnvironment.java	0	0	87
yawn/envs/synthetic/SyntheticDataEnvironment.java	0	0	1
yawn/envs/synthetic/SyntheticDataEnvironment.java	0	0	156
yawn/envs/synthetic/XOrDataEnvironment.java	0	0	32
yawn/envs/synthetic/package.html	0	0	1
yawn/io/DuplicateKeyException.java	0	0	15
yawn/io/Experiment.java	0	0	1
yawn/io/Experiment.java	0	0	91
yawn/io/IStorage.java	0	0	28
yawn/io/KeyNotPresentException.java	0	0	15
yawn/io/StorageException.java	0	0	14
yawn/io/package.html	0	0	1
yawn/io/serialization/ISerializer.java	0	0	1
yawn/io/serialization/ISerializer.java	0	0	13
yawn/io/serialization/SerializationException.java	0	0	1
yawn/io/serialization/SerializationException.java	0	0	15
yawn/io/serialization/package.html	0	0	1
yawn/io/serialization/xml/BetwixtXmlSerializer.java	0	0	1
yawn/io/serialization/xml/BetwixtXmlSerializer.java	0	0	20
yawn/io/serialization/xml/CastorXmlSerializer.java	0	0	1
yawn/io/serialization/xml/CastorXmlSerializer.java	0	0	17
yawn/io/serialization/xml/package.html	0	0	1
yawn/io/xml/XmlStorage.java	0	0	1
yawn/io/xml/XmlStorage.java	0	0	267
yawn/io/xml/package.html	0	0	1
yawn/nn/InputLayer.java	0	0	1
yawn/nn/InputLayer.java	0	0	31
yawn/nn/Layer.java	0	0	1
yawn/nn/Layer.java	0	0	107
yawn/nn/NeuralNetwork.java	0	0	1
yawn/nn/NeuralNetwork.java	0	0	123
yawn/nn/NeuralNode.java	0	0	1
yawn/nn/NeuralNode.java	0	0	72
yawn/nn/OutputLayer.java	0	0	1
yawn/nn/OutputLayer.java	0	0	7
yawn/nn/appart/AppArt.java	0	0	1
yawn/nn/appart/AppArt.java	0	0	500
yawn/nn/appart/AppArtConfig.java	0	0	1
yawn/nn/appart/AppArtConfig.java	0	0	373
yawn/nn/appart/GainControlUnit.java	0	0	1
yawn/nn/appart/GainControlUnit.java	0	0	34
yawn/nn/appart/GainControlUnitOnMatching.java	0	0	1
yawn/nn/appart/GainControlUnitOnMatching.java	0	0	98
yawn/nn/appart/GainControlUnitOnOutput.java	0	0	1
yawn/nn/appart/GainControlUnitOnOutput.java	0	0	65
yawn/nn/appart/PredictionLayer.java	0	0	1
yawn/nn/appart/PredictionLayer.java	0	0	67
yawn/nn/appart/PredictionNeuralNode.java	0	0	1
yawn/nn/appart/PredictionNeuralNode.java	0	0	85
yawn/nn/appart/RadialBasisFunctionsNeuralNode.java	0	0	1
yawn/nn/appart/RadialBasisFunctionsNeuralNode.java	0	0	228
yawn/nn/appart/RecognitionLayer.java	0	0	1
yawn/nn/appart/RecognitionLayer.java	0	0	68
yawn/nn/appart/package.html	0	0	1
yawn/nn/committee/CommitteeElement.java	0	0	68
yawn/nn/committee/NetworkCommittee.java	0	0	1
yawn/nn/committee/NetworkCommittee.java	0	0	157
yawn/nn/committee/NetworkCommitteeConfig.java	0	0	160
yawn/nn/committee/functions/Average.java	0	0	1
yawn/nn/committee/functions/Average.java	0	0	8
yawn/nn/committee/functions/CommitteeFunction.java	0	0	1
yawn/nn/committee/functions/CommitteeFunction.java	0	0	9
yawn/nn/committee/functions/Popularity.java	0	0	1
yawn/nn/committee/functions/Popularity.java	0	0	11
yawn/nn/committee/functions/package.html	0	0	1
yawn/nn/committee/package.html	0	0	1
yawn/nn/fuzzyartmap/FuzzyArtMap.java	0	0	1
yawn/nn/fuzzyartmap/FuzzyArtMap.java	0	0	546
yawn/nn/fuzzyartmap/FuzzyArtMapConfig.java	0	0	1
yawn/nn/fuzzyartmap/FuzzyArtMapConfig.java	0	0	71
yawn/nn/fuzzyartmap/FuzzyArtMapJGapAdapter.java	0	0	35
yawn/nn/fuzzyartmap/fuzzyart/FuzzyArt.java	0	0	1
yawn/nn/fuzzyartmap/fuzzyart/FuzzyArt.java	0	0	211
yawn/nn/fuzzyartmap/fuzzyart/package.html	0	0	1
yawn/nn/fuzzyartmap/package.html	0	0	1
yawn/nn/gasart/GasArt.java	0	0	1
yawn/nn/gasart/GasArt.java	0	0	95
yawn/nn/gasart/GasEdge.java	0	0	1
yawn/nn/gasart/GasEdge.java	0	0	42
yawn/nn/gasart/GasRecognitionLayer.java	0	0	1
yawn/nn/gasart/GasRecognitionLayer.java	0	0	32
yawn/nn/gasart/GasRecognitionNode.java	0	0	1
yawn/nn/gasart/GasRecognitionNode.java	0	0	157
yawn/nn/gasart/package.html	0	0	1
yawn/nn/mlp/LayerConfig.java	0	0	1
yawn/nn/mlp/LayerConfig.java	0	0	70
yawn/nn/mlp/LayerElement.java	0	0	1
yawn/nn/mlp/LayerElement.java	0	0	73
yawn/nn/mlp/LinearNode.java	0	0	1
yawn/nn/mlp/LinearNode.java	0	0	12
yawn/nn/mlp/MLPLayer.java	0	0	1
yawn/nn/mlp/MLPLayer.java	0	0	31
yawn/nn/mlp/MultiLayerPerceptron.java	0	0	1
yawn/nn/mlp/MultiLayerPerceptron.java	0	0	222
yawn/nn/mlp/MultiLayerPerceptronConfig.java	0	0	1
yawn/nn/mlp/MultiLayerPerceptronConfig.java	0	0	166
yawn/nn/mlp/PerceptronNode.java	0	0	1
yawn/nn/mlp/PerceptronNode.java	0	0	139
yawn/nn/mlp/SigmoidNode.java	0	0	1
yawn/nn/mlp/SigmoidNode.java	0	0	13
yawn/nn/mlp/package.html	0	0	1
yawn/nn/mlp/smart/SmartMultiLayerPerceptron.java	0	0	49
yawn/nn/mlp/smart/SmartMultiLayerPerceptronConfig.java	0	0	174
yawn/nn/mlp/smart/package.html	0	0	1
yawn/nn/package.html	0	0	1
yawn/optim/OptimizableModel.java	0	0	13
yawn/optim/OptimizationAdapter.java	0	0	5
yawn/optim/ParamerFitter.java	0	0	5
yawn/optim/genetic/GeneticParameterFitter.java	0	0	404
yawn/optim/genetic/GeneticParameterFitterConfig.java	0	0	156
yawn/optim/genetic/JGapAdapter.java	0	0	125
yawn/optim/genetic/package.html	0	0	1
yawn/optim/package.html	0	0	1
yawn/package.html	0	0	1
yawn/ui/cli/CommandLineHaltRequestedException.java	0	0	1
yawn/ui/cli/CommandLineHaltRequestedException.java	0	0	5
yawn/ui/cli/CreateSampleExperiment.java	0	0	156
yawn/ui/cli/RunExperiment.java	0	0	1
yawn/ui/cli/RunExperiment.java	0	0	162
yawn/ui/cli/package.html	0	0	1
yawn/ui/gui/ExperimentCreator.java	0	0	44
yawn/ui/gui/SwingExperimentCreator.java	0	0	28
yawn/ui/gui/package.html	0	0	1
yawn/util/DefaultStatisticsFacility.java	0	0	27
yawn/util/ErrorUtils.java	0	0	1
yawn/util/ErrorUtils.java	0	0	16
yawn/util/InputOutputPattern.java	0	0	1
yawn/util/InputOutputPattern.java	0	0	27
yawn/util/MiscUtils.java	0	0	8
yawn/util/Pattern.java	0	0	1
yawn/util/Pattern.java	0	0	74
yawn/util/StatisticsFacility.java	0	0	8
yawn/util/package.html	0	0	1

yawn/YawnException.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	4
	Line has trailing spaces.	5
	Line has trailing spaces.	7
	Line has trailing spaces.	14
	Line has trailing spaces.	19
	Parameter arg0 should be final.	28
	Expected @param tag for 'arg0'.	28
	Parameter arg0 should be final.	36
	Expected @param tag for 'arg0'.	36
	Parameter arg1 should be final.	36
	Expected @param tag for 'arg1'.	36
	Parameter arg0 should be final.	43
	Expected @param tag for 'arg0'.	43

yawn/YawnRuntimeException.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	8
	Line has trailing spaces.	9
	Line is longer than 80 characters.	10
	Line has trailing spaces.	11
	Line has trailing spaces.	18
	Line has trailing spaces.	23
	Parameter message should be final.	32
	Expected @param tag for 'message'.	32
	Parameter cause should be final.	39
	Expected @param tag for 'cause'.	39
	Parameter message should be final.	47
	Expected @param tag for 'message'.	47
	Parameter cause should be final.	47
	Expected @param tag for 'cause'.	47

yawn/config/ConfigElement.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	13
	Line has trailing spaces.	15
	Definition of 'equals()' without corresponding definition of 'hashCode()'.	24
	Method 'equals' is not designed for extension - needs to be abstract, final or empty.	24
	Parameter op should be final.	24

yawn/config/ConfigurationException.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	13
	Line is longer than 80 characters.	14
	Line has trailing spaces.	15
	Line has trailing spaces.	21
	Line has trailing spaces.	26
	Parameter arg0 should be final.	35
	Expected @param tag for 'arg0'.	35
	Parameter arg0 should be final.	43
	Expected @param tag for 'arg0'.	43
	Parameter arg1 should be final.	43
	Expected @param tag for 'arg1'.	43
	Parameter arg0 should be final.	50
	Expected @param tag for 'arg0'.	50

yawn/config/NeuralNetworkConfig.java

Error		Line
	File does not end with a newline.	0

yawn/config/NeuralNetworkConfig.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	15
	Line is longer than 80 characters.	16
	Line has trailing spaces.	17
	Missing a Javadoc comment.	24
	First sentence should end with a period.	27
	Line has trailing spaces.	29
	Method 'configuredNetworkFactory' is not designed for extension - needs to be abstract, final or empty.	32
	Line is longer than 80 characters.	34
	Line contains a tab character.	46
	Line has trailing spaces.	47
	Line contains a tab character.	47
	Line contains a tab character.	48
	Expected an @return tag.	49
	Line contains a tab character.	49
	Line has trailing spaces.	54
	Line is longer than 80 characters.	55
	Parameter clazz should be final.	57
	Line has trailing spaces.	63
	Method 'validate' is not designed for extension - needs to be abstract, final or empty.	67
	Missing a Javadoc comment.	72
	Method 'environmentValidate' is not designed for extension - needs to be abstract, final or empty.	74
	Missing a Javadoc comment.	74
	Line contains a tab character.	78
	Line contains a tab character.	79
	Line contains a tab character.	80
	Line contains a tab character.	81
	Variable 'environment' must be private and have accessor methods.	81
	Line contains a tab character.	83
	Line has trailing spaces.	84
	Line contains a tab character.	84
	Line contains a tab character.	85
	Expected an @return tag.	86
	Line contains a tab character.	86
	Method 'getEnvironment' is not designed for extension - needs to be abstract, final or empty.	86
	Line contains a tab character.	87
	Line contains a tab character.	88
	Line contains a tab character.	90
	Line has trailing spaces.	91
	Line contains a tab character.	91
	Line contains a tab character.	92
	Line contains a tab character.	93
	Method 'setEnvironment' is not designed for extension - needs to be abstract, final or empty.	93
	Parameter environment should be final.	93
	'environment' hides a field.	93
	Expected @param tag for 'environment'.	93
	Line contains a tab character.	94
	Line contains a tab character.	95
	Line has trailing spaces.	96
	Line contains a tab character.	96
	Line has trailing spaces.	97
	Line contains a tab character.	97
	Missing a Javadoc comment.	97

yawn/config/ValidationException.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	13
	Line is longer than 80 characters.	14
	Line has trailing spaces.	15
	Line has trailing spaces.	22
	Line has trailing spaces.	27
	Parameter arg0 should be final.	37
	Expected @param tag for 'arg0'.	37
	Parameter arg0 should be final.	46
	Expected @param tag for 'arg0'.	46
	Parameter arg1 should be final.	46
	Expected @param tag for 'arg1'.	46
	Parameter arg0 should be final.	54
	Expected @param tag for 'arg0'.	54

yawn/config/package.html

Error		Line
	Missing package documentation file.	0

yawn/envs/Environment.java

Error		Line
	File does not end with a newline.	0

yawn/envs/Environment.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	13
	Line has trailing spaces.	15
	Line has trailing spaces.	24
	Missing a Javadoc comment.	29
	Parameter numberOfRuns should be final.	29
	Line has trailing spaces.	33
	Parameter runNumber should be final.	39
	Expected @throws tag for 'EnvironmentException'.	40
	Line has trailing spaces.	45
	Line is longer than 80 characters.	51
	Parameter runNumber should be final.	51
	Expected @throws tag for 'EnvironmentException'.	51
	Line is longer than 80 characters.	53
	Missing a Javadoc comment.	53
	Parameter results should be final.	53
	Parameter runNumber should be final.	53
	Missing a Javadoc comment.	55
	Method 'toString' is not designed for extension - needs to be abstract, final or empty.	57
	Missing a Javadoc comment.	57
	Missing a Javadoc comment.	61
	Missing a Javadoc comment.	63

yawn/envs/EnvironmentException.java

Error		Line
	File does not end with a newline.	0

yawn/envs/EnvironmentException.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	13
	Line is longer than 80 characters.	14
	Line has trailing spaces.	15
	Line has trailing spaces.	22
	Parameter arg0 should be final.	29
	Expected @param tag for 'arg0'.	29
	Parameter arg0 should be final.	37
	Expected @param tag for 'arg0'.	37
	Parameter arg1 should be final.	37
	Expected @param tag for 'arg1'.	37
	Parameter arg0 should be final.	44
	Expected @param tag for 'arg0'.	44
	Line has trailing spaces.	50

yawn/envs/delve/DelveEnvironment.java

Error		Line
	File does not end with a newline.	0

yawn/envs/delve/DelveEnvironment.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	5
	Missing a Javadoc comment.	24
	Missing a Javadoc comment.	26
	Missing a Javadoc comment.	28
	Parameter dir should be final.	28
	Parameter name should be final.	28
	Missing a Javadoc comment.	33
	Missing a Javadoc comment.	35
	Missing a Javadoc comment.	37
	Missing a Javadoc comment.	39
	Variable 'inputSize' must be private and have accessor methods.	39
	Missing a Javadoc comment.	41
	Variable 'outputSize' must be private and have accessor methods.	41
	Missing a Javadoc comment.	43
	Variable 'parsed' must be private and have accessor methods.	43
	Line contains a tab character.	45
	Line has trailing spaces.	46
	Line contains a tab character.	46
	Line has trailing spaces.	47
	Line contains a tab character.	47
	Line contains a tab character.	48
	Line contains a tab character.	49
	Variable 'problemDirectory' must be private and have accessor methods.	49
	Line contains a tab character.	51
	Line has trailing spaces.	52
	Line contains a tab character.	52
	Line has trailing spaces.	53
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line contains a tab character.	55
	Variable 'resultsDirectory' must be private and have accessor methods.	55
	Line has trailing spaces.	59
	Method 'getNumberOfSystemRuns' is not designed for extension - needs to be abstract, final or empty.	62
	Line is longer than 80 characters.	63
	Method 'outputSize' is not designed for extension - needs to be abstract, final or empty.	66
	Missing a Javadoc comment.	66
	Method 'inputSize' is not designed for extension - needs to be abstract, final or empty.	73
	Missing a Javadoc comment.	73
	Line contains a tab character.	80
	Line contains a tab character.	81
	Line has trailing spaces.	82
	Line contains a tab character.	82
	Line contains a tab character.	83
	Line contains a tab character.	84
	Line contains a tab character.	85
	Method 'getProblemDirectory' is not designed for extension - needs to be abstract, final or empty.	85
	Line contains a tab character.	86
	Line contains a tab character.	87
	Line contains a tab character.	89
	Line contains a tab character.	90
	Line has trailing spaces.	91
	Line contains a tab character.	91
	Line contains a tab character.	92
	Line contains a tab character.	93
	Line contains a tab character.	94
	Method 'getResultsDirectory' is not designed for extension - needs to be abstract, final or empty.	94
	Line contains a tab character.	95
	Line contains a tab character.	96
	Line has trailing spaces.	102
	Line is longer than 80 characters.	109
	Method 'getTestDatasetInputs' is not designed for extension - needs to be abstract, final or empty.	109
	Parameter runNumber should be final.	109
	Expected @throws tag for 'EnvironmentException'.	109
	Line is longer than 80 characters.	112
	Line has trailing spaces.	125
	Line is longer than 80 characters.	132
	Method 'getTrainingDataset' is not designed for extension - needs to be abstract, final or empty.	132
	Parameter runNumber should be final.	132
	Expected @throws tag for 'EnvironmentException'.	132
	Line is longer than 80 characters.	135
	Method 'init' is not designed for extension - needs to be abstract, final or empty.	139
	Missing a Javadoc comment.	139
	Line has trailing spaces.	150
	Line is longer than 80 characters.	155
	Method 'loadInputOutputFile' is not designed for extension - needs to be abstract, final or empty.	155
	Parameter fileName should be final.	155
	Expected @param tag for 'fileName'.	155
	Parameter numberOfOutputs should be final.	155
	Expected @param tag for 'numberOfOutputs'.	155
	Expected @throws tag for 'EnvironmentException'.	156
	'if' construct must use '{}'s.	162
	Line is longer than 80 characters.	166
	Line is longer than 80 characters.	169
	Line is longer than 80 characters.	173
	Line is longer than 80 characters.	179
	Method 'setNumberOfSystemRuns' is not designed for extension - needs to be abstract, final or empty.	185
	Missing a Javadoc comment.	185
	Parameter numberOfRuns should be final.	185
	Line contains a tab character.	189
	Line contains a tab character.	190
	Line contains a tab character.	191
	Line has trailing spaces.	192
	Line contains a tab character.	192
	Line contains a tab character.	193
	Line contains a tab character.	194
	Line contains a tab character.	195
	Method 'setProblemDirectory' is not designed for extension - needs to be abstract, final or empty.	195
	Parameter problemDirectory should be final.	195
	'problemDirectory' hides a field.	195
	Line contains a tab character.	196
	Line contains a tab character.	197
	Line contains a tab character.	199
	Line contains a tab character.	200
	Line contains a tab character.	201
	Line has trailing spaces.	202
	Line contains a tab character.	202
	Line contains a tab character.	203
	Line contains a tab character.	204
	Line contains a tab character.	205
	Method 'setResultsDirectory' is not designed for extension - needs to be abstract, final or empty.	205
	Parameter resultsDirectory should be final.	205
	'resultsDirectory' hides a field.	205
	Line contains a tab character.	206
	Line contains a tab character.	207
	Line has trailing spaces.	210
	Method 'validate' is not designed for extension - needs to be abstract, final or empty.	213
	Line has trailing spaces.	227
	Line is longer than 80 characters.	234
	Method 'writeResults' is not designed for extension - needs to be abstract, final or empty.	234
	Parameter results should be final.	234
	Parameter runNumber should be final.	234
	Expected @throws tag for 'EnvironmentException'.	234
	Line is longer than 80 characters.	237
	Line is longer than 80 characters.	238
	Line is longer than 80 characters.	241
	Line is longer than 80 characters.	245
	Must have at least one statement.	246
	Line is longer than 80 characters.	250
	Line is longer than 80 characters.	255

yawn/envs/delve/DelveNotInitializedException.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	13
	Line is longer than 80 characters.	14
	Line has trailing spaces.	15
	Line has trailing spaces.	22
	Line has trailing spaces.	27
	Parameter message should be final.	36
	Expected @param tag for 'message'.	36
	Parameter cause should be final.	43
	Expected @param tag for 'cause'.	43
	Parameter message should be final.	51
	Expected @param tag for 'message'.	51
	Parameter cause should be final.	51
	Expected @param tag for 'cause'.	51

yawn/envs/delve/package.html

Error		Line
	Missing package documentation file.	0

yawn/envs/package.html

Error		Line
	Missing package documentation file.	0

yawn/envs/plaintext/PlainTextEnvironment.java

Error		Line
	File does not end with a newline.	0

yawn/envs/plaintext/PlainTextEnvironment.java

Error		Line
	Line does not match expected header line of ' GNU GENERAL PUBLIC LICENSE'.	1
	Line has trailing spaces.	1
	Line has trailing spaces.	25
	Line is longer than 80 characters.	26
	Line has trailing spaces.	27
	Missing a Javadoc comment.	33
	Line contains a tab character.	35
	Line contains a tab character.	36
	Line has trailing spaces.	37
	Line contains a tab character.	37
	Line contains a tab character.	38
	Line contains a tab character.	39
	Line contains a tab character.	40
	Method 'isOverwriteResults' is not designed for extension - needs to be abstract, final or empty.	40
	Line contains a tab character.	41
	Line contains a tab character.	42
	Line contains a tab character.	44
	Line contains a tab character.	45
	Line contains a tab character.	46
	Line has trailing spaces.	47
	Line contains a tab character.	47
	Line contains a tab character.	48
	Line contains a tab character.	49
	Line contains a tab character.	50
	Method 'setOverwriteResults' is not designed for extension - needs to be abstract, final or empty.	50
	Parameter overwriteResults should be final.	50
	'overwriteResults' hides a field.	50
	Line contains a tab character.	51
	Line contains a tab character.	52
	Line contains a tab character.	54
	Line contains a tab character.	55
	Line has trailing spaces.	56
	Line contains a tab character.	56
	Line contains a tab character.	57
	Line contains a tab character.	58
	Line contains a tab character.	59
	Method 'getResultsFileName' is not designed for extension - needs to be abstract, final or empty.	59
	Line contains a tab character.	60
	Line contains a tab character.	61
	Line contains a tab character.	63
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line has trailing spaces.	66
	Line contains a tab character.	66
	Line contains a tab character.	67
	Line contains a tab character.	68
	Line contains a tab character.	69
	Method 'setResultsFileName' is not designed for extension - needs to be abstract, final or empty.	69
	Parameter resultsFileName should be final.	69
	'resultsFileName' hides a field.	69
	Line contains a tab character.	70
	Line contains a tab character.	71
	Line contains a tab character.	73
	Line has trailing spaces.	74
	Line contains a tab character.	74
	Line has trailing spaces.	75
	Line contains a tab character.	75
	Line contains a tab character.	76
	Line contains a tab character.	77
	Variable 'dataFileName' must be private and have accessor methods.	77
	Line contains a tab character.	79
	Line has trailing spaces.	80
	Line contains a tab character.	80
	Line has trailing spaces.	81
	Line contains a tab character.	81
	Line contains a tab character.	82
	Line contains a tab character.	83
	Variable 'resultsFileName' must be private and have accessor methods.	83
	Line contains a tab character.	85
	Line has trailing spaces.	86
	Line contains a tab character.	86
	Line has trailing spaces.	87
	Line contains a tab character.	87
	Line contains a tab character.	88
	Line contains a tab character.	89
	Variable 'overwriteResults' must be private and have accessor methods.	89
	Line contains a tab character.	91
	Line has trailing spaces.	92
	Line contains a tab character.	92
	Line has trailing spaces.	93
	Line contains a tab character.	93
	Line contains a tab character.	94
	Line contains a tab character.	95
	Variable 'elementSeparator' must be private and have accessor methods.	95
	Line contains a tab character.	97
	Line has trailing spaces.	98
	Line contains a tab character.	98
	Line has trailing spaces.	99
	Line contains a tab character.	99
	Line contains a tab character.	100
	Line contains a tab character.	101
	Variable 'inputSize' must be private and have accessor methods.	101
	Line contains a tab character.	103
	Line has trailing spaces.	104
	Line contains a tab character.	104
	Line has trailing spaces.	105
	Line contains a tab character.	105
	Line contains a tab character.	106
	Line contains a tab character.	107
	Variable 'numberOfSystemRuns' must be private and have accessor methods.	107
	Line contains a tab character.	109
	Line has trailing spaces.	110
	Line contains a tab character.	110
	Line has trailing spaces.	111
	Line contains a tab character.	111
	Line contains a tab character.	112
	Line contains a tab character.	113
	Variable 'outputSize' must be private and have accessor methods.	113
	Missing a Javadoc comment.	116
	Variable 'testSet' must be private and have accessor methods.	116
	Missing a Javadoc comment.	118
	Variable 'trainSet' must be private and have accessor methods.	118
	Line contains a tab character.	120
	Line has trailing spaces.	121
	Line contains a tab character.	121
	Line has trailing spaces.	122
	Line contains a tab character.	122
	Line contains a tab character.	123
	Line contains a tab character.	124
	Variable 'trainToTestRatio' must be private and have accessor methods.	124
	Line contains a tab character.	126
	Line contains a tab character.	127
	Line has trailing spaces.	128
	Line contains a tab character.	128
	Line contains a tab character.	129
	Line contains a tab character.	130
	Line contains a tab character.	131
	Method 'getDataFileName' is not designed for extension - needs to be abstract, final or empty.	131
	Line contains a tab character.	132
	Line contains a tab character.	133
	Line contains a tab character.	135
	Line has trailing spaces.	136
	Line contains a tab character.	136
	Line contains a tab character.	137
	Line contains a tab character.	138
	Expected an @return tag.	139
	Line contains a tab character.	139
	Method 'getElementSeparator' is not designed for extension - needs to be abstract, final or empty.	139
	Line contains a tab character.	140
	Line contains a tab character.	141
	Line contains a tab character.	143
	Line has trailing spaces.	144
	Line contains a tab character.	144
	Line contains a tab character.	145
	Line contains a tab character.	146
	Expected an @return tag.	147
	Line contains a tab character.	147
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	147
	Line contains a tab character.	148
	Line contains a tab character.	149
	Line contains a tab character.	151
	Line contains a tab character.	152
	Line has trailing spaces.	153
	Line contains a tab character.	153
	Line contains a tab character.	154
	Line contains a tab character.	155
	Line contains a tab character.	156
	Method 'getNumberOfSystemRuns' is not designed for extension - needs to be abstract, final or empty.	156
	Line contains a tab character.	157
	Line contains a tab character.	158
	Line contains a tab character.	160
	Line has trailing spaces.	161
	Line contains a tab character.	161
	Line contains a tab character.	162
	Line contains a tab character.	163
	Expected an @return tag.	164
	Line contains a tab character.	164
	Method 'getOutputSize' is not designed for extension - needs to be abstract, final or empty.	164
	Line contains a tab character.	165
	Line contains a tab character.	166
	Line has trailing spaces.	170
	Line is longer than 80 characters.	173
	Method 'getTestDatasetInputs' is not designed for extension - needs to be abstract, final or empty.	173
	Parameter runNumber should be final.	173
	Line has trailing spaces.	187
	Line is longer than 80 characters.	190
	Method 'getTrainingDataset' is not designed for extension - needs to be abstract, final or empty.	190
	Parameter runNumber should be final.	190
	Line contains a tab character.	198
	Line contains a tab character.	199
	Line has trailing spaces.	200
	Line contains a tab character.	200
	Line contains a tab character.	201
	Line contains a tab character.	202
	Line contains a tab character.	203
	Method 'getTrainToTestRatio' is not designed for extension - needs to be abstract, final or empty.	203
	Line contains a tab character.	204
	Line contains a tab character.	205
	Line has trailing spaces.	210
	Method 'inputSize' is not designed for extension - needs to be abstract, final or empty.	213
	Missing a Javadoc comment.	213
	Line has trailing spaces.	219
	Method 'outputSize' is not designed for extension - needs to be abstract, final or empty.	222
	Missing a Javadoc comment.	222
	Line contains a tab character.	226
	Line contains a tab character.	227
	Line contains a tab character.	228
	Line has trailing spaces.	229
	Line contains a tab character.	229
	Line contains a tab character.	230
	Line contains a tab character.	231
	Line contains a tab character.	232
	Method 'setDataFileName' is not designed for extension - needs to be abstract, final or empty.	232
	Parameter dataFileName should be final.	232
	'dataFileName' hides a field.	232
	Line contains a tab character.	233
	Line contains a tab character.	234
	Line contains a tab character.	236
	Line has trailing spaces.	237
	Line contains a tab character.	237
	Line contains a tab character.	238
	Line contains a tab character.	239
	Line contains a tab character.	240
	Method 'setElementSeparator' is not designed for extension - needs to be abstract, final or empty.	240
	Parameter elementSeparator should be final.	240
	'elementSeparator' hides a field.	240
	Expected @param tag for 'elementSeparator'.	240
	Line contains a tab character.	241
	Line contains a tab character.	242
	Line contains a tab character.	244
	Line has trailing spaces.	245
	Line contains a tab character.	245
	Line contains a tab character.	246
	Line contains a tab character.	247
	Line contains a tab character.	248
	Method 'setInputSize' is not designed for extension - needs to be abstract, final or empty.	248
	Parameter inputSize should be final.	248
	'inputSize' hides a field.	248
	Expected @param tag for 'inputSize'.	248
	Line contains a tab character.	249
	Line contains a tab character.	250
	Line contains a tab character.	252
	Line contains a tab character.	253
	Line contains a tab character.	254
	Line has trailing spaces.	255
	Line contains a tab character.	255
	Line contains a tab character.	256
	Line contains a tab character.	257
	Line contains a tab character.	258
	Method 'setNumberOfSystemRuns' is not designed for extension - needs to be abstract, final or empty.	258
	Parameter numberOfSystemRuns should be final.	258
	'numberOfSystemRuns' hides a field.	258
	Line contains a tab character.	259
	Line contains a tab character.	260
	Line contains a tab character.	262
	Line has trailing spaces.	263
	Line contains a tab character.	263
	Line contains a tab character.	264
	Line contains a tab character.	265
	Line contains a tab character.	266
	Method 'setOutputSize' is not designed for extension - needs to be abstract, final or empty.	266
	Parameter outputSize should be final.	266
	'outputSize' hides a field.	266
	Expected @param tag for 'outputSize'.	266
	Line contains a tab character.	267
	Line contains a tab character.	268
	Line contains a tab character.	270
	Line contains a tab character.	271
	Line contains a tab character.	272
	Line has trailing spaces.	273
	Line contains a tab character.	273
	Line contains a tab character.	274
	Line contains a tab character.	275
	Line contains a tab character.	276
	Method 'setTrainToTestRatio' is not designed for extension - needs to be abstract, final or empty.	276
	Parameter trainToTestRatio should be final.	276
	'trainToTestRatio' hides a field.	276
	Line contains a tab character.	277
	Line contains a tab character.	278
	Line has trailing spaces.	282
	Method 'validate' is not designed for extension - needs to be abstract, final or empty.	285
	Missing a Javadoc comment.	285
	Line is longer than 80 characters.	287
	Line is longer than 80 characters.	290
	Line is longer than 80 characters.	296
	Line is longer than 80 characters.	300
	Line has trailing spaces.	315
	Line is longer than 80 characters.	318
	Method 'writeResults' is not designed for extension - needs to be abstract, final or empty.	318
	Parameter results should be final.	318
	Parameter runNumber should be final.	318
	Line is longer than 80 characters.	320
	Method 'init' is not designed for extension - needs to be abstract, final or empty.	344
	Missing a Javadoc comment.	344
	Line is longer than 80 characters.	349
	Line is longer than 80 characters.	350
	Line is longer than 80 characters.	355
	Line is longer than 80 characters.	359
	Method 'loadInputOutputFile' is not designed for extension - needs to be abstract, final or empty.	359
	Missing a Javadoc comment.	359
	Parameter fileName should be final.	359
	'if' construct must use '{}'s.	367
	Line is longer than 80 characters.	374
	Line is longer than 80 characters.	376
	Line is longer than 80 characters.	379
	Line is longer than 80 characters.	384
	Line is longer than 80 characters.	391

yawn/envs/plaintext/package.html

Error		Line
	Missing package documentation file.	0

yawn/envs/synthetic/CircleInTheSquareEnvironment.java

Error		Line
	File does not end with a newline.	0

yawn/envs/synthetic/CircleInTheSquareEnvironment.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	17
	Line has trailing spaces.	20
	Line is longer than 80 characters.	21
	Line has trailing spaces.	22
	Line contains a tab character.	28
	Line has trailing spaces.	29
	Line contains a tab character.	29
	Line has trailing spaces.	30
	Line contains a tab character.	30
	Line contains a tab character.	31
	Line contains a tab character.	32
	Variable 'innerCircleRadius' must be private and have accessor methods.	32
	'0.399' is a magic number.	32
	Line contains a tab character.	34
	Line has trailing spaces.	35
	Line contains a tab character.	35
	Line has trailing spaces.	36
	Line contains a tab character.	36
	Line contains a tab character.	37
	Line contains a tab character.	38
	Variable 'squareDimension' must be private and have accessor methods.	38
	Line contains a tab character.	40
	Line has trailing spaces.	41
	Line contains a tab character.	41
	Line contains a tab character.	42
	Line contains a tab character.	43
	Expected an @return tag.	44
	Line contains a tab character.	44
	Method 'getInnerCircleRadius' is not designed for extension - needs to be abstract, final or empty.	44
	Line contains a tab character.	45
	Line contains a tab character.	46
	Line contains a tab character.	48
	Line has trailing spaces.	49
	Line contains a tab character.	49
	Line contains a tab character.	50
	Line contains a tab character.	51
	Line contains a tab character.	52
	Method 'setInnerCircleRadius' is not designed for extension - needs to be abstract, final or empty.	52
	Parameter innerCircleRadius should be final.	52
	'innerCircleRadius' hides a field.	52
	Expected @param tag for 'innerCircleRadius'.	52
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line contains a tab character.	56
	Line has trailing spaces.	57
	Line contains a tab character.	57
	Line contains a tab character.	58
	Line contains a tab character.	59
	Expected an @return tag.	60
	Line contains a tab character.	60
	Method 'getSquareDimension' is not designed for extension - needs to be abstract, final or empty.	60
	Line contains a tab character.	61
	Line contains a tab character.	62
	Line contains a tab character.	64
	Line has trailing spaces.	65
	Line contains a tab character.	65
	Line contains a tab character.	66
	Line contains a tab character.	67
	Line contains a tab character.	68
	Method 'setSquareDimension' is not designed for extension - needs to be abstract, final or empty.	68
	Parameter squareDimension should be final.	68
	'squareDimension' hides a field.	68
	Expected @param tag for 'squareDimension'.	68
	Line contains a tab character.	69
	Line contains a tab character.	70
	Line contains a tab character.	72
	Line has trailing spaces.	73
	Line contains a tab character.	73
	Line contains a tab character.	74
	Line contains a tab character.	75
	Line contains a tab character.	76
	Line contains a tab character.	77
	Variable 'center' must be private and have accessor methods.	77
	Missing a Javadoc comment.	79
	'{' is followed by whitespace.	79
	Missing a Javadoc comment.	81
	'{' is followed by whitespace.	81
	Method 'synthetizeOutput' is not designed for extension - needs to be abstract, final or empty.	83
	Missing a Javadoc comment.	83
	Parameter input should be final.	83
	'{' is followed by whitespace.	85
	Method 'generateRandomInput' is not designed for extension - needs to be abstract, final or empty.	98
	Missing a Javadoc comment.	98
	Method 'validate' is not designed for extension - needs to be abstract, final or empty.	104
	Missing a Javadoc comment.	104
	Line is longer than 80 characters.	106

yawn/envs/synthetic/SyntheticDataEnvironment.java

Error		Line
	File does not end with a newline.	0

yawn/envs/synthetic/SyntheticDataEnvironment.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line is longer than 80 characters.	23
	Line has trailing spaces.	26
	Line is longer than 80 characters.	27
	Line has trailing spaces.	28
	Line is longer than 80 characters.	34
	Missing a Javadoc comment.	34
	Name 'log' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	34
	Line contains a tab character.	36
	Line has trailing spaces.	37
	Line contains a tab character.	37
	Line contains a tab character.	38
	Line contains a tab character.	39
	Expected an @return tag.	40
	Line contains a tab character.	40
	Method 'getTestSetSize' is not designed for extension - needs to be abstract, final or empty.	40
	Line contains a tab character.	41
	Line contains a tab character.	42
	Line contains a tab character.	44
	Line has trailing spaces.	45
	Line contains a tab character.	45
	Line contains a tab character.	46
	Line contains a tab character.	47
	Line contains a tab character.	48
	Method 'setTestSetSize' is not designed for extension - needs to be abstract, final or empty.	48
	Parameter testSetSize should be final.	48
	'testSetSize' hides a field.	48
	Expected @param tag for 'testSetSize'.	48
	Line contains a tab character.	49
	Line contains a tab character.	50
	Line contains a tab character.	52
	Line has trailing spaces.	53
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line contains a tab character.	55
	Expected an @return tag.	56
	Line contains a tab character.	56
	Method 'getTrainSetSize' is not designed for extension - needs to be abstract, final or empty.	56
	Line contains a tab character.	57
	Line contains a tab character.	58
	Line contains a tab character.	60
	Line has trailing spaces.	61
	Line contains a tab character.	61
	Line contains a tab character.	62
	Line contains a tab character.	63
	Line contains a tab character.	64
	Method 'setTrainSetSize' is not designed for extension - needs to be abstract, final or empty.	64
	Parameter trainSetSize should be final.	64
	'trainSetSize' hides a field.	64
	Expected @param tag for 'trainSetSize'.	64
	Line contains a tab character.	65
	Line contains a tab character.	66
	Line contains a tab character.	68
	Line has trailing spaces.	69
	Line contains a tab character.	69
	Line has trailing spaces.	70
	Line contains a tab character.	70
	Line contains a tab character.	71
	Line contains a tab character.	72
	Variable 'trainSetSize' must be private and have accessor methods.	72
	Line contains a tab character.	74
	Line has trailing spaces.	75
	Line contains a tab character.	75
	Line has trailing spaces.	76
	Line contains a tab character.	76
	Line contains a tab character.	77
	Line contains a tab character.	78
	Variable 'testSetSize' must be private and have accessor methods.	78
	Line contains a tab character.	80
	Line has trailing spaces.	81
	Line contains a tab character.	81
	Line has trailing spaces.	82
	Line contains a tab character.	82
	Line contains a tab character.	83
	Line contains a tab character.	84
	Variable 'numberOfSystemRuns' must be private and have accessor methods.	84
	Line contains a tab character.	86
	Line has trailing spaces.	87
	Line contains a tab character.	87
	Line contains a tab character.	88
	Line is longer than 80 characters.	89
	Line contains a tab character.	89
	Line contains a tab character.	90
	Line contains a tab character.	91
	Variable 'trainSetsList' must be private and have accessor methods.	91
	Line contains a tab character.	93
	Line has trailing spaces.	94
	Line contains a tab character.	94
	Line contains a tab character.	95
	Line is longer than 80 characters.	96
	Line contains a tab character.	96
	Line contains a tab character.	97
	Line contains a tab character.	98
	Variable 'testSetsList' must be private and have accessor methods.	98
	Line contains a tab character.	100
	Line has trailing spaces.	101
	Line contains a tab character.	101
	Line contains a tab character.	102
	Line contains a tab character.	103
	Expected an @return tag.	104
	Line contains a tab character.	104
	Method 'getNumberOfSystemRuns' is not designed for extension - needs to be abstract, final or empty.	104
	Line contains a tab character.	105
	Line contains a tab character.	106
	Line contains a tab character.	108
	Line has trailing spaces.	109
	Line contains a tab character.	109
	Line contains a tab character.	110
	Line contains a tab character.	111
	Line contains a tab character.	112
	Method 'setNumberOfSystemRuns' is not designed for extension - needs to be abstract, final or empty.	112
	Parameter numberOfRuns should be final.	112
	Expected @param tag for 'numberOfRuns'.	112
	Line contains a tab character.	113
	Line contains a tab character.	114
	Method 'init' is not designed for extension - needs to be abstract, final or empty.	116
	Missing a Javadoc comment.	116
	Line is longer than 80 characters.	125
	Method 'getTrainingDataset' is not designed for extension - needs to be abstract, final or empty.	125
	Missing a Javadoc comment.	125
	Parameter runNumber should be final.	125
	Method 'generateSet' is not designed for extension - needs to be abstract, final or empty.	136
	Missing a Javadoc comment.	136
	Parameter setSize should be final.	136
	Missing a Javadoc comment.	150
	Missing a Javadoc comment.	152
	Parameter input should be final.	152
	Line is longer than 80 characters.	154
	Method 'getTestDatasetInputs' is not designed for extension - needs to be abstract, final or empty.	154
	Missing a Javadoc comment.	154
	Parameter runNumber should be final.	154
	Line has trailing spaces.	171
	Line is longer than 80 characters.	172
	Method 'getTestDataset' is not designed for extension - needs to be abstract, final or empty.	172
	Missing a Javadoc comment.	172
	Parameter runNumber should be final.	172
	Line is longer than 80 characters.	184
	Method 'getTestExpectedOutputsSet' is not designed for extension - needs to be abstract, final or empty.	184
	Missing a Javadoc comment.	184
	Parameter runNumber should be final.	184
	Method 'getFullTestDataset' is not designed for extension - needs to be abstract, final or empty.	202
	Missing a Javadoc comment.	202
	Parameter runNumber should be final.	202
	Line is longer than 80 characters.	213
	Method 'writeResults' is not designed for extension - needs to be abstract, final or empty.	213
	Missing a Javadoc comment.	213
	Parameter results should be final.	213
	Parameter runNumber should be final.	213
	Method 'validate' is not designed for extension - needs to be abstract, final or empty.	219
	Missing a Javadoc comment.	219
	Line has trailing spaces.	227
	Method 'inputSize' is not designed for extension - needs to be abstract, final or empty.	230
	Missing a Javadoc comment.	230
	Line has trailing spaces.	239
	Method 'outputSize' is not designed for extension - needs to be abstract, final or empty.	242
	Missing a Javadoc comment.	242

yawn/envs/synthetic/XOrDataEnvironment.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	13
	Line is longer than 80 characters.	14
	Line has trailing spaces.	15
	Line is longer than 80 characters.	20
	Missing a Javadoc comment.	20
	Name 'inputSpace' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	20
	'{' is followed by whitespace.	20
	'{' is followed by whitespace.	20
	'{' is followed by whitespace.	20
	'{' is followed by whitespace.	20
	'{' is followed by whitespace.	20
	Line contains a tab character.	22
	Line has trailing spaces.	23
	Line contains a tab character.	23
	Line contains a tab character.	24
	Line contains a tab character.	25
	Line contains a tab character.	26
	Line contains a tab character.	27
	Missing a Javadoc comment.	29
	'{' is followed by whitespace.	29
	Missing a Javadoc comment.	31
	'{' is followed by whitespace.	31
	Line has trailing spaces.	35
	Method 'generateRandomInput' is not designed for extension - needs to be abstract, final or empty.	38
	Missing a Javadoc comment.	38
	Line is longer than 80 characters.	39
	First sentence should end with a period.	42
	Line has trailing spaces.	44
	Line is longer than 80 characters.	45
	Method 'synthetizeOutput' is not designed for extension - needs to be abstract, final or empty.	47
	Parameter input should be final.	47

yawn/envs/synthetic/package.html

Error		Line
	Missing package documentation file.	0

yawn/io/DuplicateKeyException.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	6
	Line has trailing spaces.	7
	Line is longer than 80 characters.	8
	Line has trailing spaces.	9
	Line has trailing spaces.	16
	Line has trailing spaces.	21
	Parameter arg0 should be final.	31
	Expected @param tag for 'arg0'.	31
	Parameter arg0 should be final.	40
	Expected @param tag for 'arg0'.	40
	Parameter arg1 should be final.	40
	Expected @param tag for 'arg1'.	40
	Parameter arg0 should be final.	48
	Expected @param tag for 'arg0'.	48

yawn/io/Experiment.java

Error		Line
	File does not end with a newline.	0

yawn/io/Experiment.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	9
	Line has trailing spaces.	11
	Line contains a tab character.	17
	Line has trailing spaces.	18
	Line contains a tab character.	18
	Line contains a tab character.	19
	Line contains a tab character.	20
	Line contains a tab character.	21
	Line contains a tab character.	22
	Variable 'neuralNetwork' must be private and have accessor methods.	22
	Line contains a tab character.	24
	Line has trailing spaces.	25
	Line contains a tab character.	25
	Line contains a tab character.	26
	Line contains a tab character.	27
	Line contains a tab character.	28
	Line contains a tab character.	29
	Variable 'environment' must be private and have accessor methods.	29
	Line contains a tab character.	31
	Line has trailing spaces.	32
	Line contains a tab character.	32
	Line contains a tab character.	33
	Line contains a tab character.	34
	Line contains a tab character.	35
	Line contains a tab character.	36
	Variable 'storage' must be private and have accessor methods.	36
	Missing a Javadoc comment.	39
	Line contains a tab character.	42
	Line contains a tab character.	43
	Line has trailing spaces.	44
	Line contains a tab character.	44
	Line contains a tab character.	45
	Line contains a tab character.	46
	Line contains a tab character.	47
	Method 'getEnvironment' is not designed for extension - needs to be abstract, final or empty.	47
	Line contains a tab character.	48
	Line contains a tab character.	49
	Line contains a tab character.	51
	Line contains a tab character.	52
	Line contains a tab character.	53
	Line has trailing spaces.	54
	Line contains a tab character.	54
	Line contains a tab character.	55
	Line contains a tab character.	56
	Line contains a tab character.	57
	Method 'setEnvironment' is not designed for extension - needs to be abstract, final or empty.	57
	Parameter environment should be final.	57
	'environment' hides a field.	57
	Line contains a tab character.	58
	Line contains a tab character.	59
	Line contains a tab character.	61
	Line contains a tab character.	62
	Line has trailing spaces.	63
	Line contains a tab character.	63
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line contains a tab character.	66
	Method 'getNeuralNetwork' is not designed for extension - needs to be abstract, final or empty.	66
	Line contains a tab character.	67
	Line contains a tab character.	68
	Line contains a tab character.	70
	Line contains a tab character.	71
	Line contains a tab character.	72
	Line has trailing spaces.	73
	Line contains a tab character.	73
	Line contains a tab character.	74
	Line contains a tab character.	75
	Line contains a tab character.	76
	Method 'setNeuralNetwork' is not designed for extension - needs to be abstract, final or empty.	76
	Parameter neuralNetwork should be final.	76
	'neuralNetwork' hides a field.	76
	Line contains a tab character.	77
	Line contains a tab character.	78
	Must have at least one statement.	85
	Line contains a tab character.	93
	Line contains a tab character.	94
	Line contains a tab character.	95
	Line contains a tab character.	96
	Method 'getStorage' is not designed for extension - needs to be abstract, final or empty.	96
	Line contains a tab character.	97
	Line contains a tab character.	98
	Line contains a tab character.	99
	Line contains a tab character.	100
	Line contains a tab character.	101
	Line contains a tab character.	102
	Method 'setStorage' is not designed for extension - needs to be abstract, final or empty.	102
	Parameter storage should be final.	102
	'storage' hides a field.	102
	Line contains a tab character.	103
	Line contains a tab character.	104

yawn/io/IStorage.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	3
	Line has trailing spaces.	10
	Line has trailing spaces.	12
	Line has trailing spaces.	22
	Line is longer than 80 characters.	26
	Redundant 'public' modifier.	26
	Expected @param tag for 'key'.	26
	Expected @throws tag for 'StorageException'.	26
	Expected @throws tag for 'DuplicateKeyException'.	26
	Redundant throws: 'DuplicateKeyException' is subclass of 'StorageException'.	26
	Missing a Javadoc comment.	28
	Redundant 'public' modifier.	28
	Line is longer than 80 characters.	30
	Missing a Javadoc comment.	30
	Redundant 'public' modifier.	30
	Redundant throws: 'KeyNotPresentException' is subclass of 'StorageException'.	30
	Line has trailing spaces.	35
	Line is longer than 80 characters.	42
	Redundant 'public' modifier.	42
	Expected @throws tag for 'StorageException'.	42
	Expected @throws tag for 'KeyNotPresentException'.	42
	Redundant throws: 'KeyNotPresentException' is subclass of 'StorageException'.	42
	Line has trailing spaces.	47
	Redundant 'public' modifier.	50
	Expected @throws tag for 'StorageException'.	50
	Missing a Javadoc comment.	52
	Redundant 'public' modifier.	52

yawn/io/KeyNotPresentException.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	6
	Line has trailing spaces.	7
	Line is longer than 80 characters.	8
	Line has trailing spaces.	9
	Line has trailing spaces.	16
	Line has trailing spaces.	21
	Parameter arg0 should be final.	31
	Expected @param tag for 'arg0'.	31
	Parameter arg0 should be final.	40
	Expected @param tag for 'arg0'.	40
	Parameter arg1 should be final.	40
	Expected @param tag for 'arg1'.	40
	Parameter arg0 should be final.	48
	Expected @param tag for 'arg0'.	48

yawn/io/StorageException.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	8
	Line has trailing spaces.	9
	Line has trailing spaces.	11
	Line has trailing spaces.	18
	Line has trailing spaces.	23
	Parameter arg0 should be final.	33
	Expected @param tag for 'arg0'.	33
	Parameter arg0 should be final.	42
	Expected @param tag for 'arg0'.	42
	Parameter arg1 should be final.	42
	Expected @param tag for 'arg1'.	42
	Parameter arg0 should be final.	50
	Expected @param tag for 'arg0'.	50

yawn/io/package.html

Error		Line
	Missing package documentation file.	0

yawn/io/serialization/ISerializer.java

Error		Line
	File does not end with a newline.	0

yawn/io/serialization/ISerializer.java

Error		Line
	Missing a header - not enough lines in file.	1
	Unused import - java.io.IOException.	3
	Line has trailing spaces.	9
	Line has trailing spaces.	11
	Line has trailing spaces.	19
	Line is longer than 80 characters.	27
	Redundant 'public' modifier.	27
	Expected @throws tag for 'SerializationException'.	27
	First sentence should end with a period.	29
	Line has trailing spaces.	31
	Line is longer than 80 characters.	40
	Redundant 'public' modifier.	40
	Expected @throws tag for 'SerializationException'.	40

yawn/io/serialization/SerializationException.java

Error		Line
	File does not end with a newline.	0

yawn/io/serialization/SerializationException.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	3
	Line has trailing spaces.	13
	Line is longer than 80 characters.	14
	Extra HTML tag found: </p>	14
	Line has trailing spaces.	15
	Line has trailing spaces.	22
	Missing a Javadoc comment.	26
	Missing a Javadoc comment.	30
	Parameter theMessage should be final.	30
	Missing a Javadoc comment.	34
	Parameter theCause should be final.	34
	Missing a Javadoc comment.	38
	Parameter theMessage should be final.	38
	Parameter theCause should be final.	38

yawn/io/serialization/package.html

Error		Line
	Missing package documentation file.	0

yawn/io/serialization/xml/BetwixtXmlSerializer.java

Error		Line
	File does not end with a newline.	0

yawn/io/serialization/xml/BetwixtXmlSerializer.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	3
	Line has trailing spaces.	24
	Line is longer than 80 characters.	25
	Line has trailing spaces.	26
	Line has trailing spaces.	33
	Method 'serialize' is not designed for extension - needs to be abstract, final or empty.	37
	Parameter network should be final.	37
	Parameter theDestination should be final.	37
	Line is longer than 80 characters.	42
	Line is longer than 80 characters.	44
	Line has trailing spaces.	68
	Line is longer than 80 characters.	69
	Line is longer than 80 characters.	71
	Method 'deSerialize' is not designed for extension - needs to be abstract, final or empty.	71
	Parameter root should be final.	71
	Parameter reader should be final.	71
	Line is longer than 80 characters.	79
	Line is longer than 80 characters.	81
	Line is longer than 80 characters.	83

yawn/io/serialization/xml/CastorXmlSerializer.java

Error		Line
	File does not end with a newline.	0

yawn/io/serialization/xml/CastorXmlSerializer.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	3
	First sentence should end with a period.	19
	Line has trailing spaces.	21
	Line is longer than 80 characters.	22
	Line has trailing spaces.	23
	Line has trailing spaces.	30
	Line is longer than 80 characters.	34
	Method 'serialize' is not designed for extension - needs to be abstract, final or empty.	34
	Parameter network should be final.	34
	Parameter writer should be final.	34
	Line has trailing spaces.	45
	Line is longer than 80 characters.	46
	Line is longer than 80 characters.	48
	Method 'deSerialize' is not designed for extension - needs to be abstract, final or empty.	48
	Parameter root should be final.	48
	Parameter reader should be final.	48

yawn/io/serialization/xml/package.html

Error		Line
	Missing package documentation file.	0

yawn/io/xml/XmlStorage.java

Error		Line
	File does not end with a newline.	0

yawn/io/xml/XmlStorage.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	3
	First sentence should end with a period.	25
	Line has trailing spaces.	26
	Line has trailing spaces.	28
	Line contains a tab character.	34
	Missing a Javadoc comment.	34
	'=' is not preceded with whitespace.	34
	'=' is not followed by whitespace.	34
	Line has trailing spaces.	35
	Line contains a tab character.	35
	Line is longer than 80 characters.	36
	Line contains a tab character.	36
	Missing a Javadoc comment.	36
	'=' is not followed by whitespace.	36
	Line has trailing spaces.	37
	Line contains a tab character.	37
	Line is longer than 80 characters.	38
	Line contains a tab character.	38
	Missing a Javadoc comment.	38
	First sentence should end with a period.	39
	Line contains a tab character.	39
	Line contains a tab character.	40
	Line has trailing spaces.	41
	Line contains a tab character.	41
	Line has trailing spaces.	42
	Line contains a tab character.	42
	Line contains a tab character.	43
	Line contains a tab character.	44
	Line contains a tab character.	46
	Line contains a tab character.	47
	Line has trailing spaces.	48
	Line contains a tab character.	48
	Line has trailing spaces.	49
	Line contains a tab character.	49
	Line contains a tab character.	50
	Line contains a tab character.	51
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line has trailing spaces.	55
	Line contains a tab character.	55
	Line has trailing spaces.	56
	Line contains a tab character.	56
	Line contains a tab character.	57
	Line contains a tab character.	58
	Line contains a tab character.	60
	Line contains a tab character.	61
	Line has trailing spaces.	62
	Line contains a tab character.	62
	Line has trailing spaces.	63
	Line contains a tab character.	63
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line contains a tab character.	67
	Line has trailing spaces.	68
	Line contains a tab character.	68
	Line has trailing spaces.	69
	Line contains a tab character.	69
	Line contains a tab character.	70
	Line contains a tab character.	71
	Line contains a tab character.	73
	Line contains a tab character.	74
	Line contains a tab character.	75
	Line has trailing spaces.	76
	Line contains a tab character.	76
	Line contains a tab character.	77
	Line contains a tab character.	78
	Line contains a tab character.	79
	Line contains a tab character.	80
	Line contains a tab character.	82
	Line contains a tab character.	83
	Line has trailing spaces.	84
	Line contains a tab character.	84
	Line contains a tab character.	85
	Line contains a tab character.	86
	Line contains a tab character.	87
	Method 'getFileNameSuffix' is not designed for extension - needs to be abstract, final or empty.	87
	Line contains a tab character.	88
	Line contains a tab character.	89
	Line contains a tab character.	91
	Line contains a tab character.	92
	Line has trailing spaces.	93
	Line contains a tab character.	93
	Line contains a tab character.	94
	Line contains a tab character.	95
	Line contains a tab character.	96
	Method 'getRepositoryDir' is not designed for extension - needs to be abstract, final or empty.	96
	Line contains a tab character.	97
	Line contains a tab character.	98
	Line contains a tab character.	100
	Line contains a tab character.	101
	Line has trailing spaces.	102
	Line contains a tab character.	102
	Line contains a tab character.	103
	Line contains a tab character.	104
	Line contains a tab character.	105
	Method 'getSerializer' is not designed for extension - needs to be abstract, final or empty.	105
	Line contains a tab character.	106
	Line contains a tab character.	107
	Line contains a tab character.	109
	Line contains a tab character.	110
	Line has trailing spaces.	111
	Line contains a tab character.	111
	Line contains a tab character.	112
	Line contains a tab character.	113
	Line contains a tab character.	114
	Method 'isAutoCreateReposotory' is not designed for extension - needs to be abstract, final or empty.	114
	Line contains a tab character.	115
	Line contains a tab character.	116
	Line contains a tab character.	118
	Line contains a tab character.	119
	Line has trailing spaces.	120
	Line contains a tab character.	120
	Line contains a tab character.	121
	Line contains a tab character.	122
	Line contains a tab character.	123
	Method 'isOverwriteExisting' is not designed for extension - needs to be abstract, final or empty.	123
	Line contains a tab character.	124
	Line contains a tab character.	125
	Line contains a tab character.	127
	Line contains a tab character.	128
	Line contains a tab character.	129
	Line has trailing spaces.	130
	Line contains a tab character.	130
	Line contains a tab character.	131
	Line contains a tab character.	132
	Line contains a tab character.	133
	Method 'setAutoCreateReposotory' is not designed for extension - needs to be abstract, final or empty.	133
	Parameter autoCreateReposotory should be final.	133
	'autoCreateReposotory' hides a field.	133
	Line contains a tab character.	134
	Line contains a tab character.	135
	Line contains a tab character.	137
	Line contains a tab character.	138
	Line contains a tab character.	139
	Line has trailing spaces.	140
	Line contains a tab character.	140
	Line contains a tab character.	141
	Line contains a tab character.	142
	Line contains a tab character.	143
	Method 'setFileNameSuffix' is not designed for extension - needs to be abstract, final or empty.	143
	Parameter fileNameSuffix should be final.	143
	'fileNameSuffix' hides a field.	143
	Line contains a tab character.	144
	Line contains a tab character.	145
	Line contains a tab character.	147
	Line contains a tab character.	148
	Line contains a tab character.	149
	Line has trailing spaces.	150
	Line contains a tab character.	150
	Line contains a tab character.	151
	Line contains a tab character.	152
	Line contains a tab character.	153
	Method 'setOverwriteExisting' is not designed for extension - needs to be abstract, final or empty.	153
	Parameter overwriteExisting should be final.	153
	'overwriteExisting' hides a field.	153
	Line contains a tab character.	154
	Line contains a tab character.	155
	Line contains a tab character.	157
	Line contains a tab character.	158
	Line contains a tab character.	159
	Line has trailing spaces.	160
	Line contains a tab character.	160
	Line contains a tab character.	161
	Line contains a tab character.	162
	Line contains a tab character.	163
	Method 'setRepositoryDir' is not designed for extension - needs to be abstract, final or empty.	163
	Parameter repositoryDir should be final.	163
	'repositoryDir' hides a field.	163
	Line contains a tab character.	164
	Line contains a tab character.	165
	Line contains a tab character.	167
	Line contains a tab character.	168
	Line contains a tab character.	169
	Line has trailing spaces.	170
	Line contains a tab character.	170
	Line contains a tab character.	171
	Line contains a tab character.	172
	Line contains a tab character.	173
	Method 'setSerializer' is not designed for extension - needs to be abstract, final or empty.	173
	Parameter serializer should be final.	173
	'serializer' hides a field.	173
	Line contains a tab character.	174
	Line contains a tab character.	175
	Line contains a tab character.	177
	Line contains a tab character.	178
	Line has trailing spaces.	179
	Line contains a tab character.	179
	Line contains a tab character.	180
	Line contains a tab character.	181
	Line contains a tab character.	182
	Method 'getRootSerializationClass' is not designed for extension - needs to be abstract, final or empty.	182
	Line contains a tab character.	183
	Line contains a tab character.	184
	Line contains a tab character.	186
	Line contains a tab character.	187
	Line contains a tab character.	188
	Line has trailing spaces.	189
	Line contains a tab character.	189
	Line contains a tab character.	190
	Line contains a tab character.	191
	Line contains a tab character.	192
	Method 'setRootSerializationClass' is not designed for extension - needs to be abstract, final or empty.	192
	Parameter rootSerializationClass should be final.	192
	'rootSerializationClass' hides a field.	192
	Line contains a tab character.	193
	Line contains a tab character.	194
	Missing a Javadoc comment.	197
	Line is longer than 80 characters.	200
	Line contains a tab character.	200
	Line contains a tab character.	201
	Line contains a tab character.	202
	Line contains a tab character.	203
	Line contains a tab character.	204
	Line contains a tab character.	205
	Line contains a tab character.	206
	Line contains a tab character.	207
	Line is longer than 80 characters.	213
	Method 'insert' is not designed for extension - needs to be abstract, final or empty.	213
	Parameter object should be final.	213
	Parameter key should be final.	213
	Redundant throws: 'DuplicateKeyException' is subclass of 'StorageException'.	213
	Line is longer than 80 characters.	217
	Line is longer than 80 characters.	223
	Method 'serializeObject' is not designed for extension - needs to be abstract, final or empty.	223
	Missing a Javadoc comment.	223
	Parameter object should be final.	223
	Parameter file should be final.	223
	Line is longer than 80 characters.	225
	Line has trailing spaces.	236
	Line has trailing spaces.	238
	Method 'generateKey' is not designed for extension - needs to be abstract, final or empty.	241
	Parameter object should be final.	241
	Line is longer than 80 characters.	245
	',' is not followed by whitespace.	245
	Method 'prepareFile' is not designed for extension - needs to be abstract, final or empty.	256
	Missing a Javadoc comment.	256
	Parameter key should be final.	256
	Line is longer than 80 characters.	263
	Method 'update' is not designed for extension - needs to be abstract, final or empty.	263
	Parameter object should be final.	263
	Parameter key should be final.	263
	Redundant throws: 'KeyNotPresentException' is subclass of 'StorageException'.	263
	Line has trailing spaces.	278
	Expected an @return tag.	282
	Line is longer than 80 characters.	282
	Method 'get' is not designed for extension - needs to be abstract, final or empty.	282
	Parameter key should be final.	282
	Expected @param tag for 'key'.	282
	Expected @throws tag for 'StorageException'.	282
	Expected @throws tag for 'KeyNotPresentException'.	282
	Redundant throws: 'KeyNotPresentException' is subclass of 'StorageException'.	282
	Method 'deSerializeObject' is not designed for extension - needs to be abstract, final or empty.	291
	Missing a Javadoc comment.	291
	Parameter file should be final.	291
	Line is longer than 80 characters.	293
	Line is longer than 80 characters.	294
	Line has trailing spaces.	304
	Method 'getAll' is not designed for extension - needs to be abstract, final or empty.	307
	Missing a Javadoc comment.	326
	Missing a Javadoc comment.	327
	Missing a Javadoc comment.	329
	Parameter extension should be final.	329
	'extension' hides a field.	329
	Missing a Javadoc comment.	333
	Parameter dir should be final.	333
	Parameter name should be final.	333

yawn/io/xml/package.html

Error		Line
	Missing package documentation file.	0

yawn/nn/InputLayer.java

Error		Line
	File does not end with a newline.	0

yawn/nn/InputLayer.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	7
	Line has trailing spaces.	9
	Line contains a tab character.	16
	Line has trailing spaces.	17
	Line contains a tab character.	17
	Line contains a tab character.	18
	Line contains a tab character.	19
	Line contains a tab character.	20
	Line contains a tab character.	21
	Variable 'input' must be private and have accessor methods.	21
	Missing a Javadoc comment.	24
	Missing a Javadoc comment.	29
	Parameter nextLayer should be final.	29
	Parameter inputSize should be final.	29
	Method 'setInput' is not designed for extension - needs to be abstract, final or empty.	34
	Missing a Javadoc comment.	34
	Parameter p should be final.	34
	Line contains a tab character.	38
	Line has trailing spaces.	39
	Line contains a tab character.	39
	Line contains a tab character.	40
	Line contains a tab character.	41
	Expected an @return tag.	42
	Line contains a tab character.	42
	Method 'getActivations' is not designed for extension - needs to be abstract, final or empty.	42
	Line contains a tab character.	43
	Line contains a tab character.	44
	Method 'propagateToNode' is not designed for extension - needs to be abstract, final or empty.	46
	Missing a Javadoc comment.	46
	Parameter index should be final.	46

yawn/nn/Layer.java

Error		Line
	File does not end with a newline.	0

yawn/nn/Layer.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	7
	Line has trailing spaces.	9
	Line has trailing spaces.	11
	Line contains a tab character.	17
	Line has trailing spaces.	18
	Line contains a tab character.	18
	Line has trailing spaces.	19
	Line contains a tab character.	19
	Line contains a tab character.	20
	Line contains a tab character.	21
	Variable 'adapting' must be private and have accessor methods.	21
	Line contains a tab character.	23
	Line has trailing spaces.	24
	Line contains a tab character.	24
	Line has trailing spaces.	25
	Line contains a tab character.	25
	Line contains a tab character.	26
	Line contains a tab character.	27
	Variable 'inputSize' must be private and have accessor methods.	27
	Line contains a tab character.	29
	Line has trailing spaces.	30
	Line contains a tab character.	30
	Line contains a tab character.	31
	Line contains a tab character.	32
	Line contains a tab character.	33
	Line contains a tab character.	34
	Variable 'nextLayer' must be private and have accessor methods.	34
	Line contains a tab character.	36
	Line has trailing spaces.	37
	Line contains a tab character.	37
	Line contains a tab character.	38
	Line is longer than 80 characters.	39
	Line contains a tab character.	39
	Line contains a tab character.	40
	Line contains a tab character.	41
	Variable 'units' must be private and have accessor methods.	41
	Missing a Javadoc comment.	44
	Missing a Javadoc comment.	51
	Parameter nextLayer should be final.	51
	'nextLayer' hides a field.	51
	Parameter inputSize should be final.	51
	'inputSize' hides a field.	51
	Method 'connectWith' is not designed for extension - needs to be abstract, final or empty.	57
	Missing a Javadoc comment.	57
	Parameter next should be final.	57
	Method 'getActivations' is not designed for extension - needs to be abstract, final or empty.	61
	Missing a Javadoc comment.	61
	Line contains a tab character.	70
	Line has trailing spaces.	71
	Line contains a tab character.	71
	Line contains a tab character.	72
	Line contains a tab character.	73
	Expected an @return tag.	74
	Line contains a tab character.	74
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	74
	Line contains a tab character.	75
	Line contains a tab character.	76
	Method 'getNodes' is not designed for extension - needs to be abstract, final or empty.	79
	Missing a Javadoc comment.	79
	Line contains a tab character.	83
	Line contains a tab character.	84
	Line has trailing spaces.	85
	Line contains a tab character.	85
	Line contains a tab character.	86
	Line contains a tab character.	87
	Line contains a tab character.	88
	Method 'isAdapting' is not designed for extension - needs to be abstract, final or empty.	88
	Line contains a tab character.	89
	Line contains a tab character.	90
	Method 'output' is not designed for extension - needs to be abstract, final or empty.	93
	Missing a Javadoc comment.	93
	Method 'propagateToNextLayer' is not designed for extension - needs to be abstract, final or empty.	97
	Missing a Javadoc comment.	97
	Method 'reset' is not designed for extension - needs to be abstract, final or empty.	101
	Missing a Javadoc comment.	101
	'for' construct must use '{}'s.	103
	Line contains a tab character.	107
	Line contains a tab character.	108
	Line has trailing spaces.	109
	Line contains a tab character.	109
	Line contains a tab character.	110
	Line contains a tab character.	111
	Line contains a tab character.	112
	Method 'setAdapting' is not designed for extension - needs to be abstract, final or empty.	112
	Parameter adapting should be final.	112
	'adapting' hides a field.	112
	Expected @param tag for 'adapting'.	112
	Line contains a tab character.	113
	Line contains a tab character.	114
	Method 'setInput' is not designed for extension - needs to be abstract, final or empty.	117
	Missing a Javadoc comment.	117
	Parameter input should be final.	117
	Line contains a tab character.	124
	Line has trailing spaces.	125
	Line contains a tab character.	125
	Line contains a tab character.	126
	Line contains a tab character.	127
	Line contains a tab character.	128
	Method 'setInputSize' is not designed for extension - needs to be abstract, final or empty.	128
	Parameter inputSize should be final.	128
	'inputSize' hides a field.	128
	Expected @param tag for 'inputSize'.	128
	Line contains a tab character.	129
	Line contains a tab character.	130
	Method 'size' is not designed for extension - needs to be abstract, final or empty.	132
	Missing a Javadoc comment.	132

yawn/nn/NeuralNetwork.java

Error		Line
	File does not end with a newline.	0

yawn/nn/NeuralNetwork.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	15
	Line has trailing spaces.	17
	Extra HTML tag found: </p>	18
	Line has trailing spaces.	19
	Line is longer than 80 characters.	26
	Missing a Javadoc comment.	26
	Missing a Javadoc comment.	28
	Name 'log' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	28
	Line contains a tab character.	30
	Line has trailing spaces.	31
	Line contains a tab character.	31
	Line contains a tab character.	32
	Line contains a tab character.	33
	Line contains a tab character.	34
	Line contains a tab character.	35
	Line contains a tab character.	37
	Line has trailing spaces.	38
	Line contains a tab character.	38
	Line has trailing spaces.	39
	Line contains a tab character.	39
	Line contains a tab character.	40
	Line contains a tab character.	41
	Line has trailing spaces.	45
	Line has trailing spaces.	53
	Parameter input should be final.	59
	Parameter output should be final.	59
	First sentence should end with a period.	61
	Line has trailing spaces.	63
	Parameter input should be final.	68
	Line has trailing spaces.	72
	Parameter iop should be final.	76
	Missing a Javadoc comment.	78
	Missing a Javadoc comment.	80
	Line is longer than 80 characters.	82
	Missing a Javadoc comment.	82
	Parameter config should be final.	82
	Missing a Javadoc comment.	84
	Line contains a tab character.	86
	Line has trailing spaces.	87
	Line contains a tab character.	87
	Line contains a tab character.	88
	Line contains a tab character.	89
	Expected an @return tag.	90
	Line contains a tab character.	90
	Method 'getStatisticsFacility' is not designed for extension - needs to be abstract, final or empty.	90
	Line contains a tab character.	91
	Line contains a tab character.	92
	Line is longer than 80 characters.	93
	Line contains a tab character.	93
	Line is longer than 80 characters.	94
	Line contains a tab character.	94
	Line contains a tab character.	95
	Line contains a tab character.	96
	Line contains a tab character.	97
	Line contains a tab character.	98
	Line contains a tab character.	99
	Line contains a tab character.	100
	Line contains a tab character.	101
	Line contains a tab character.	102
	Line contains a tab character.	103
	Line contains a tab character.	104
	Line contains a tab character.	105
	Line contains a tab character.	106
	Line contains a tab character.	107
	First sentence should end with a period.	109
	Line contains a tab character.	109
	Line contains a tab character.	110
	Line has trailing spaces.	111
	Line contains a tab character.	111
	Line contains a tab character.	112
	Line has trailing spaces.	113
	Line contains a tab character.	113
	Line has trailing spaces.	114
	Line contains a tab character.	114
	Line contains a tab character.	115
	Line contains a tab character.	116
	Method 'isAdapting' is not designed for extension - needs to be abstract, final or empty.	123
	Line contains a tab character.	127
	Line is longer than 80 characters.	128
	Line contains a tab character.	128
	Line contains a tab character.	129
	Line has trailing spaces.	130
	Line contains a tab character.	130
	Line contains a tab character.	131
	Line contains a tab character.	132
	Line contains a tab character.	133
	Method 'getAdapting' is not designed for extension - needs to be abstract, final or empty.	133
	Line contains a tab character.	134
	Line contains a tab character.	135
	Line contains a tab character.	137
	Line contains a tab character.	138
	Line is longer than 80 characters.	139
	Line contains a tab character.	139
	Line contains a tab character.	140
	Line has trailing spaces.	141
	Line contains a tab character.	141
	Line contains a tab character.	142
	Line has trailing spaces.	143
	Line contains a tab character.	143
	Line contains a tab character.	144
	Line contains a tab character.	145
	Line contains a tab character.	146
	Method 'setAdapting' is not designed for extension - needs to be abstract, final or empty.	146
	Parameter adapting should be final.	146
	'adapting' hides a field.	146
	Expected @param tag for 'adapting'.	146
	Line contains a tab character.	147
	Line contains a tab character.	148
	Line contains a tab character.	150
	Line contains a tab character.	151
	Line contains a tab character.	152
	Line has trailing spaces.	153
	Line contains a tab character.	153
	Line contains a tab character.	154
	Line contains a tab character.	155
	Line is longer than 80 characters.	156
	Line contains a tab character.	156
	Method 'setStatisticsFacility' is not designed for extension - needs to be abstract, final or empty.	156
	Parameter statisticsFacility should be final.	156
	'statisticsFacility' hides a field.	156
	Line contains a tab character.	157
	Line contains a tab character.	158

yawn/nn/NeuralNode.java

Error		Line
	File does not end with a newline.	0

yawn/nn/NeuralNode.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	7
	Line has trailing spaces.	9
	Line contains a tab character.	15
	Line has trailing spaces.	16
	Line contains a tab character.	16
	Line contains a tab character.	17
	Line contains a tab character.	18
	Line contains a tab character.	19
	Line contains a tab character.	20
	Variable 'input' must be private and have accessor methods.	20
	Line contains a tab character.	22
	Line has trailing spaces.	23
	Line contains a tab character.	23
	Line has trailing spaces.	24
	Line contains a tab character.	24
	Line contains a tab character.	25
	Line contains a tab character.	26
	Variable 'inputSize' must be private and have accessor methods.	26
	Line contains a tab character.	28
	Line contains a tab character.	29
	Line has trailing spaces.	30
	Line contains a tab character.	30
	Line contains a tab character.	31
	Line contains a tab character.	32
	Line contains a tab character.	33
	Method 'setInputSize' is not designed for extension - needs to be abstract, final or empty.	33
	Parameter inputSize should be final.	33
	'inputSize' hides a field.	33
	Expected @param tag for 'inputSize'.	33
	Line contains a tab character.	34
	Line contains a tab character.	35
	Line contains a tab character.	37
	Line has trailing spaces.	38
	Line contains a tab character.	38
	Line contains a tab character.	39
	Line contains a tab character.	40
	Expected an @return tag.	41
	Line contains a tab character.	41
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	41
	Line contains a tab character.	42
	Line contains a tab character.	43
	Missing a Javadoc comment.	46
	Parameter inputSize should be final.	46
	'inputSize' hides a field.	46
	Method 'reset' is not designed for extension - needs to be abstract, final or empty.	53
	First sentence should end with a period.	57
	Line contains a tab character.	57
	Line contains a tab character.	58
	Line has trailing spaces.	59
	Line contains a tab character.	59
	Line contains a tab character.	60
	Line contains a tab character.	61
	Line has trailing spaces.	62
	Line contains a tab character.	62
	Line contains a tab character.	63
	Line contains a tab character.	64
	Line contains a tab character.	65
	Method 'setInput' is not designed for extension - needs to be abstract, final or empty.	65
	Parameter val should be final.	65
	Line contains a tab character.	66
	Line contains a tab character.	67
	Line contains a tab character.	68
	Method 'output' is not designed for extension - needs to be abstract, final or empty.	70
	Missing a Javadoc comment.	70
	Missing a Javadoc comment.	74
	Parameter input should be final.	74
	'input' hides a field.	74
	Method 'setInputElement' is not designed for extension - needs to be abstract, final or empty.	76
	Missing a Javadoc comment.	76
	Parameter val should be final.	76
	Parameter i should be final.	76

yawn/nn/OutputLayer.java

Error		Line
	File does not end with a newline.	0

yawn/nn/OutputLayer.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	5
	Line has trailing spaces.	7
	Parameter inputSize should be final.	16
	Expected @param tag for 'inputSize'.	16
	Method 'propagateToNextLayer' is not designed for extension - needs to be abstract, final or empty.	23
	Line is longer than 80 characters.	24

yawn/nn/appart/AppArt.java

Error		Line
	File does not end with a newline.	0

yawn/nn/appart/AppArt.java

Error		Line
	Line does not match expected header line of ' GNU GENERAL PUBLIC LICENSE'.	1
	Line has trailing spaces.	30
	Line has trailing spaces.	32
	Line has trailing spaces.	41
	Missing a Javadoc comment.	45
	Name 'log' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	45
	Line contains a tab character.	47
	Line has trailing spaces.	48
	Line contains a tab character.	48
	Line contains a tab character.	49
	Line contains a tab character.	50
	Line contains a tab character.	51
	Line contains a tab character.	52
	Variable 'f2GainControl' must be private and have accessor methods.	52
	Line contains a tab character.	54
	Line has trailing spaces.	55
	Line contains a tab character.	55
	Line contains a tab character.	56
	Line contains a tab character.	57
	Line contains a tab character.	58
	Line contains a tab character.	59
	Variable 'f2Layer' must be private and have accessor methods.	59
	Line contains a tab character.	61
	Line has trailing spaces.	62
	Line contains a tab character.	62
	Line contains a tab character.	63
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line contains a tab character.	66
	Variable 'initialDeviations' must be private and have accessor methods.	66
	Line contains a tab character.	68
	Line has trailing spaces.	69
	Line contains a tab character.	69
	Line contains a tab character.	70
	Line contains a tab character.	71
	Line contains a tab character.	72
	Line contains a tab character.	73
	Variable 'inputLayer' must be private and have accessor methods.	73
	Missing a Javadoc comment.	76
	Variable 'inputSize' must be private and have accessor methods.	76
	Missing a Javadoc comment.	77
	Variable 'outputSize' must be private and have accessor methods.	77
	Line contains a tab character.	79
	Line has trailing spaces.	80
	Line contains a tab character.	80
	Line has trailing spaces.	81
	Line contains a tab character.	81
	Line contains a tab character.	82
	Line contains a tab character.	83
	Variable 'learningRate' must be private and have accessor methods.	83
	Line contains a tab character.	85
	Line has trailing spaces.	86
	Line contains a tab character.	86
	Line has trailing spaces.	87
	Line contains a tab character.	87
	Line contains a tab character.	88
	Line contains a tab character.	89
	Variable 'matchTrackingOneShot' must be private and have accessor methods.	89
	Line contains a tab character.	91
	Line has trailing spaces.	92
	Line contains a tab character.	92
	Line has trailing spaces.	93
	Line contains a tab character.	93
	Line contains a tab character.	94
	Line contains a tab character.	95
	Variable 'maxEpochs' must be private and have accessor methods.	95
	Missing a Javadoc comment.	98
	Line contains a tab character.	100
	Line has trailing spaces.	101
	Line contains a tab character.	101
	Line contains a tab character.	102
	Line contains a tab character.	103
	Line contains a tab character.	104
	Line contains a tab character.	105
	Variable 'outputGainControl' must be private and have accessor methods.	105
	Line contains a tab character.	107
	Line has trailing spaces.	108
	Line contains a tab character.	108
	Line contains a tab character.	109
	Line contains a tab character.	110
	Line contains a tab character.	111
	Line contains a tab character.	112
	Variable 'outputLayer' must be private and have accessor methods.	112
	Line contains a tab character.	114
	Line has trailing spaces.	115
	Line contains a tab character.	115
	Line has trailing spaces.	116
	Line contains a tab character.	116
	Line contains a tab character.	117
	Line contains a tab character.	118
	Variable 'predictionError' must be private and have accessor methods.	118
	Line contains a tab character.	120
	Line has trailing spaces.	121
	Line contains a tab character.	121
	Line contains a tab character.	122
	Line contains a tab character.	123
	Line contains a tab character.	124
	Line contains a tab character.	125
	Variable 'predictionLayer' must be private and have accessor methods.	125
	Line contains a tab character.	127
	Line has trailing spaces.	128
	Line contains a tab character.	128
	Line has trailing spaces.	129
	Line contains a tab character.	129
	Line contains a tab character.	130
	Line contains a tab character.	131
	Variable 'predictionLayerLearningRate' must be private and have accessor methods.	131
	Line contains a tab character.	133
	Line has trailing spaces.	134
	Line contains a tab character.	134
	Line has trailing spaces.	135
	Line contains a tab character.	135
	Line contains a tab character.	136
	Line contains a tab character.	137
	Variable 'testMatchVigilance' must be private and have accessor methods.	137
	Line contains a tab character.	139
	Line has trailing spaces.	140
	Line contains a tab character.	140
	Line has trailing spaces.	141
	Line contains a tab character.	141
	Line contains a tab character.	142
	Line contains a tab character.	143
	Variable 'trainMatchVigilance' must be private and have accessor methods.	143
	Line contains a tab character.	145
	Line has trailing spaces.	146
	Line contains a tab character.	146
	Line has trailing spaces.	147
	Line contains a tab character.	147
	Line contains a tab character.	148
	Line contains a tab character.	149
	Variable 'useAbsoluteError' must be private and have accessor methods.	149
	Missing a Javadoc comment.	152
	Method 'computeError' is not designed for extension - needs to be abstract, final or empty.	173
	Missing a Javadoc comment.	173
	Parameter prediction should be final.	173
	Parameter expected should be final.	173
	'if' construct must use '{}'s.	174
	'else' construct must use '{}'s.	176
	Method 'doBackTrack' is not designed for extension - needs to be abstract, final or empty.	180
	Missing a Javadoc comment.	180
	Method 'doMatchTracking' is not designed for extension - needs to be abstract, final or empty.	187
	Missing a Javadoc comment.	187
	Line contains a tab character.	195
	Line contains a tab character.	196
	Line has trailing spaces.	197
	Line contains a tab character.	197
	Line contains a tab character.	198
	Line contains a tab character.	199
	Line contains a tab character.	200
	Method 'getF2Layer' is not designed for extension - needs to be abstract, final or empty.	200
	Line contains a tab character.	201
	Line contains a tab character.	202
	Line contains a tab character.	204
	Line contains a tab character.	205
	Line has trailing spaces.	206
	Line contains a tab character.	206
	Line contains a tab character.	207
	Line contains a tab character.	208
	Line contains a tab character.	209
	Method 'getInitialDeviations' is not designed for extension - needs to be abstract, final or empty.	209
	Line contains a tab character.	210
	Line contains a tab character.	211
	Line has trailing spaces.	216
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	219
	Missing a Javadoc comment.	219
	Line contains a tab character.	223
	Line contains a tab character.	224
	Line has trailing spaces.	225
	Line contains a tab character.	225
	Line contains a tab character.	226
	Line contains a tab character.	227
	Line contains a tab character.	228
	Method 'getLearningRate' is not designed for extension - needs to be abstract, final or empty.	228
	Line contains a tab character.	229
	Line contains a tab character.	230
	Line contains a tab character.	232
	Line contains a tab character.	233
	Line has trailing spaces.	234
	Line contains a tab character.	234
	Line contains a tab character.	235
	Line contains a tab character.	236
	Line contains a tab character.	237
	Method 'getMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	237
	Line contains a tab character.	238
	Line contains a tab character.	239
	Line has trailing spaces.	243
	Method 'getNeuralNetworkName' is not designed for extension - needs to be abstract, final or empty.	246
	Line has trailing spaces.	252
	Method 'getOutputSize' is not designed for extension - needs to be abstract, final or empty.	255
	Missing a Javadoc comment.	255
	Line contains a tab character.	259
	Line contains a tab character.	260
	Line has trailing spaces.	261
	Line contains a tab character.	261
	Line contains a tab character.	262
	Line contains a tab character.	263
	Line contains a tab character.	264
	Method 'getPredictionError' is not designed for extension - needs to be abstract, final or empty.	264
	Line contains a tab character.	265
	Line contains a tab character.	266
	Line contains a tab character.	268
	Line contains a tab character.	269
	Line has trailing spaces.	270
	Line contains a tab character.	270
	Line contains a tab character.	271
	Line contains a tab character.	272
	Line contains a tab character.	273
	Method 'getPredictionLayer' is not designed for extension - needs to be abstract, final or empty.	273
	Line contains a tab character.	274
	Line contains a tab character.	275
	Line contains a tab character.	277
	Line contains a tab character.	278
	Line has trailing spaces.	279
	Line contains a tab character.	279
	Line contains a tab character.	280
	Line contains a tab character.	281
	Line contains a tab character.	282
	Method 'getPredictionLayerLearningRate' is not designed for extension - needs to be abstract, final or empty.	282
	Line contains a tab character.	283
	Line contains a tab character.	284
	Line contains a tab character.	286
	Line contains a tab character.	287
	Line has trailing spaces.	288
	Line contains a tab character.	288
	Line contains a tab character.	289
	Line contains a tab character.	290
	Line contains a tab character.	291
	Method 'getTestMatchVigilance' is not designed for extension - needs to be abstract, final or empty.	291
	Line contains a tab character.	292
	Line contains a tab character.	293
	Line contains a tab character.	295
	Line contains a tab character.	296
	Line has trailing spaces.	297
	Line contains a tab character.	297
	Line contains a tab character.	298
	Line contains a tab character.	299
	Line contains a tab character.	300
	Method 'getTrainMatchVigilance' is not designed for extension - needs to be abstract, final or empty.	300
	Line contains a tab character.	301
	Line contains a tab character.	302
	Line has trailing spaces.	306
	Method 'init' is not designed for extension - needs to be abstract, final or empty.	308
	Line is longer than 80 characters.	311
	Line is longer than 80 characters.	316
	Line contains a tab character.	326
	Line contains a tab character.	327
	Line has trailing spaces.	328
	Line contains a tab character.	328
	Line contains a tab character.	329
	Line contains a tab character.	330
	Line contains a tab character.	331
	Method 'isMatchTrackingOneShot' is not designed for extension - needs to be abstract, final or empty.	331
	Line contains a tab character.	332
	Line contains a tab character.	333
	Line contains a tab character.	335
	Line contains a tab character.	336
	Line has trailing spaces.	337
	Line contains a tab character.	337
	Line contains a tab character.	338
	Line contains a tab character.	339
	Line contains a tab character.	340
	Method 'isUseAbsoluteError' is not designed for extension - needs to be abstract, final or empty.	340
	Line contains a tab character.	341
	Line contains a tab character.	342
	Method 'learn' is not designed for extension - needs to be abstract, final or empty.	345
	Missing a Javadoc comment.	345
	Parameter pat should be final.	345
	Method 'learnNewCategory' is not designed for extension - needs to be abstract, final or empty.	351
	Missing a Javadoc comment.	351
	Parameter output should be final.	351
	Line is longer than 80 characters.	361
	Method 'numberOfF2Nodes' is not designed for extension - needs to be abstract, final or empty.	372
	Missing a Javadoc comment.	372
	Method 'oneLearningStep' is not designed for extension - needs to be abstract, final or empty.	376
	Missing a Javadoc comment.	376
	Parameter input should be final.	376
	Parameter output should be final.	376
	Method 'predict' is not designed for extension - needs to be abstract, final or empty.	384
	Missing a Javadoc comment.	384
	Parameter input should be final.	384
	First sentence should end with a period.	391
	Line has trailing spaces.	394
	Method 'propagate' is not designed for extension - needs to be abstract, final or empty.	397
	Parameter output should be final.	397
	Expected @param tag for 'output'.	397
	Method 'reset' is not designed for extension - needs to be abstract, final or empty.	450
	Missing a Javadoc comment.	450
	Line is longer than 80 characters.	453
	Method 'setAdapting' is not designed for extension - needs to be abstract, final or empty.	458
	Missing a Javadoc comment.	458
	Parameter adapt should be final.	458
	Line contains a tab character.	465
	Line contains a tab character.	466
	Line contains a tab character.	467
	Line has trailing spaces.	468
	Line contains a tab character.	468
	Line contains a tab character.	469
	Line contains a tab character.	470
	Line contains a tab character.	471
	Method 'setF2GainControl' is not designed for extension - needs to be abstract, final or empty.	471
	Parameter gf2 should be final.	471
	Line contains a tab character.	472
	Line contains a tab character.	473
	Line contains a tab character.	475
	Line contains a tab character.	476
	Line contains a tab character.	477
	Line has trailing spaces.	478
	Line contains a tab character.	478
	Line contains a tab character.	479
	Line contains a tab character.	480
	Line contains a tab character.	481
	Method 'setF2Layer' is not designed for extension - needs to be abstract, final or empty.	481
	Parameter f2 should be final.	481
	Line contains a tab character.	482
	Line contains a tab character.	483
	Line contains a tab character.	485
	Line contains a tab character.	486
	Line contains a tab character.	487
	Line has trailing spaces.	488
	Line contains a tab character.	488
	Line contains a tab character.	489
	Line contains a tab character.	490
	Line contains a tab character.	491
	Method 'setInitialDeviations' is not designed for extension - needs to be abstract, final or empty.	491
	Parameter initialDeviations should be final.	491
	'initialDeviations' hides a field.	491
	Line contains a tab character.	492
	Line contains a tab character.	493
	Method 'setInput' is not designed for extension - needs to be abstract, final or empty.	496
	Missing a Javadoc comment.	496
	Parameter input should be final.	496
	Line contains a tab character.	500
	Line has trailing spaces.	501
	Line contains a tab character.	501
	Line contains a tab character.	502
	Line contains a tab character.	503
	Line contains a tab character.	504
	Method 'setLearningRate' is not designed for extension - needs to be abstract, final or empty.	504
	Parameter learningRate should be final.	504
	'learningRate' hides a field.	504
	Expected @param tag for 'learningRate'.	504
	Line contains a tab character.	505
	Line contains a tab character.	506
	Line contains a tab character.	508
	Line contains a tab character.	509
	Line contains a tab character.	510
	Line has trailing spaces.	511
	Line contains a tab character.	511
	Line contains a tab character.	512
	Line contains a tab character.	513
	Line contains a tab character.	514
	Method 'setMatchTrackingOneShot' is not designed for extension - needs to be abstract, final or empty.	514
	Parameter matchTrackingOneShot should be final.	514
	'matchTrackingOneShot' hides a field.	514
	Line contains a tab character.	515
	Line contains a tab character.	516
	Line contains a tab character.	518
	Line contains a tab character.	519
	Line contains a tab character.	520
	Line has trailing spaces.	521
	Line contains a tab character.	521
	Line contains a tab character.	522
	Line contains a tab character.	523
	Line contains a tab character.	524
	Method 'setMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	524
	Parameter maxEpochs should be final.	524
	'maxEpochs' hides a field.	524
	Line contains a tab character.	525
	Line contains a tab character.	526
	Line contains a tab character.	528
	Line contains a tab character.	529
	Line contains a tab character.	530
	Line has trailing spaces.	531
	Line contains a tab character.	531
	Line contains a tab character.	532
	Line contains a tab character.	533
	Line contains a tab character.	534
	Method 'setPredictionError' is not designed for extension - needs to be abstract, final or empty.	534
	Parameter predictionError should be final.	534
	'predictionError' hides a field.	534
	Line contains a tab character.	535
	Line contains a tab character.	536
	Line contains a tab character.	538
	Line contains a tab character.	539
	Line contains a tab character.	540
	Line has trailing spaces.	541
	Line contains a tab character.	541
	Line contains a tab character.	542
	Line contains a tab character.	543
	Line contains a tab character.	544
	Method 'setPredictionLayer' is not designed for extension - needs to be abstract, final or empty.	544
	Parameter predictionLayer should be final.	544
	'predictionLayer' hides a field.	544
	Line contains a tab character.	545
	Line contains a tab character.	546
	Line contains a tab character.	548
	Line contains a tab character.	549
	Line contains a tab character.	550
	Line has trailing spaces.	551
	Line contains a tab character.	551
	Line contains a tab character.	552
	Line contains a tab character.	553
	Line contains a tab character.	554
	Method 'setPredictionLayerLearningRate' is not designed for extension - needs to be abstract, final or empty.	554
	Line contains a tab character.	555
	Parameter predictionLayerLearningRate should be final.	555
	'predictionLayerLearningRate' hides a field.	555
	Line contains a tab character.	556
	Line contains a tab character.	557
	Line contains a tab character.	559
	Line contains a tab character.	560
	Line contains a tab character.	561
	Line has trailing spaces.	562
	Line contains a tab character.	562
	Line contains a tab character.	563
	Line contains a tab character.	564
	Line contains a tab character.	565
	Method 'setTestMatchVigilance' is not designed for extension - needs to be abstract, final or empty.	565
	Parameter testMatchVigilance should be final.	565
	'testMatchVigilance' hides a field.	565
	Line contains a tab character.	566
	Line contains a tab character.	567
	Line contains a tab character.	569
	Line contains a tab character.	570
	Line contains a tab character.	571
	Line has trailing spaces.	572
	Line contains a tab character.	572
	Line contains a tab character.	573
	Line contains a tab character.	574
	Line contains a tab character.	575
	Method 'setTrainMatchVigilance' is not designed for extension - needs to be abstract, final or empty.	575
	Parameter trainMatchVigilance should be final.	575
	'trainMatchVigilance' hides a field.	575
	Line contains a tab character.	576
	Line contains a tab character.	577
	Line has trailing spaces.	582
	Line is longer than 80 characters.	585
	Method 'setup' is not designed for extension - needs to be abstract, final or empty.	585
	Missing a Javadoc comment.	585
	Parameter config should be final.	585
	Line is longer than 80 characters.	591
	Line contains a tab character.	600
	Line has trailing spaces.	601
	Line contains a tab character.	601
	Line contains a tab character.	602
	Line contains a tab character.	603
	Line contains a tab character.	604
	Method 'setUseAbsoluteError' is not designed for extension - needs to be abstract, final or empty.	604
	Parameter error should be final.	604
	Expected @param tag for 'error'.	604
	Line contains a tab character.	605
	Line contains a tab character.	606
	Method 'setUseRelativeError' is not designed for extension - needs to be abstract, final or empty.	609
	Missing a Javadoc comment.	609
	Parameter error should be final.	609
	Line has trailing spaces.	614
	Method 'train' is not designed for extension - needs to be abstract, final or empty.	616
	Parameter iop should be final.	616
	Expected @param tag for 'iop'.	616
	Line is longer than 80 characters.	628
	Line contains a tab character.	636
	Line has trailing spaces.	637
	Line contains a tab character.	637
	Line has trailing spaces.	638
	Line contains a tab character.	638
	Line contains a tab character.	639
	Line contains a tab character.	640
	Variable 'desiredMeanSquaredError' must be private and have accessor methods.	640
	Method 'useMinimumActivationMatchTracking' is not designed for extension - needs to be abstract, final or empty.	643
	Missing a Javadoc comment.	643
	Parameter use should be final.	643
	Method 'useOneShotMatchTracking' is not designed for extension - needs to be abstract, final or empty.	647
	Missing a Javadoc comment.	647
	Parameter use should be final.	647
	First sentence should end with a period.	651
	Line has trailing spaces.	653
	Method 'yieldConfiguration' is not designed for extension - needs to be abstract, final or empty.	656
	Line contains a tab character.	670
	Line contains a tab character.	671
	Line has trailing spaces.	672
	Line contains a tab character.	672
	Line contains a tab character.	673
	Line contains a tab character.	674
	Line contains a tab character.	675
	Method 'getDesiredMeanSquaredError' is not designed for extension - needs to be abstract, final or empty.	675
	Line contains a tab character.	676
	Line contains a tab character.	677
	Line contains a tab character.	679
	Line contains a tab character.	680
	Line contains a tab character.	681
	Line has trailing spaces.	682
	Line contains a tab character.	682
	Line contains a tab character.	683
	Line contains a tab character.	684
	Line contains a tab character.	685
	Method 'setDesiredMeanSquaredError' is not designed for extension - needs to be abstract, final or empty.	685
	Parameter desiredMeanSquaredError should be final.	685
	'desiredMeanSquaredError' hides a field.	685
	Line contains a tab character.	686
	Line contains a tab character.	687

yawn/nn/appart/AppArtConfig.java

Error		Line
	File does not end with a newline.	0

yawn/nn/appart/AppArtConfig.java

Error		Line
	Line does not match expected header line of ' GNU GENERAL PUBLIC LICENSE'.	1
	First sentence should end with a period.	15
	Line has trailing spaces.	16
	Line has trailing spaces.	20
	Line contains a tab character.	26
	Line has trailing spaces.	27
	Line contains a tab character.	27
	Line contains a tab character.	28
	Line contains a tab character.	29
	Line contains a tab character.	30
	Variable 'desiredMeanSquaredError' must be private and have accessor methods.	30
	Line contains a tab character.	32
	Line has trailing spaces.	33
	Line contains a tab character.	33
	Line contains a tab character.	34
	Line contains a tab character.	35
	Line contains a tab character.	36
	Line contains a tab character.	37
	Variable 'initialDeviations' must be private and have accessor methods.	37
	Line contains a tab character.	39
	Line has trailing spaces.	40
	Line contains a tab character.	40
	Line contains a tab character.	41
	Line contains a tab character.	42
	Line contains a tab character.	43
	Variable 'learningRate' must be private and have accessor methods.	43
	Line contains a tab character.	45
	Line has trailing spaces.	46
	Line contains a tab character.	46
	Line contains a tab character.	47
	Line contains a tab character.	48
	Line contains a tab character.	49
	Variable 'matchTrackingOneShot' must be private and have accessor methods.	49
	Line contains a tab character.	51
	Line has trailing spaces.	52
	Line contains a tab character.	52
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line contains a tab character.	55
	Variable 'maxEpochs' must be private and have accessor methods.	55
	Line contains a tab character.	57
	Line has trailing spaces.	58
	Line contains a tab character.	58
	Line contains a tab character.	59
	Line contains a tab character.	60
	Line contains a tab character.	61
	Variable 'predictionError' must be private and have accessor methods.	61
	Line contains a tab character.	63
	Line has trailing spaces.	64
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line contains a tab character.	66
	Line contains a tab character.	67
	Variable 'predictionLayerLearningRate' must be private and have accessor methods.	67
	Line contains a tab character.	69
	Line has trailing spaces.	70
	Line contains a tab character.	70
	Line contains a tab character.	71
	Line contains a tab character.	72
	Line contains a tab character.	73
	Variable 'testMatchVigilance' must be private and have accessor methods.	73
	Line contains a tab character.	75
	Line has trailing spaces.	76
	Line contains a tab character.	76
	Line contains a tab character.	77
	Line contains a tab character.	78
	Line contains a tab character.	79
	Variable 'trainMatchVigilance' must be private and have accessor methods.	79
	Line contains a tab character.	81
	Line has trailing spaces.	82
	Line contains a tab character.	82
	Line contains a tab character.	83
	Line contains a tab character.	84
	Line contains a tab character.	85
	Variable 'useAbsoluteError' must be private and have accessor methods.	85
	Line contains a tab character.	87
	Line has trailing spaces.	88
	Line contains a tab character.	88
	Line contains a tab character.	89
	Line contains a tab character.	90
	Line contains a tab character.	91
	Line contains a tab character.	92
	Line contains a tab character.	94
	Line contains a tab character.	95
	Line contains a tab character.	96
	Line contains a tab character.	97
	Method 'configuredNetworkFactory' is not designed for extension - needs to be abstract, final or empty.	97
	Line contains a tab character.	98
	Line contains a tab character.	100
	Line contains a tab character.	101
	Line contains a tab character.	102
	Line contains a tab character.	103
	Line contains a tab character.	104
	Line contains a tab character.	106
	Line contains a tab character.	107
	Line contains a tab character.	109
	Line contains a tab character.	110
	Line contains a tab character.	111
	Line contains a tab character.	112
	Method 'createSampleInstance' is not designed for extension - needs to be abstract, final or empty.	112
	Line contains a tab character.	113
	Line contains a tab character.	115
	'0.4' is a magic number.	115
	Line contains a tab character.	117
	'{' is followed by whitespace.	117
	'0.1' is a magic number.	117
	'0.1' is a magic number.	117
	Line contains a tab character.	118
	Line contains a tab character.	120
	'0.1' is a magic number.	120
	Line contains a tab character.	122
	Line contains a tab character.	124
	'100' is a magic number.	124
	Line contains a tab character.	126
	'0.05' is a magic number.	126
	Line contains a tab character.	128
	'0.1' is a magic number.	128
	Line contains a tab character.	130
	'0.5' is a magic number.	130
	Line contains a tab character.	132
	'0.1' is a magic number.	132
	Line contains a tab character.	134
	Line contains a tab character.	136
	Line contains a tab character.	137
	Line contains a tab character.	139
	Line contains a tab character.	140
	Line contains a tab character.	141
	Line contains a tab character.	142
	Method 'getBindedNetworkClass' is not designed for extension - needs to be abstract, final or empty.	142
	Line contains a tab character.	143
	Line contains a tab character.	144
	Line contains a tab character.	146
	Line contains a tab character.	147
	Line contains a tab character.	148
	Line contains a tab character.	149
	Method 'getDesiredMeanSquaredError' is not designed for extension - needs to be abstract, final or empty.	149
	Line contains a tab character.	150
	Line contains a tab character.	151
	Line contains a tab character.	153
	Line contains a tab character.	154
	Line has trailing spaces.	155
	Line contains a tab character.	155
	Line contains a tab character.	156
	Line contains a tab character.	157
	Line contains a tab character.	158
	Method 'getInitialDeviations' is not designed for extension - needs to be abstract, final or empty.	158
	Line contains a tab character.	159
	Line contains a tab character.	160
	Line contains a tab character.	162
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	162
	Missing a Javadoc comment.	162
	Line contains a tab character.	163
	Line contains a tab character.	164
	Line contains a tab character.	166
	Line contains a tab character.	167
	Line has trailing spaces.	168
	Line contains a tab character.	168
	Line contains a tab character.	169
	Line contains a tab character.	170
	Line contains a tab character.	171
	Method 'getLearningRate' is not designed for extension - needs to be abstract, final or empty.	171
	Line contains a tab character.	172
	Line contains a tab character.	173
	Line contains a tab character.	175
	Line contains a tab character.	176
	Line has trailing spaces.	177
	Line contains a tab character.	177
	Line contains a tab character.	178
	Line contains a tab character.	179
	Line contains a tab character.	180
	Method 'getMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	180
	Line contains a tab character.	181
	Line contains a tab character.	182
	Line contains a tab character.	184
	Method 'getOutputSize' is not designed for extension - needs to be abstract, final or empty.	184
	Missing a Javadoc comment.	184
	Line contains a tab character.	185
	Line contains a tab character.	186
	Line contains a tab character.	188
	Line contains a tab character.	189
	Line has trailing spaces.	190
	Line contains a tab character.	190
	Line contains a tab character.	191
	Line contains a tab character.	192
	Line contains a tab character.	193
	Method 'getPredictionError' is not designed for extension - needs to be abstract, final or empty.	193
	Line contains a tab character.	194
	Line contains a tab character.	195
	Line contains a tab character.	197
	Line contains a tab character.	198
	Line has trailing spaces.	199
	Line contains a tab character.	199
	Line contains a tab character.	200
	Line contains a tab character.	201
	Line contains a tab character.	202
	Method 'getPredictionLayerLearningRate' is not designed for extension - needs to be abstract, final or empty.	202
	Line contains a tab character.	203
	Line contains a tab character.	204
	Line contains a tab character.	206
	Line contains a tab character.	207
	Line has trailing spaces.	208
	Line contains a tab character.	208
	Line contains a tab character.	209
	Line contains a tab character.	210
	Line contains a tab character.	211
	Method 'getTestMatchVigilance' is not designed for extension - needs to be abstract, final or empty.	211
	Line contains a tab character.	212
	Line contains a tab character.	213
	Line contains a tab character.	215
	Line contains a tab character.	216
	Line has trailing spaces.	217
	Line contains a tab character.	217
	Line contains a tab character.	218
	Line contains a tab character.	219
	Line contains a tab character.	220
	Method 'getTrainMatchVigilance' is not designed for extension - needs to be abstract, final or empty.	220
	Line contains a tab character.	221
	Line contains a tab character.	222
	Line contains a tab character.	224
	Line contains a tab character.	225
	Line contains a tab character.	226
	Line contains a tab character.	227
	Line contains a tab character.	228
	Line contains a tab character.	229
	Line contains a tab character.	230
	Line contains a tab character.	232
	Line contains a tab character.	233
	Line has trailing spaces.	234
	Line contains a tab character.	234
	Line contains a tab character.	235
	Line contains a tab character.	236
	Line contains a tab character.	237
	Method 'isMatchTrackingOneShot' is not designed for extension - needs to be abstract, final or empty.	237
	Line contains a tab character.	238
	Line contains a tab character.	239
	Line contains a tab character.	241
	Line contains a tab character.	242
	Line has trailing spaces.	243
	Line contains a tab character.	243
	Line contains a tab character.	244
	Line contains a tab character.	245
	Line contains a tab character.	246
	Method 'isUseAbsoluteError' is not designed for extension - needs to be abstract, final or empty.	246
	Line contains a tab character.	247
	Line contains a tab character.	248
	Line contains a tab character.	250
	Line contains a tab character.	251
	Line contains a tab character.	252
	Line contains a tab character.	253
	Line contains a tab character.	254
	Method 'setDesiredMeanSquaredError' is not designed for extension - needs to be abstract, final or empty.	254
	Parameter desiredMeanSquaredError should be final.	254
	'desiredMeanSquaredError' hides a field.	254
	Line contains a tab character.	255
	Line contains a tab character.	256
	Line contains a tab character.	258
	Line contains a tab character.	259
	Line contains a tab character.	260
	Line has trailing spaces.	261
	Line contains a tab character.	261
	Line contains a tab character.	262
	Line contains a tab character.	263
	Line contains a tab character.	264
	Method 'setInitialDeviations' is not designed for extension - needs to be abstract, final or empty.	264
	Parameter initialDeviations should be final.	264
	'initialDeviations' hides a field.	264
	Line contains a tab character.	265
	Line contains a tab character.	266
	Line contains a tab character.	268
	Line contains a tab character.	269
	Line contains a tab character.	270
	Line has trailing spaces.	271
	Line contains a tab character.	271
	Line contains a tab character.	272
	Line contains a tab character.	273
	Line contains a tab character.	274
	Method 'setLearningRate' is not designed for extension - needs to be abstract, final or empty.	274
	Parameter learningRate should be final.	274
	'learningRate' hides a field.	274
	Line contains a tab character.	275
	Line contains a tab character.	276
	Line contains a tab character.	278
	Line contains a tab character.	279
	Line contains a tab character.	280
	Line has trailing spaces.	281
	Line contains a tab character.	281
	Line contains a tab character.	282
	Line contains a tab character.	283
	Line contains a tab character.	284
	Method 'setMatchTrackingOneShot' is not designed for extension - needs to be abstract, final or empty.	284
	Parameter matchTrackingOneShot should be final.	284
	'matchTrackingOneShot' hides a field.	284
	Line contains a tab character.	285
	Line contains a tab character.	286
	Line contains a tab character.	288
	Line contains a tab character.	289
	Line contains a tab character.	290
	Line has trailing spaces.	291
	Line contains a tab character.	291
	Line contains a tab character.	292
	Line contains a tab character.	293
	Line contains a tab character.	294
	Method 'setMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	294
	Parameter maxEpochs should be final.	294
	'maxEpochs' hides a field.	294
	Line contains a tab character.	295
	Line contains a tab character.	296
	Line contains a tab character.	298
	Line contains a tab character.	299
	Line contains a tab character.	300
	Line has trailing spaces.	301
	Line contains a tab character.	301
	Line contains a tab character.	302
	Line contains a tab character.	303
	Line contains a tab character.	304
	Method 'setPredictionError' is not designed for extension - needs to be abstract, final or empty.	304
	Parameter predictionError should be final.	304
	'predictionError' hides a field.	304
	Line contains a tab character.	305
	Line contains a tab character.	306
	Line contains a tab character.	308
	Line contains a tab character.	309
	Line contains a tab character.	310
	Line has trailing spaces.	311
	Line contains a tab character.	311
	Line contains a tab character.	312
	Line contains a tab character.	313
	Line contains a tab character.	314
	Method 'setPredictionLayerLearningRate' is not designed for extension - needs to be abstract, final or empty.	314
	Line contains a tab character.	315
	Parameter predictionLayerLearningRate should be final.	315
	'predictionLayerLearningRate' hides a field.	315
	Line contains a tab character.	316
	Line contains a tab character.	317
	Line contains a tab character.	319
	Line contains a tab character.	320
	Line contains a tab character.	321
	Line has trailing spaces.	322
	Line contains a tab character.	322
	Line contains a tab character.	323
	Line contains a tab character.	324
	Line contains a tab character.	325
	Method 'setTestMatchVigilance' is not designed for extension - needs to be abstract, final or empty.	325
	Parameter testMatchVigilance should be final.	325
	'testMatchVigilance' hides a field.	325
	Line contains a tab character.	326
	Line contains a tab character.	327
	Line contains a tab character.	329
	Line contains a tab character.	330
	Line contains a tab character.	331
	Line has trailing spaces.	332
	Line contains a tab character.	332
	Line contains a tab character.	333
	Line contains a tab character.	334
	Line contains a tab character.	335
	Method 'setTrainMatchVigilance' is not designed for extension - needs to be abstract, final or empty.	335
	Parameter trainMatchVigilance should be final.	335
	'trainMatchVigilance' hides a field.	335
	Line contains a tab character.	336
	Line contains a tab character.	337
	Line contains a tab character.	339
	Line contains a tab character.	340
	Line contains a tab character.	341
	Line has trailing spaces.	342
	Line contains a tab character.	342
	Line contains a tab character.	343
	Line contains a tab character.	344
	Line contains a tab character.	345
	Method 'setUseAbsoluteError' is not designed for extension - needs to be abstract, final or empty.	345
	Parameter useAbsoluteError should be final.	345
	'useAbsoluteError' hides a field.	345
	Line contains a tab character.	346
	Line contains a tab character.	347

yawn/nn/appart/GainControlUnit.java

Error		Line
	File does not end with a newline.	0

yawn/nn/appart/GainControlUnit.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	5
	Line has trailing spaces.	7
	'public' modifier out of order with the JLS suggestions.	12
	Line contains a tab character.	14
	Line has trailing spaces.	15
	Line contains a tab character.	15
	Line has trailing spaces.	16
	Line contains a tab character.	16
	Line contains a tab character.	17
	Line contains a tab character.	18
	Variable 'rho' must be private and have accessor methods.	18
	Line contains a tab character.	20
	Line has trailing spaces.	21
	Line contains a tab character.	21
	Line contains a tab character.	22
	Line contains a tab character.	23
	Line contains a tab character.	24
	Method 'setVigilanceParameter' is not designed for extension - needs to be abstract, final or empty.	24
	Parameter val should be final.	24
	Expected @param tag for 'val'.	24
	Line contains a tab character.	25
	Line contains a tab character.	26
	Line contains a tab character.	28
	Line has trailing spaces.	29
	Line contains a tab character.	29
	Line contains a tab character.	30
	Line contains a tab character.	31
	Expected an @return tag.	32
	Line contains a tab character.	32
	Method 'getVigilanceParameter' is not designed for extension - needs to be abstract, final or empty.	32
	Line contains a tab character.	33
	Line contains a tab character.	34
	Missing a Javadoc comment.	36

yawn/nn/appart/GainControlUnitOnMatching.java

Error		Line
	File does not end with a newline.	0

yawn/nn/appart/GainControlUnitOnMatching.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	9
	Line is longer than 80 characters.	10
	Line has trailing spaces.	11
	Line contains a tab character.	17
	Line has trailing spaces.	18
	Line contains a tab character.	18
	Line contains a tab character.	19
	Line contains a tab character.	20
	Line contains a tab character.	21
	Line contains a tab character.	22
	Variable 'adjunct' must be private and have accessor methods.	22
	Line contains a tab character.	24
	Line has trailing spaces.	25
	Line contains a tab character.	25
	Line has trailing spaces.	26
	Line contains a tab character.	26
	Line contains a tab character.	27
	Line contains a tab character.	28
	Variable 'match' must be private and have accessor methods.	28
	Line contains a tab character.	30
	Line has trailing spaces.	31
	Line contains a tab character.	31
	Line has trailing spaces.	32
	Line contains a tab character.	32
	Line contains a tab character.	33
	Line contains a tab character.	34
	Variable 'rho' must be private and have accessor methods.	34
	Line contains a tab character.	36
	Line has trailing spaces.	37
	Line contains a tab character.	37
	Line has trailing spaces.	38
	Line contains a tab character.	38
	Line contains a tab character.	39
	Line contains a tab character.	40
	Variable 'rhoMin' must be private and have accessor methods.	40
	Missing a Javadoc comment.	43
	Parameter val should be final.	43
	Parameter l should be final.	43
	Method 'fires' is not designed for extension - needs to be abstract, final or empty.	51
	Missing a Javadoc comment.	51
	Line contains a tab character.	55
	Line has trailing spaces.	56
	Line contains a tab character.	56
	Line contains a tab character.	57
	Line contains a tab character.	58
	Expected an @return tag.	59
	Line contains a tab character.	59
	Method 'getVigilanceParameter' is not designed for extension - needs to be abstract, final or empty.	59
	Line contains a tab character.	60
	Line contains a tab character.	61
	Line contains a tab character.	63
	Line has trailing spaces.	64
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line contains a tab character.	66
	Expected an @return tag.	67
	Line contains a tab character.	67
	Method 'getBaseVigilanceParameter' is not designed for extension - needs to be abstract, final or empty.	67
	Line contains a tab character.	68
	Line contains a tab character.	69
	Method 'minimumActivationMatchTracking' is not designed for extension - needs to be abstract, final or empty.	72
	Missing a Javadoc comment.	72
	Line is longer than 80 characters.	79
	Line is longer than 80 characters.	80
	Method 'oneShotMatchTracking' is not designed for extension - needs to be abstract, final or empty.	87
	Missing a Javadoc comment.	87
	Line is longer than 80 characters.	94
	'-2' is a magic number.	96
	Line contains a tab character.	100
	Line has trailing spaces.	101
	Line contains a tab character.	101
	Line contains a tab character.	102
	Line contains a tab character.	103
	Line contains a tab character.	104
	Method 'setMatch' is not designed for extension - needs to be abstract, final or empty.	104
	Parameter b should be final.	104
	Expected @param tag for 'b'.	104
	Line contains a tab character.	105
	Line contains a tab character.	106
	Line contains a tab character.	108
	Line has trailing spaces.	109
	Line contains a tab character.	109
	Line contains a tab character.	110
	Line contains a tab character.	111
	Line contains a tab character.	112
	Method 'setVigilanceParameter' is not designed for extension - needs to be abstract, final or empty.	112
	Parameter val should be final.	112
	Expected @param tag for 'val'.	112
	Line contains a tab character.	113
	Line contains a tab character.	114
	Line contains a tab character.	115
	Line contains a tab character.	116
	Line is longer than 80 characters.	117
	Line contains a tab character.	117
	Line contains a tab character.	118
	Line contains a tab character.	119
	Line contains a tab character.	120

yawn/nn/appart/GainControlUnitOnOutput.java

Error		Line
	File does not end with a newline.	0

yawn/nn/appart/GainControlUnitOnOutput.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	7
	Line is longer than 80 characters.	8
	Line has trailing spaces.	9
	Line contains a tab character.	16
	Line has trailing spaces.	17
	Line contains a tab character.	17
	Line has trailing spaces.	18
	Line contains a tab character.	18
	Line contains a tab character.	19
	Line contains a tab character.	20
	Variable 'error' must be private and have accessor methods.	20
	Line contains a tab character.	22
	Line has trailing spaces.	23
	Line contains a tab character.	23
	Line has trailing spaces.	24
	Line contains a tab character.	24
	Line contains a tab character.	25
	Line contains a tab character.	26
	Variable 'rho' must be private and have accessor methods.	26
	Missing a Javadoc comment.	29
	Variable 'rhoMin' must be private and have accessor methods.	29
	Line contains a tab character.	31
	Line has trailing spaces.	32
	Line contains a tab character.	32
	Line contains a tab character.	33
	Line contains a tab character.	34
	Line contains a tab character.	35
	Method 'setVigilanceParameter' is not designed for extension - needs to be abstract, final or empty.	35
	Parameter val should be final.	35
	Expected @param tag for 'val'.	35
	Line contains a tab character.	36
	Line contains a tab character.	37
	Line contains a tab character.	39
	Line has trailing spaces.	40
	Line contains a tab character.	40
	Line contains a tab character.	41
	Line contains a tab character.	42
	Expected an @return tag.	43
	Line contains a tab character.	43
	Method 'getVigilanceParameter' is not designed for extension - needs to be abstract, final or empty.	43
	Line contains a tab character.	44
	Line contains a tab character.	45
	Method 'calculateAbsoluteError' is not designed for extension - needs to be abstract, final or empty.	48
	Missing a Javadoc comment.	48
	Parameter o should be final.	48
	Parameter y should be final.	48
	Line contains a tab character.	52
	Line has trailing spaces.	53
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line contains a tab character.	55
	Expected an @return tag.	56
	Line contains a tab character.	56
	Method 'getError' is not designed for extension - needs to be abstract, final or empty.	56
	Line contains a tab character.	57
	Line contains a tab character.	58
	Method 'calculateRelativeError' is not designed for extension - needs to be abstract, final or empty.	60
	Missing a Javadoc comment.	60
	Parameter o should be final.	60
	Parameter y should be final.	60
	Missing a Javadoc comment.	65
	Parameter val should be final.	65
	Method 'fires' is not designed for extension - needs to be abstract, final or empty.	71
	Missing a Javadoc comment.	71

yawn/nn/appart/PredictionLayer.java

Error		Line
	File does not end with a newline.	0

yawn/nn/appart/PredictionLayer.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	12
	Line has trailing spaces.	14
	Line contains a tab character.	20
	Line has trailing spaces.	21
	Line contains a tab character.	21
	Line contains a tab character.	22
	Line is longer than 80 characters.	23
	Line contains a tab character.	23
	Line contains a tab character.	24
	Line contains a tab character.	25
	Variable 'a' must be private and have accessor methods.	25
	Line contains a tab character.	27
	Line has trailing spaces.	28
	Line contains a tab character.	28
	Line contains a tab character.	29
	Line contains a tab character.	30
	Line contains a tab character.	31
	Line contains a tab character.	32
	Variable 'b' must be private and have accessor methods.	32
	Line has trailing spaces.	36
	Parameter size should be final.	44
	Parameter e should be final.	44
	Parameter l should be final.	44
	'for' construct must use '{}'s.	49
	Method 'getAUnits' is not designed for extension - needs to be abstract, final or empty.	55
	Missing a Javadoc comment.	55
	Line contains a tab character.	59
	Line has trailing spaces.	60
	Line contains a tab character.	60
	Line contains a tab character.	61
	Line contains a tab character.	62
	Expected an @return tag.	63
	Line contains a tab character.	63
	Method 'getBUnit' is not designed for extension - needs to be abstract, final or empty.	63
	Line contains a tab character.	64
	Line contains a tab character.	65
	Method 'getNodes' is not designed for extension - needs to be abstract, final or empty.	67
	Missing a Javadoc comment.	67
	Line is longer than 80 characters.	69
	Method 'learn' is not designed for extension - needs to be abstract, final or empty.	72
	Missing a Javadoc comment.	72
	Parameter y should be final.	72
	'if' construct must use '{}'s.	74
	'for' construct must use '{}'s.	77
	'if' construct must use '{}'s.	78
	'else' construct must use '{}'s.	81
	Method 'propagateToNextLayer' is not designed for extension - needs to be abstract, final or empty.	86
	Missing a Javadoc comment.	86
	Method 'reset' is not designed for extension - needs to be abstract, final or empty.	96
	Missing a Javadoc comment.	96
	'for' construct must use '{}'s.	97
	Method 'setInput' is not designed for extension - needs to be abstract, final or empty.	102
	Missing a Javadoc comment.	102
	Parameter input should be final.	102
	Method 'setLearningRate' is not designed for extension - needs to be abstract, final or empty.	110
	Missing a Javadoc comment.	110
	Parameter lcte should be final.	110
	'for' construct must use '{}'s.	112
	Method 'size' is not designed for extension - needs to be abstract, final or empty.	117
	Missing a Javadoc comment.	117
	Method 'updateWeightsStructure' is not designed for extension - needs to be abstract, final or empty.	121
	Missing a Javadoc comment.	121
	Parameter y should be final.	121
	Line is longer than 80 characters.	128
	'if' construct must use '{}'s.	131
	'else' construct must use '{}'s.	133

yawn/nn/appart/PredictionNeuralNode.java

Error		Line
	File does not end with a newline.	0

yawn/nn/appart/PredictionNeuralNode.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	8
	Line is longer than 80 characters.	9
	Line has trailing spaces.	10
	Line contains a tab character.	17
	Line has trailing spaces.	18
	Line contains a tab character.	18
	Line has trailing spaces.	19
	Line contains a tab character.	19
	Line contains a tab character.	20
	Line contains a tab character.	21
	Variable 'e' must be private and have accessor methods.	21
	Line contains a tab character.	23
	Line has trailing spaces.	24
	Line contains a tab character.	24
	Line contains a tab character.	25
	Line contains a tab character.	26
	Line contains a tab character.	27
	Line contains a tab character.	28
	Variable 'weights' must be private and have accessor methods.	28
	Missing a Javadoc comment.	31
	Parameter inputSize should be final.	31
	Parameter e1 should be final.	31
	Line has trailing spaces.	38
	Method 'activationFunction' is not designed for extension - needs to be abstract, final or empty.	41
	Parameter input should be final.	41
	Line contains a tab character.	45
	Line contains a tab character.	46
	Line has trailing spaces.	47
	Line contains a tab character.	47
	Line contains a tab character.	48
	Line contains a tab character.	49
	Line contains a tab character.	50
	Method 'getE' is not designed for extension - needs to be abstract, final or empty.	50
	Line contains a tab character.	51
	Line contains a tab character.	52
	Line has trailing spaces.	56
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	59
	Line contains a tab character.	63
	Line contains a tab character.	64
	Line has trailing spaces.	65
	Line contains a tab character.	65
	Line contains a tab character.	66
	Line contains a tab character.	67
	Line contains a tab character.	68
	Method 'getWeights' is not designed for extension - needs to be abstract, final or empty.	68
	Line contains a tab character.	69
	Line contains a tab character.	70
	Method 'learn' is not designed for extension - needs to be abstract, final or empty.	73
	Missing a Javadoc comment.	73
	Parameter v_j should be final.	73
	Name 'v_j' must match pattern '^[a-z][a-zA-Z0-9]*$'.	73
	Line contains a tab character.	82
	Line contains a tab character.	83
	Line has trailing spaces.	84
	Line contains a tab character.	84
	Line contains a tab character.	85
	Line contains a tab character.	86
	Line contains a tab character.	87
	Method 'setE' is not designed for extension - needs to be abstract, final or empty.	87
	Parameter e should be final.	87
	'e' hides a field.	87
	Expected @param tag for 'e'.	87
	Line contains a tab character.	88
	Line contains a tab character.	89
	Line contains a tab character.	91
	Line contains a tab character.	92
	Line contains a tab character.	93
	Line has trailing spaces.	94
	Line contains a tab character.	94
	Line contains a tab character.	95
	Line contains a tab character.	96
	Line contains a tab character.	97
	Method 'setWeights' is not designed for extension - needs to be abstract, final or empty.	97
	Parameter weights should be final.	97
	'weights' hides a field.	97
	Line contains a tab character.	98
	Line contains a tab character.	99
	Line has trailing spaces.	102
	Line is longer than 80 characters.	106
	Method 'updateStructure' is not designed for extension - needs to be abstract, final or empty.	106
	Parameter newInputFeature should be final.	106
	Expected @param tag for 'newInputFeature'.	106
	Parameter newWeightFeature should be final.	106
	Expected @param tag for 'newWeightFeature'.	106

yawn/nn/appart/RadialBasisFunctionsNeuralNode.java

Error		Line
	File does not end with a newline.	0

yawn/nn/appart/RadialBasisFunctionsNeuralNode.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	9
	Line is longer than 80 characters.	10
	Line has trailing spaces.	11
	Line contains a tab character.	17
	Line has trailing spaces.	18
	Line contains a tab character.	18
	Line has trailing spaces.	19
	Line contains a tab character.	19
	Line contains a tab character.	20
	Line contains a tab character.	21
	Variable 'categoryIndex' must be private and have accessor methods.	21
	Line contains a tab character.	23
	Line has trailing spaces.	24
	Line contains a tab character.	24
	Line has trailing spaces.	25
	Line contains a tab character.	25
	Line contains a tab character.	26
	Line contains a tab character.	27
	Variable 'eta' must be private and have accessor methods.	27
	Line contains a tab character.	29
	Line has trailing spaces.	30
	Line contains a tab character.	30
	Line contains a tab character.	31
	Line contains a tab character.	32
	Line contains a tab character.	33
	Line contains a tab character.	34
	Variable 'lambda' must be private and have accessor methods.	34
	Line contains a tab character.	36
	Line has trailing spaces.	37
	Line contains a tab character.	37
	Line contains a tab character.	38
	Line contains a tab character.	39
	Line contains a tab character.	40
	Line contains a tab character.	41
	Variable 'mu' must be private and have accessor methods.	41
	Line contains a tab character.	43
	Line has trailing spaces.	44
	Line contains a tab character.	44
	Line contains a tab character.	45
	Line contains a tab character.	46
	Line contains a tab character.	47
	Line contains a tab character.	48
	Variable 'sigma' must be private and have accessor methods.	48
	First sentence should end with a period.	50
	Line contains a tab character.	50
	Line contains a tab character.	51
	Line has trailing spaces.	52
	Line contains a tab character.	52
	Line has trailing spaces.	53
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line contains a tab character.	55
	Variable 'threshold' must be private and have accessor methods.	55
	Line has trailing spaces.	59
	Line is longer than 80 characters.	64
	Parameter inputSize should be final.	64
	Expected @param tag for 'inputSize'.	64
	Parameter aThreshold should be final.	64
	Expected @param tag for 'aThreshold'.	64
	Parameter aCategoryIndex should be final.	64
	Expected @param tag for 'aCategoryIndex'.	64
	Line has trailing spaces.	74
	Method 'activationFunction' is not designed for extension - needs to be abstract, final or empty.	77
	Parameter input should be final.	77
	Method 'bigG' is not designed for extension - needs to be abstract, final or empty.	86
	Missing a Javadoc comment.	86
	Method 'bigG' is not designed for extension - needs to be abstract, final or empty.	90
	Missing a Javadoc comment.	90
	Parameter input should be final.	90
	'-0.5' is a magic number.	91
	Method 'deviationsProduct' is not designed for extension - needs to be abstract, final or empty.	94
	Missing a Javadoc comment.	94
	Line contains a tab character.	102
	Line contains a tab character.	103
	Line has trailing spaces.	104
	Line contains a tab character.	104
	Line contains a tab character.	105
	Line contains a tab character.	106
	Line contains a tab character.	107
	Method 'getCategoryIndex' is not designed for extension - needs to be abstract, final or empty.	107
	Line contains a tab character.	108
	Line contains a tab character.	109
	Line contains a tab character.	111
	Line contains a tab character.	112
	Line has trailing spaces.	113
	Line contains a tab character.	113
	Line contains a tab character.	114
	Line contains a tab character.	115
	Line contains a tab character.	116
	Method 'getEta' is not designed for extension - needs to be abstract, final or empty.	116
	Line contains a tab character.	117
	Line contains a tab character.	118
	Line has trailing spaces.	122
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	125
	Line contains a tab character.	129
	Line contains a tab character.	130
	Line has trailing spaces.	131
	Line contains a tab character.	131
	Line contains a tab character.	132
	Line contains a tab character.	133
	Line contains a tab character.	134
	Method 'getLambda' is not designed for extension - needs to be abstract, final or empty.	134
	Line contains a tab character.	135
	Line contains a tab character.	136
	Line contains a tab character.	138
	Line contains a tab character.	139
	Line has trailing spaces.	140
	Line contains a tab character.	140
	Line contains a tab character.	141
	Line contains a tab character.	142
	Line contains a tab character.	143
	Method 'getMu' is not designed for extension - needs to be abstract, final or empty.	143
	Line contains a tab character.	144
	Line contains a tab character.	145
	Line contains a tab character.	147
	Line contains a tab character.	148
	Line has trailing spaces.	149
	Line contains a tab character.	149
	Line contains a tab character.	150
	Line contains a tab character.	151
	Line contains a tab character.	152
	Method 'getSigma' is not designed for extension - needs to be abstract, final or empty.	152
	Line contains a tab character.	153
	Line contains a tab character.	154
	Line contains a tab character.	156
	Line contains a tab character.	157
	Line has trailing spaces.	158
	Line contains a tab character.	158
	Line contains a tab character.	159
	Line contains a tab character.	160
	Line contains a tab character.	161
	Method 'getThreshold' is not designed for extension - needs to be abstract, final or empty.	161
	Line contains a tab character.	162
	Line contains a tab character.	163
	Method 'learn' is not designed for extension - needs to be abstract, final or empty.	166
	Missing a Javadoc comment.	166
	Parameter v should be final.	166
	Line is longer than 80 characters.	170
	Line is longer than 80 characters.	172
	Line is longer than 80 characters.	174
	Line has trailing spaces.	182
	Method 'learnNewClass' is not designed for extension - needs to be abstract, final or empty.	188
	Parameter gamma should be final.	188
	Parameter n should be final.	188
	Method 'netInput' is not designed for extension - needs to be abstract, final or empty.	199
	Missing a Javadoc comment.	199
	Method 'netInput' is not designed for extension - needs to be abstract, final or empty.	203
	Missing a Javadoc comment.	203
	Parameter input should be final.	203
	Line contains a tab character.	212
	Line contains a tab character.	213
	Line has trailing spaces.	214
	Line contains a tab character.	214
	Line contains a tab character.	215
	Line contains a tab character.	216
	Line contains a tab character.	217
	Method 'setCategoryIndex' is not designed for extension - needs to be abstract, final or empty.	217
	Parameter categoryIndex should be final.	217
	'categoryIndex' hides a field.	217
	Expected @param tag for 'categoryIndex'.	217
	Line contains a tab character.	218
	Line contains a tab character.	219
	Line contains a tab character.	221
	Line contains a tab character.	222
	Line has trailing spaces.	223
	Line contains a tab character.	223
	Line contains a tab character.	224
	Line contains a tab character.	225
	Line contains a tab character.	226
	Method 'setEta' is not designed for extension - needs to be abstract, final or empty.	226
	Parameter eta should be final.	226
	'eta' hides a field.	226
	Expected @param tag for 'eta'.	226
	Line contains a tab character.	227
	Line contains a tab character.	228
	Line contains a tab character.	230
	Line contains a tab character.	231
	Line has trailing spaces.	232
	Line contains a tab character.	232
	Line contains a tab character.	233
	Line contains a tab character.	234
	Line contains a tab character.	235
	Method 'setLambda' is not designed for extension - needs to be abstract, final or empty.	235
	Parameter lambda should be final.	235
	'lambda' hides a field.	235
	Expected @param tag for 'lambda'.	235
	Line contains a tab character.	236
	Line contains a tab character.	237
	Line contains a tab character.	239
	Line contains a tab character.	240
	Line has trailing spaces.	241
	Line contains a tab character.	241
	Line contains a tab character.	242
	Line contains a tab character.	243
	Line contains a tab character.	244
	Method 'setMu' is not designed for extension - needs to be abstract, final or empty.	244
	Parameter mu should be final.	244
	'mu' hides a field.	244
	Expected @param tag for 'mu'.	244
	Line contains a tab character.	245
	Line contains a tab character.	246
	Line contains a tab character.	248
	Line contains a tab character.	249
	Line has trailing spaces.	250
	Line contains a tab character.	250
	Line contains a tab character.	251
	Line contains a tab character.	252
	Line contains a tab character.	253
	Method 'setSigma' is not designed for extension - needs to be abstract, final or empty.	253
	Parameter sigma should be final.	253
	'sigma' hides a field.	253
	Expected @param tag for 'sigma'.	253
	Line contains a tab character.	254
	Line contains a tab character.	255
	Line contains a tab character.	257
	Line contains a tab character.	258
	Line has trailing spaces.	259
	Line contains a tab character.	259
	Line contains a tab character.	260
	Line contains a tab character.	261
	Line contains a tab character.	262
	Method 'setThreshold' is not designed for extension - needs to be abstract, final or empty.	262
	Parameter threshold should be final.	262
	'threshold' hides a field.	262
	Expected @param tag for 'threshold'.	262
	Line contains a tab character.	263
	Line contains a tab character.	264

yawn/nn/appart/RecognitionLayer.java

Error		Line
	File does not end with a newline.	0

yawn/nn/appart/RecognitionLayer.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	10
	Line has trailing spaces.	12
	Line contains a tab character.	19
	Line has trailing spaces.	20
	Line contains a tab character.	20
	Line contains a tab character.	21
	Line contains a tab character.	22
	Line contains a tab character.	23
	Line contains a tab character.	24
	Variable 'g' must be private and have accessor methods.	24
	Line contains a tab character.	26
	Line has trailing spaces.	27
	Line contains a tab character.	27
	Line contains a tab character.	28
	Line is longer than 80 characters.	29
	Line contains a tab character.	29
	Line contains a tab character.	30
	Line contains a tab character.	31
	Variable 'inputSize' must be private and have accessor methods.	31
	Line contains a tab character.	33
	Line has trailing spaces.	34
	Line contains a tab character.	34
	Line contains a tab character.	35
	Line contains a tab character.	36
	Line contains a tab character.	37
	Line contains a tab character.	38
	Variable 'normalizedActivations' must be private and have accessor methods.	38
	Missing a Javadoc comment.	41
	Variable 'normDone' must be private and have accessor methods.	41
	Line is longer than 80 characters.	43
	Missing a Javadoc comment.	43
	Parameter nextLayer should be final.	43
	Parameter aGF2 should be final.	43
	Parameter inputSize should be final.	43
	'inputSize' hides a field.	43
	Method 'calculateNormalizedActivations' is not designed for extension - needs to be abstract, final or empty.	52
	Missing a Javadoc comment.	52
	'g' hides a field.	54
	Line contains a tab character.	70
	Line has trailing spaces.	71
	Line contains a tab character.	71
	Line contains a tab character.	72
	Line contains a tab character.	73
	Expected an @return tag.	74
	Line contains a tab character.	74
	Method 'getNormalizedActivations' is not designed for extension - needs to be abstract, final or empty.	74
	Line contains a tab character.	75
	Line contains a tab character.	76
	Line contains a tab character.	77
	Line contains a tab character.	78
	Line contains a tab character.	79
	Method 'learn' is not designed for extension - needs to be abstract, final or empty.	81
	Missing a Javadoc comment.	81
	Line is longer than 80 characters.	84
	Method 'makeNewCategory' is not designed for extension - needs to be abstract, final or empty.	90
	Missing a Javadoc comment.	90
	Line is longer than 80 characters.	91
	Method 'matching' is not designed for extension - needs to be abstract, final or empty.	95
	Missing a Javadoc comment.	95
	Line is longer than 80 characters.	103
	Method 'propagateToNextLayer' is not designed for extension - needs to be abstract, final or empty.	114
	Method 'reset' is not designed for extension - needs to be abstract, final or empty.	121
	Method 'setGF2' is not designed for extension - needs to be abstract, final or empty.	127
	Missing a Javadoc comment.	127
	Parameter aGF2 should be final.	127
	Method 'setInput' is not designed for extension - needs to be abstract, final or empty.	134
	Parameter input should be final.	134

yawn/nn/appart/package.html

Error		Line
	Missing package documentation file.	0

yawn/nn/committee/CommitteeElement.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	14
	Line has trailing spaces.	16
	Line contains a tab character.	22
	Line has trailing spaces.	23
	Line contains a tab character.	23
	Line contains a tab character.	24
	Line contains a tab character.	25
	Line contains a tab character.	26
	Line contains a tab character.	27
	Variable 'networkConfig' must be private and have accessor methods.	27
	Line contains a tab character.	29
	Line has trailing spaces.	30
	Line contains a tab character.	30
	Line has trailing spaces.	31
	Line contains a tab character.	31
	Line contains a tab character.	32
	Line contains a tab character.	33
	Variable 'amount' must be private and have accessor methods.	33
	Line contains a tab character.	35
	Line contains a tab character.	36
	Line has trailing spaces.	37
	Line contains a tab character.	37
	Line contains a tab character.	38
	Line contains a tab character.	39
	Line contains a tab character.	40
	Method 'getAmount' is not designed for extension - needs to be abstract, final or empty.	40
	Line contains a tab character.	41
	Line contains a tab character.	42
	Line contains a tab character.	44
	Line contains a tab character.	45
	Line contains a tab character.	46
	Line has trailing spaces.	47
	Line contains a tab character.	47
	Line contains a tab character.	48
	Line contains a tab character.	49
	Line contains a tab character.	50
	Method 'setAmount' is not designed for extension - needs to be abstract, final or empty.	50
	Parameter amount should be final.	50
	'amount' hides a field.	50
	Line contains a tab character.	51
	Line contains a tab character.	52
	Line contains a tab character.	54
	Line contains a tab character.	55
	Line has trailing spaces.	56
	Line contains a tab character.	56
	Line contains a tab character.	57
	Line contains a tab character.	58
	Line contains a tab character.	59
	Method 'getNetworkConfig' is not designed for extension - needs to be abstract, final or empty.	59
	Line contains a tab character.	60
	Line contains a tab character.	61
	Line contains a tab character.	63
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line has trailing spaces.	66
	Line contains a tab character.	66
	Line contains a tab character.	67
	Line contains a tab character.	68
	Line contains a tab character.	69
	Method 'setNetworkConfig' is not designed for extension - needs to be abstract, final or empty.	69
	Parameter model should be final.	69
	Line contains a tab character.	70
	Line contains a tab character.	71
	Line has trailing spaces.	74
	Method 'toString' is not designed for extension - needs to be abstract, final or empty.	80
	Missing a Javadoc comment.	80
	Line is longer than 80 characters.	81

yawn/nn/committee/NetworkCommittee.java

Error		Line
	File does not end with a newline.	0

yawn/nn/committee/NetworkCommittee.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	25
	Line has trailing spaces.	27
	Line has trailing spaces.	34
	First sentence should end with a period.	38
	Line contains a tab character.	38
	Line contains a tab character.	39
	Line has trailing spaces.	40
	Line contains a tab character.	40
	Line contains a tab character.	41
	Line contains a tab character.	42
	Line contains a tab character.	43
	Line contains a tab character.	44
	Variable 'combinationFunction' must be private and have accessor methods.	44
	Line contains a tab character.	46
	Line has trailing spaces.	47
	Line contains a tab character.	47
	Line contains a tab character.	48
	Line is longer than 80 characters.	49
	Line contains a tab character.	49
	Line contains a tab character.	50
	Line contains a tab character.	51
	Variable 'committee' must be private and have accessor methods.	51
	Line contains a tab character.	53
	Line has trailing spaces.	54
	Line contains a tab character.	54
	Line has trailing spaces.	55
	Line contains a tab character.	55
	Line contains a tab character.	56
	Line contains a tab character.	57
	Variable 'serialProcessing' must be private and have accessor methods.	57
	Missing a Javadoc comment.	60
	Line has trailing spaces.	67
	Parameter combinationFunction should be final.	69
	'combinationFunction' hides a field.	69
	Expected @param tag for 'combinationFunction'.	69
	Method 'addCommitteeMembers' is not designed for extension - needs to be abstract, final or empty.	74
	Missing a Javadoc comment.	74
	Parameter member should be final.	74
	Line contains a tab character.	78
	Line has trailing spaces.	79
	Line contains a tab character.	79
	Line contains a tab character.	80
	Line contains a tab character.	81
	Expected an @return tag.	82
	Line contains a tab character.	82
	Method 'getCommitteMembers' is not designed for extension - needs to be abstract, final or empty.	82
	Line contains a tab character.	83
	Line contains a tab character.	84
	Method 'oneLearningStep' is not designed for extension - needs to be abstract, final or empty.	91
	Parameter input should be final.	91
	Expected @param tag for 'input'.	91
	Parameter output should be final.	91
	Expected @param tag for 'output'.	91
	Line has trailing spaces.	96
	Method 'predict' is not designed for extension - needs to be abstract, final or empty.	99
	Parameter input should be final.	99
	Line is longer than 80 characters.	107
	Line has trailing spaces.	111
	Method 'train' is not designed for extension - needs to be abstract, final or empty.	114
	Parameter iop should be final.	114
	Line is longer than 80 characters.	115
	Line is longer than 80 characters.	118
	Line contains a tab character.	137
	Line contains a tab character.	138
	Line has trailing spaces.	139
	Line contains a tab character.	139
	Line contains a tab character.	140
	Line contains a tab character.	141
	Line contains a tab character.	142
	Method 'getCombinationFunction' is not designed for extension - needs to be abstract, final or empty.	142
	Line contains a tab character.	143
	Line contains a tab character.	144
	Method 'getCommitteSize' is not designed for extension - needs to be abstract, final or empty.	150
	Line has trailing spaces.	156
	Method 'getNeuralNetworkName' is not designed for extension - needs to be abstract, final or empty.	159
	Missing a Javadoc comment.	159
	Line contains a tab character.	163
	Line contains a tab character.	164
	Line contains a tab character.	165
	Line has trailing spaces.	166
	Line contains a tab character.	166
	Line contains a tab character.	167
	Line contains a tab character.	168
	Line is longer than 80 characters.	169
	Line contains a tab character.	169
	Method 'setCombinationFunction' is not designed for extension - needs to be abstract, final or empty.	169
	Parameter combinationFunction should be final.	169
	'combinationFunction' hides a field.	169
	Line contains a tab character.	170
	Line contains a tab character.	171
	Line has trailing spaces.	175
	Line contains a tab character.	181
	Line has trailing spaces.	182
	Line contains a tab character.	182
	Line contains a tab character.	183
	Line contains a tab character.	184
	Line contains a tab character.	185
	Line contains a tab character.	186
	Line contains a tab character.	188
	Line has trailing spaces.	189
	Line contains a tab character.	189
	Line contains a tab character.	190
	Line contains a tab character.	191
	Line contains a tab character.	192
	Line contains a tab character.	193
	Line has trailing spaces.	196
	Parameter network should be final.	198
	'network' hides a field.	198
	Expected @param tag for 'network'.	198
	Parameter iops should be final.	198
	'iops' hides a field.	198
	Expected @param tag for 'iops'.	198
	Method 'run' is not designed for extension - needs to be abstract, final or empty.	206
	Line has trailing spaces.	213
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	216
	Missing a Javadoc comment.	216
	Line has trailing spaces.	223
	Method 'getOutputSize' is not designed for extension - needs to be abstract, final or empty.	226
	Missing a Javadoc comment.	226
	Line has trailing spaces.	233
	Line is longer than 80 characters.	236
	Method 'setup' is not designed for extension - needs to be abstract, final or empty.	236
	Missing a Javadoc comment.	236
	Parameter config should be final.	236
	Line is longer than 80 characters.	248
	Line is longer than 80 characters.	258
	Line is longer than 80 characters.	268
	Line has trailing spaces.	274
	Method 'yieldConfiguration' is not designed for extension - needs to be abstract, final or empty.	277
	Line is longer than 80 characters.	288
	Line is longer than 80 characters.	291
	Line is longer than 80 characters.	294
	Line is longer than 80 characters.	296
	Line contains a tab character.	314
	Line contains a tab character.	315
	Line has trailing spaces.	316
	Line contains a tab character.	316
	Line contains a tab character.	317
	Line contains a tab character.	318
	Line contains a tab character.	319
	Method 'isSerialProcessing' is not designed for extension - needs to be abstract, final or empty.	319
	Line contains a tab character.	320
	Line contains a tab character.	321
	Line contains a tab character.	323
	Line contains a tab character.	324
	Line contains a tab character.	325
	Line has trailing spaces.	326
	Line contains a tab character.	326
	Line contains a tab character.	327
	Line contains a tab character.	328
	Line contains a tab character.	329
	Method 'setSerialProcessing' is not designed for extension - needs to be abstract, final or empty.	329
	Parameter serialProcessing should be final.	329
	'serialProcessing' hides a field.	329
	Line contains a tab character.	330
	Line contains a tab character.	331

yawn/nn/committee/NetworkCommitteeConfig.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	20
	Line has trailing spaces.	24
	Line has trailing spaces.	27
	Line contains a tab character.	31
	Line has trailing spaces.	32
	Line contains a tab character.	32
	Line contains a tab character.	33
	Line contains a tab character.	34
	Variable 'committeeElements' must be private and have accessor methods.	34
	Line contains a tab character.	36
	Line has trailing spaces.	37
	Line contains a tab character.	37
	Line contains a tab character.	38
	Line contains a tab character.	39
	Variable 'combinationFunctionClass' must be private and have accessor methods.	39
	Line contains a tab character.	41
	Line has trailing spaces.	42
	Line contains a tab character.	42
	Line contains a tab character.	43
	Line contains a tab character.	44
	Variable 'serialProcessing' must be private and have accessor methods.	44
	Line contains a tab character.	46
	Line contains a tab character.	47
	Line contains a tab character.	48
	Line contains a tab character.	49
	Method 'isSerialProcessing' is not designed for extension - needs to be abstract, final or empty.	49
	Line contains a tab character.	50
	Line contains a tab character.	51
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line contains a tab character.	55
	Line contains a tab character.	56
	Line contains a tab character.	57
	Method 'setSerialProcessing' is not designed for extension - needs to be abstract, final or empty.	57
	Parameter serialProcessing should be final.	57
	'serialProcessing' hides a field.	57
	Line contains a tab character.	58
	Line contains a tab character.	59
	Line contains a tab character.	61
	Line contains a tab character.	62
	Line contains a tab character.	63
	Line contains a tab character.	64
	Method 'getCombinationFunctionClass' is not designed for extension - needs to be abstract, final or empty.	64
	Line contains a tab character.	65
	Line contains a tab character.	66
	Line contains a tab character.	68
	Line contains a tab character.	69
	Line contains a tab character.	70
	Line contains a tab character.	71
	Line is longer than 80 characters.	72
	Line contains a tab character.	72
	Method 'setCombinationFunctionClassName' is not designed for extension - needs to be abstract, final or empty.	72
	Parameter combinationFunctionClass should be final.	72
	'combinationFunctionClass' hides a field.	72
	Line contains a tab character.	73
	Line contains a tab character.	74
	Line contains a tab character.	76
	Line has trailing spaces.	77
	Line contains a tab character.	77
	Line contains a tab character.	78
	Line contains a tab character.	79
	Line contains a tab character.	80
	Line contains a tab character.	81
	Line contains a tab character.	82
	Line contains a tab character.	84
	Method 'addCommitteeMember' is not designed for extension - needs to be abstract, final or empty.	84
	Missing a Javadoc comment.	84
	Parameter ce should be final.	84
	Line contains a tab character.	85
	Line contains a tab character.	86
	Line contains a tab character.	88
	Line contains a tab character.	89
	Line contains a tab character.	90
	Line contains a tab character.	91
	Method 'getCommitteeElements' is not designed for extension - needs to be abstract, final or empty.	91
	Line contains a tab character.	92
	Line contains a tab character.	93
	Line contains a tab character.	95
	Line contains a tab character.	96
	Line contains a tab character.	97
	Line contains a tab character.	98
	Line contains a tab character.	99
	Method 'setCommitteeElements' is not designed for extension - needs to be abstract, final or empty.	99
	Parameter committeeElements should be final.	99
	'committeeElements' hides a field.	99
	Line contains a tab character.	100
	Line contains a tab character.	101
	Line contains a tab character.	103
	Line contains a tab character.	104
	Line has trailing spaces.	105
	Line contains a tab character.	105
	Line contains a tab character.	106
	Line contains a tab character.	107
	Line contains a tab character.	108
	Method 'getBindedNetworkClass' is not designed for extension - needs to be abstract, final or empty.	108
	Missing a Javadoc comment.	108
	Line contains a tab character.	109
	Line contains a tab character.	110
	Line contains a tab character.	112
	Line contains a tab character.	113
	Line contains a tab character.	114
	Line contains a tab character.	115
	Method 'internalValidate' is not designed for extension - needs to be abstract, final or empty.	115
	Line contains a tab character.	116
	Line is longer than 80 characters.	117
	Line contains a tab character.	117
	Line contains a tab character.	118
	Line contains a tab character.	119
	Line contains a tab character.	120
	Line contains a tab character.	121
	Line contains a tab character.	122
	Line contains a tab character.	123
	Line contains a tab character.	125
	Line contains a tab character.	126
	Line contains a tab character.	127
	Line contains a tab character.	128
	Line contains a tab character.	129
	Line contains a tab character.	130
	Line contains a tab character.	131
	Line contains a tab character.	132
	Line contains a tab character.	134
	Line contains a tab character.	135
	Line has trailing spaces.	136
	Line contains a tab character.	136
	Line contains a tab character.	137
	Line contains a tab character.	138
	Line contains a tab character.	139
	Method 'createSampleInstance' is not designed for extension - needs to be abstract, final or empty.	139
	Missing a Javadoc comment.	139
	Line contains a tab character.	140
	Line is longer than 80 characters.	142
	Line contains a tab character.	142
	Line contains a tab character.	144
	'500' is a magic number.	144
	Line contains a tab character.	145
	'0.5' is a magic number.	145
	Line contains a tab character.	146
	'0.1' is a magic number.	146
	Line contains a tab character.	148
	Line contains a tab character.	149
	Line contains a tab character.	150
	'20' is a magic number.	150
	Line contains a tab character.	152
	Line contains a tab character.	153
	Line contains a tab character.	154
	'8' is a magic number.	154
	Line contains a tab character.	156
	Line contains a tab character.	157
	Line contains a tab character.	158
	Line contains a tab character.	160
	Line contains a tab character.	162
	Line contains a tab character.	163
	Line contains a tab character.	164
	'3' is a magic number.	164
	Line contains a tab character.	166
	Line contains a tab character.	167
	Line contains a tab character.	168
	Line contains a tab character.	170
	Line contains a tab character.	171

yawn/nn/committee/functions/Average.java

Error		Line
	File does not end with a newline.	0

yawn/nn/committee/functions/Average.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	6
	Line has trailing spaces.	7
	Line has trailing spaces.	9
	Line has trailing spaces.	16
	Method 'piecewise' is not designed for extension - needs to be abstract, final or empty.	22
	Missing a Javadoc comment.	22
	Parameter x should be final.	22

yawn/nn/committee/functions/CommitteeFunction.java

Error		Line
	File does not end with a newline.	0

yawn/nn/committee/functions/CommitteeFunction.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	8
	Line has trailing spaces.	9
	Line has trailing spaces.	11
	Line has trailing spaces.	19
	Method 'assamble' is not designed for extension - needs to be abstract, final or empty.	24
	Parameter x should be final.	24
	Line has trailing spaces.	38
	Parameter x should be final.	43

yawn/nn/committee/functions/Popularity.java

Error		Line
	File does not end with a newline.	0

yawn/nn/committee/functions/Popularity.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	12
	Line has trailing spaces.	13
	Line has trailing spaces.	15
	Line has trailing spaces.	22
	Method 'piecewise' is not designed for extension - needs to be abstract, final or empty.	25
	Parameter x should be final.	25
	Line has trailing spaces.	31
	Method 'assamble' is not designed for extension - needs to be abstract, final or empty.	34
	Missing a Javadoc comment.	34
	Parameter x should be final.	34

yawn/nn/committee/functions/package.html

Error		Line
	Missing package documentation file.	0

yawn/nn/committee/package.html

Error		Line
	Missing package documentation file.	0

yawn/nn/fuzzyartmap/FuzzyArtMap.java

Error		Line
	File does not end with a newline.	0

yawn/nn/fuzzyartmap/FuzzyArtMap.java

Error		Line
	Line does not match expected header line of ' GNU GENERAL PUBLIC LICENSE'.	1
	Line has trailing spaces.	29
	Line has trailing spaces.	33
	Line has trailing spaces.	35
	Missing a Javadoc comment.	42
	Missing a Javadoc comment.	44
	Name 'log' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	44
	Line has trailing spaces.	47
	Line contains a tab character.	51
	Line has trailing spaces.	52
	Line contains a tab character.	52
	Line has trailing spaces.	53
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line contains a tab character.	55
	Variable 'alphaArtA' must be private and have accessor methods.	55
	Line contains a tab character.	57
	Line has trailing spaces.	58
	Line contains a tab character.	58
	Line has trailing spaces.	59
	Line contains a tab character.	59
	Line contains a tab character.	60
	Line contains a tab character.	61
	Variable 'alphaArtB' must be private and have accessor methods.	61
	Line contains a tab character.	63
	Line has trailing spaces.	64
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line contains a tab character.	66
	Line contains a tab character.	67
	Line contains a tab character.	68
	Variable 'artA' must be private and have accessor methods.	68
	Line contains a tab character.	70
	Line has trailing spaces.	71
	Line contains a tab character.	71
	Line contains a tab character.	72
	Line contains a tab character.	73
	Line contains a tab character.	74
	Line contains a tab character.	75
	Variable 'artB' must be private and have accessor methods.	75
	Line contains a tab character.	77
	Line has trailing spaces.	78
	Line contains a tab character.	78
	Line has trailing spaces.	79
	Line contains a tab character.	79
	Line contains a tab character.	80
	Line contains a tab character.	81
	Variable 'betaArtA' must be private and have accessor methods.	81
	Line contains a tab character.	83
	Line has trailing spaces.	84
	Line contains a tab character.	84
	Line has trailing spaces.	85
	Line contains a tab character.	85
	Line contains a tab character.	86
	Line contains a tab character.	87
	Variable 'betaArtB' must be private and have accessor methods.	87
	Line contains a tab character.	89
	Line has trailing spaces.	90
	Line contains a tab character.	90
	Line contains a tab character.	91
	Line is longer than 80 characters.	92
	Line contains a tab character.	92
	Line contains a tab character.	93
	Line contains a tab character.	94
	First sentence should end with a period.	96
	Line contains a tab character.	96
	Line contains a tab character.	97
	Line has trailing spaces.	98
	Line contains a tab character.	98
	Line has trailing spaces.	99
	Line contains a tab character.	99
	Line contains a tab character.	100
	Line contains a tab character.	101
	Variable 'epsilon' must be private and have accessor methods.	101
	Line contains a tab character.	103
	Line has trailing spaces.	104
	Line contains a tab character.	104
	Line has trailing spaces.	105
	Line contains a tab character.	105
	Line contains a tab character.	106
	Line contains a tab character.	107
	Variable 'inputSize' must be private and have accessor methods.	107
	Missing a Javadoc comment.	110
	Array brackets at illegal position.	110
	First sentence should end with a period.	112
	Line contains a tab character.	112
	Line contains a tab character.	113
	Line contains a tab character.	114
	Line has trailing spaces.	115
	Line contains a tab character.	115
	Line has trailing spaces.	116
	Line contains a tab character.	116
	Line contains a tab character.	117
	Line contains a tab character.	118
	Variable 'matchError' must be private and have accessor methods.	118
	First sentence should end with a period.	120
	Line contains a tab character.	120
	Line contains a tab character.	121
	Line has trailing spaces.	122
	Line contains a tab character.	122
	Line has trailing spaces.	123
	Line contains a tab character.	123
	Line contains a tab character.	124
	Line contains a tab character.	125
	Variable 'maxEpochs' must be private and have accessor methods.	125
	Missing a Javadoc comment.	128
	Missing a Javadoc comment.	130
	Missing a Javadoc comment.	132
	Missing a Javadoc comment.	134
	Line contains a tab character.	136
	Line has trailing spaces.	137
	Line contains a tab character.	137
	Line has trailing spaces.	138
	Line contains a tab character.	138
	Line contains a tab character.	139
	Line contains a tab character.	140
	Line contains a tab character.	142
	Line has trailing spaces.	143
	Line contains a tab character.	143
	Line has trailing spaces.	144
	Line contains a tab character.	144
	Line contains a tab character.	145
	Line contains a tab character.	146
	Variable 'outputSize' must be private and have accessor methods.	146
	Line contains a tab character.	148
	Line has trailing spaces.	149
	Line contains a tab character.	149
	Line has trailing spaces.	150
	Line contains a tab character.	150
	Line contains a tab character.	151
	Line contains a tab character.	152
	Variable 'useComplementCoding' must be private and have accessor methods.	152
	Line contains a tab character.	154
	Line has trailing spaces.	155
	Line contains a tab character.	155
	Line has trailing spaces.	156
	Line contains a tab character.	156
	Line contains a tab character.	157
	Line contains a tab character.	158
	Variable 'vigilanceArtA' must be private and have accessor methods.	158
	Line contains a tab character.	160
	Line has trailing spaces.	161
	Line contains a tab character.	161
	Line has trailing spaces.	162
	Line contains a tab character.	162
	Line contains a tab character.	163
	Line contains a tab character.	164
	Variable 'vigilanceArtB' must be private and have accessor methods.	164
	Missing a Javadoc comment.	167
	Line is longer than 80 characters.	182
	More than 7 parameters.	182
	Parameter alphaArtA should be final.	182
	'alphaArtA' hides a field.	182
	Expected @param tag for 'alphaArtA'.	182
	Parameter alphaArtB should be final.	182
	'alphaArtB' hides a field.	182
	Expected @param tag for 'alphaArtB'.	182
	Parameter betaArtA should be final.	182
	'betaArtA' hides a field.	182
	Expected @param tag for 'betaArtA'.	182
	Parameter betaArtB should be final.	182
	'betaArtB' hides a field.	182
	Expected @param tag for 'betaArtB'.	182
	Line is longer than 80 characters.	183
	Parameter epsilon should be final.	183
	'epsilon' hides a field.	183
	Expected @param tag for 'epsilon'.	183
	Parameter matchError should be final.	183
	'matchError' hides a field.	183
	Expected @param tag for 'matchError'.	183
	Parameter maxEpochs should be final.	183
	'maxEpochs' hides a field.	183
	Expected @param tag for 'maxEpochs'.	183
	Parameter useComplementCoding should be final.	183
	'useComplementCoding' hides a field.	183
	Expected @param tag for 'useComplementCoding'.	183
	Parameter vigilanceArtA should be final.	184
	'vigilanceArtA' hides a field.	184
	Expected @param tag for 'vigilanceArtA'.	184
	Parameter vigilanceArtB should be final.	184
	'vigilanceArtB' hides a field.	184
	Expected @param tag for 'vigilanceArtB'.	184
	Line has trailing spaces.	201
	Line has trailing spaces.	206
	Method 'bThenAActivation' is not designed for extension - needs to be abstract, final or empty.	213
	Parameter input should be final.	213
	Parameter output should be final.	213
	Line is longer than 80 characters.	266
	Method 'deScaleZeroOneOutput' is not designed for extension - needs to be abstract, final or empty.	289
	Missing a Javadoc comment.	289
	Parameter pat should be final.	289
	'if' construct must use '{}'s.	291
	Line is longer than 80 characters.	297
	Line has trailing spaces.	305
	Method 'getAdapterInstance' is not designed for extension - needs to be abstract, final or empty.	308
	Missing a Javadoc comment.	308
	Line is longer than 80 characters.	309
	Line contains a tab character.	312
	Line contains a tab character.	313
	Line has trailing spaces.	314
	Line contains a tab character.	314
	Line contains a tab character.	315
	Line contains a tab character.	316
	Line contains a tab character.	317
	Method 'getAlphaArtA' is not designed for extension - needs to be abstract, final or empty.	317
	Line contains a tab character.	318
	Line contains a tab character.	319
	Line contains a tab character.	321
	Line contains a tab character.	322
	Line has trailing spaces.	323
	Line contains a tab character.	323
	Line contains a tab character.	324
	Line contains a tab character.	325
	Line contains a tab character.	326
	Method 'getAlphaArtB' is not designed for extension - needs to be abstract, final or empty.	326
	Line contains a tab character.	327
	Line contains a tab character.	328
	Line contains a tab character.	330
	Line contains a tab character.	331
	Line has trailing spaces.	332
	Line contains a tab character.	332
	Line contains a tab character.	333
	Line contains a tab character.	334
	Line contains a tab character.	335
	Method 'getBetaArtA' is not designed for extension - needs to be abstract, final or empty.	335
	Line contains a tab character.	336
	Line contains a tab character.	337
	Line contains a tab character.	339
	Line contains a tab character.	340
	Line has trailing spaces.	341
	Line contains a tab character.	341
	Line contains a tab character.	342
	Line contains a tab character.	343
	Line contains a tab character.	344
	Method 'getBetaArtB' is not designed for extension - needs to be abstract, final or empty.	344
	Line contains a tab character.	345
	Line contains a tab character.	346
	Line contains a tab character.	348
	Line contains a tab character.	349
	Line has trailing spaces.	350
	Line contains a tab character.	350
	Line contains a tab character.	351
	Line contains a tab character.	352
	Line contains a tab character.	353
	Method 'getEpsilon' is not designed for extension - needs to be abstract, final or empty.	353
	Line contains a tab character.	354
	Line contains a tab character.	355
	Line contains a tab character.	357
	Line has trailing spaces.	358
	Line contains a tab character.	358
	Line contains a tab character.	359
	Line contains a tab character.	360
	Line contains a tab character.	361
	Line contains a tab character.	362
	Line has trailing spaces.	363
	Line contains a tab character.	363
	Line contains a tab character.	364
	Line contains a tab character.	365
	Line contains a tab character.	366
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	366
	Missing a Javadoc comment.	366
	Line contains a tab character.	367
	Line contains a tab character.	368
	Line contains a tab character.	370
	Line contains a tab character.	371
	Line has trailing spaces.	372
	Line contains a tab character.	372
	Line contains a tab character.	373
	Line contains a tab character.	374
	Line contains a tab character.	375
	Method 'getMatchError' is not designed for extension - needs to be abstract, final or empty.	375
	Line contains a tab character.	376
	Line contains a tab character.	377
	Line contains a tab character.	379
	Line contains a tab character.	380
	Line has trailing spaces.	381
	Line contains a tab character.	381
	Line contains a tab character.	382
	Line contains a tab character.	383
	Line contains a tab character.	384
	Method 'getMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	384
	Line contains a tab character.	385
	Line contains a tab character.	386
	Line has trailing spaces.	390
	Method 'getNeuralNetworkName' is not designed for extension - needs to be abstract, final or empty.	393
	Method 'getNumberOfArtACategories' is not designed for extension - needs to be abstract, final or empty.	397
	Missing a Javadoc comment.	397
	Method 'getNumberOfArtBCategories' is not designed for extension - needs to be abstract, final or empty.	401
	Missing a Javadoc comment.	401
	Line contains a tab character.	405
	Line contains a tab character.	406
	Line has trailing spaces.	407
	Line contains a tab character.	407
	Line contains a tab character.	408
	Line contains a tab character.	409
	Line contains a tab character.	410
	Method 'getNumberOfMismatches' is not designed for extension - needs to be abstract, final or empty.	410
	Line contains a tab character.	411
	Line contains a tab character.	412
	Line contains a tab character.	414
	Line has trailing spaces.	415
	Line contains a tab character.	415
	Line contains a tab character.	416
	Line contains a tab character.	417
	Line contains a tab character.	418
	Line contains a tab character.	419
	Line has trailing spaces.	420
	Line contains a tab character.	420
	Line contains a tab character.	421
	Line contains a tab character.	422
	Line contains a tab character.	423
	Method 'getOutputSize' is not designed for extension - needs to be abstract, final or empty.	423
	Missing a Javadoc comment.	423
	Line contains a tab character.	424
	Line contains a tab character.	425
	Line contains a tab character.	427
	Line contains a tab character.	428
	Line has trailing spaces.	429
	Line contains a tab character.	429
	Line contains a tab character.	430
	Line contains a tab character.	431
	Line contains a tab character.	432
	Method 'getVigilanceArtA' is not designed for extension - needs to be abstract, final or empty.	432
	Line contains a tab character.	433
	Line contains a tab character.	434
	Line contains a tab character.	436
	Line contains a tab character.	437
	Line has trailing spaces.	438
	Line contains a tab character.	438
	Line contains a tab character.	439
	Line contains a tab character.	440
	Line contains a tab character.	441
	Method 'getVigilanceArtB' is not designed for extension - needs to be abstract, final or empty.	441
	Line contains a tab character.	442
	Line contains a tab character.	443
	Method 'increaseSize' is not designed for extension - needs to be abstract, final or empty.	446
	Missing a Javadoc comment.	446
	Array brackets at illegal position.	449
	'for' construct must use '{}'s.	451
	Method 'init' is not designed for extension - needs to be abstract, final or empty.	456
	Missing a Javadoc comment.	456
	Line is longer than 80 characters.	458
	Line is longer than 80 characters.	460
	'for' construct must use '{}'s.	466
	Line contains a tab character.	471
	Line contains a tab character.	472
	Line has trailing spaces.	473
	Line contains a tab character.	473
	Line contains a tab character.	474
	Line contains a tab character.	475
	Line contains a tab character.	476
	Method 'isUseComplementCoding' is not designed for extension - needs to be abstract, final or empty.	476
	Line contains a tab character.	477
	Line contains a tab character.	478
	Method 'oneLearningStep' is not designed for extension - needs to be abstract, final or empty.	481
	Missing a Javadoc comment.	481
	Parameter input should be final.	481
	Parameter output should be final.	481
	Method 'predict' is not designed for extension - needs to be abstract, final or empty.	485
	Missing a Javadoc comment.	485
	Parameter input should be final.	485
	Line is longer than 80 characters.	486
	Method 'propagate' is not designed for extension - needs to be abstract, final or empty.	490
	Missing a Javadoc comment.	490
	Parameter inData should be final.	490
	Array brackets at illegal position.	490
	Method 'scaleZeroOneInput' is not designed for extension - needs to be abstract, final or empty.	498
	Missing a Javadoc comment.	498
	Parameter pat should be final.	498
	Line is longer than 80 characters.	502
	Line is longer than 80 characters.	508
	Method 'scaleZeroOneTrainingDataSet' is not designed for extension - needs to be abstract, final or empty.	508
	Missing a Javadoc comment.	508
	Parameter iops should be final.	508
	Line is longer than 80 characters.	552
	Line is longer than 80 characters.	558
	Line contains a tab character.	572
	Line contains a tab character.	573
	Line contains a tab character.	574
	Line has trailing spaces.	575
	Line contains a tab character.	575
	Line contains a tab character.	576
	Line contains a tab character.	577
	Line contains a tab character.	578
	Method 'setAlphaArtA' is not designed for extension - needs to be abstract, final or empty.	578
	Parameter alphaArtA should be final.	578
	'alphaArtA' hides a field.	578
	Line contains a tab character.	579
	Line contains a tab character.	580
	Line contains a tab character.	582
	Line contains a tab character.	583
	Line contains a tab character.	584
	Line has trailing spaces.	585
	Line contains a tab character.	585
	Line contains a tab character.	586
	Line contains a tab character.	587
	Line contains a tab character.	588
	Method 'setAlphaArtB' is not designed for extension - needs to be abstract, final or empty.	588
	Parameter alphaArtB should be final.	588
	'alphaArtB' hides a field.	588
	Line contains a tab character.	589
	Line contains a tab character.	590
	Method 'setBaseArtAVigilance' is not designed for extension - needs to be abstract, final or empty.	593
	Missing a Javadoc comment.	593
	Parameter value should be final.	593
	Line contains a tab character.	597
	Line contains a tab character.	598
	Line contains a tab character.	599
	Line has trailing spaces.	600
	Line contains a tab character.	600
	Line contains a tab character.	601
	Line contains a tab character.	602
	Line contains a tab character.	603
	Method 'setBetaArtA' is not designed for extension - needs to be abstract, final or empty.	603
	Parameter betaArtA should be final.	603
	'betaArtA' hides a field.	603
	Line contains a tab character.	604
	Line contains a tab character.	605
	Line contains a tab character.	607
	Line contains a tab character.	608
	Line contains a tab character.	609
	Line has trailing spaces.	610
	Line contains a tab character.	610
	Line contains a tab character.	611
	Line contains a tab character.	612
	Line contains a tab character.	613
	Method 'setBetaArtB' is not designed for extension - needs to be abstract, final or empty.	613
	Parameter betaArtB should be final.	613
	'betaArtB' hides a field.	613
	Line contains a tab character.	614
	Line contains a tab character.	615
	Line contains a tab character.	617
	Line contains a tab character.	618
	Line contains a tab character.	619
	Line has trailing spaces.	620
	Line contains a tab character.	620
	Line contains a tab character.	621
	Line contains a tab character.	622
	Line contains a tab character.	623
	Method 'setEpsilon' is not designed for extension - needs to be abstract, final or empty.	623
	Parameter epsilon should be final.	623
	'epsilon' hides a field.	623
	Line contains a tab character.	624
	Line contains a tab character.	625
	Line contains a tab character.	627
	Line contains a tab character.	628
	Line contains a tab character.	629
	Line has trailing spaces.	630
	Line contains a tab character.	630
	Line contains a tab character.	631
	Line contains a tab character.	632
	Line contains a tab character.	633
	Method 'setMatchError' is not designed for extension - needs to be abstract, final or empty.	633
	Parameter matchError should be final.	633
	'matchError' hides a field.	633
	Line contains a tab character.	634
	Line contains a tab character.	635
	Line contains a tab character.	637
	Line contains a tab character.	638
	Line contains a tab character.	639
	Line has trailing spaces.	640
	Line contains a tab character.	640
	Line contains a tab character.	641
	Line contains a tab character.	642
	Line contains a tab character.	643
	Method 'setMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	643
	Parameter maxEpochs should be final.	643
	'maxEpochs' hides a field.	643
	Line contains a tab character.	644
	Line contains a tab character.	645
	Line contains a tab character.	647
	Line contains a tab character.	648
	Line contains a tab character.	649
	Line has trailing spaces.	650
	Line contains a tab character.	650
	Line contains a tab character.	651
	Line contains a tab character.	652
	Line contains a tab character.	653
	Method 'setNumberOfMismatches' is not designed for extension - needs to be abstract, final or empty.	653
	Parameter numberOfMismatches should be final.	653
	'numberOfMismatches' hides a field.	653
	Line contains a tab character.	654
	Line contains a tab character.	655
	Line has trailing spaces.	660
	Line is longer than 80 characters.	663
	Method 'setup' is not designed for extension - needs to be abstract, final or empty.	663
	Missing a Javadoc comment.	663
	Parameter config should be final.	663
	Line contains a tab character.	678
	Line contains a tab character.	679
	Line contains a tab character.	680
	Line has trailing spaces.	681
	Line contains a tab character.	681
	Line contains a tab character.	682
	Line contains a tab character.	683
	Line contains a tab character.	684
	Method 'setUseComplementCoding' is not designed for extension - needs to be abstract, final or empty.	684
	Parameter useComplementCoding should be final.	684
	'useComplementCoding' hides a field.	684
	Line contains a tab character.	685
	Line contains a tab character.	686
	Line contains a tab character.	688
	Line contains a tab character.	689
	Line contains a tab character.	690
	Line has trailing spaces.	691
	Line contains a tab character.	691
	Line contains a tab character.	692
	Line contains a tab character.	693
	Line contains a tab character.	694
	Method 'setVigilanceArtA' is not designed for extension - needs to be abstract, final or empty.	694
	Parameter vigilanceArtA should be final.	694
	'vigilanceArtA' hides a field.	694
	Line contains a tab character.	695
	Line contains a tab character.	696
	Line contains a tab character.	698
	Line contains a tab character.	699
	Line contains a tab character.	700
	Line has trailing spaces.	701
	Line contains a tab character.	701
	Line contains a tab character.	702
	Line contains a tab character.	703
	Line contains a tab character.	704
	Method 'setVigilanceArtB' is not designed for extension - needs to be abstract, final or empty.	704
	Parameter vigilanceArtB should be final.	704
	'vigilanceArtB' hides a field.	704
	Line contains a tab character.	705
	Line contains a tab character.	706
	Method 'setVigilanceB' is not designed for extension - needs to be abstract, final or empty.	708
	Missing a Javadoc comment.	708
	Parameter value should be final.	708
	Method 'testPattern' is not designed for extension - needs to be abstract, final or empty.	712
	Missing a Javadoc comment.	712
	Parameter inPattern should be final.	712
	Array brackets at illegal position.	712
	Array brackets at illegal position.	718
	'0.001' is a magic number.	723
	'if' construct must use '{}'s.	725
	Line is longer than 80 characters.	727
	Method 'train' is not designed for extension - needs to be abstract, final or empty.	743
	Missing a Javadoc comment.	743
	Parameter ori should be final.	743
	Line is longer than 80 characters.	767
	Line is longer than 80 characters.	768
	Line has trailing spaces.	776
	Method 'yieldConfiguration' is not designed for extension - needs to be abstract, final or empty.	779
	Missing a Javadoc comment.	779

yawn/nn/fuzzyartmap/FuzzyArtMapConfig.java

Error		Line
	File does not end with a newline.	0

yawn/nn/fuzzyartmap/FuzzyArtMapConfig.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	8
	Line has trailing spaces.	9
	Line has trailing spaces.	11
	Line contains a tab character.	17
	Line has trailing spaces.	18
	Line contains a tab character.	18
	Line contains a tab character.	19
	Line contains a tab character.	20
	Variable 'network' must be private and have accessor methods.	20
	Line has trailing spaces.	22
	Method 'getBindedNetworkClass' is not designed for extension - needs to be abstract, final or empty.	34
	Method 'getAlphaArtA' is not designed for extension - needs to be abstract, final or empty.	41
	Method 'getAlphaArtB' is not designed for extension - needs to be abstract, final or empty.	48
	Method 'getBetaArtA' is not designed for extension - needs to be abstract, final or empty.	55
	Method 'getBetaArtB' is not designed for extension - needs to be abstract, final or empty.	62
	Method 'getEpsilon' is not designed for extension - needs to be abstract, final or empty.	69
	Method 'getMatchError' is not designed for extension - needs to be abstract, final or empty.	76
	Method 'getMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	83
	Method 'getVigilanceArtA' is not designed for extension - needs to be abstract, final or empty.	90
	Line has trailing spaces.	95
	Method 'getVigilanceArtB' is not designed for extension - needs to be abstract, final or empty.	97
	Method 'isUseComplementCoding' is not designed for extension - needs to be abstract, final or empty.	104
	Method 'setAlphaArtA' is not designed for extension - needs to be abstract, final or empty.	111
	Parameter alphaArtA should be final.	111
	Expected @param tag for 'alphaArtA'.	111
	Method 'setAlphaArtB' is not designed for extension - needs to be abstract, final or empty.	118
	Parameter alphaArtB should be final.	118
	Expected @param tag for 'alphaArtB'.	118
	Method 'setBetaArtA' is not designed for extension - needs to be abstract, final or empty.	125
	Parameter betaArtA should be final.	125
	Expected @param tag for 'betaArtA'.	125
	Method 'setBetaArtB' is not designed for extension - needs to be abstract, final or empty.	132
	Parameter betaArtB should be final.	132
	Expected @param tag for 'betaArtB'.	132
	Method 'setEpsilon' is not designed for extension - needs to be abstract, final or empty.	139
	Parameter epsilon should be final.	139
	Expected @param tag for 'epsilon'.	139
	Method 'setMatchError' is not designed for extension - needs to be abstract, final or empty.	146
	Parameter matchError should be final.	146
	Expected @param tag for 'matchError'.	146
	Method 'setMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	153
	Parameter maxEpochs should be final.	153
	Expected @param tag for 'maxEpochs'.	153
	Method 'setUseComplementCoding' is not designed for extension - needs to be abstract, final or empty.	160
	Parameter useComplementCoding should be final.	160
	Expected @param tag for 'useComplementCoding'.	160
	Method 'setVigilanceArtA' is not designed for extension - needs to be abstract, final or empty.	167
	Parameter vigilanceArtA should be final.	167
	Expected @param tag for 'vigilanceArtA'.	167
	Method 'setVigilanceArtB' is not designed for extension - needs to be abstract, final or empty.	174
	Parameter vigilanceArtB should be final.	174
	Expected @param tag for 'vigilanceArtB'.	174
	Method 'setVigilanceB' is not designed for extension - needs to be abstract, final or empty.	181
	Parameter value should be final.	181
	Expected @param tag for 'value'.	181
	Line contains a tab character.	185
	Line contains a tab character.	186
	Line contains a tab character.	187
	Line contains a tab character.	188
	Method 'createSampleInstance' is not designed for extension - needs to be abstract, final or empty.	188
	Line contains a tab character.	189
	'1000' is a magic number.	191
	'0.00000000000001' is a magic number.	193
	'0.3' is a magic number.	194
	'0.9' is a magic number.	195
	'0.00000000000001' is a magic number.	197
	'0.3' is a magic number.	198
	'0.0000000001' is a magic number.	202
	'0.001' is a magic number.	203
	Line contains a tab character.	206

yawn/nn/fuzzyartmap/FuzzyArtMapJGapAdapter.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	2
	Line has trailing spaces.	25
	Line is longer than 80 characters.	26
	Line has trailing spaces.	27
	Line is longer than 80 characters.	33
	Missing a Javadoc comment.	33
	Name 'log' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	33
	Line has trailing spaces.	36
	Line has trailing spaces.	41
	Parameter config should be final.	43
	Expected @param tag for 'config'.	43
	Line has trailing spaces.	49
	Method 'getSampleChromosome' is not designed for extension - needs to be abstract, final or empty.	52
	Missing a Javadoc comment.	52
	'0.0000000001' is a magic number.	53
	'0.0000000001' is a magic number.	54
	'{' is followed by whitespace.	64
	Method 'prepareConfig' is not designed for extension - needs to be abstract, final or empty.	71
	Missing a Javadoc comment.	71
	Line is longer than 80 characters.	86
	Method 'buildNeuralNetworkFromChromosome' is not designed for extension - needs to be abstract, final or empty.	86
	Missing a Javadoc comment.	86
	Parameter chromosome should be final.	86
	Line has trailing spaces.	98
	Line contains a tab character.	98
	Line has trailing spaces.	100
	'{' is not preceded with whitespace.	101
	Line is longer than 80 characters.	102
	Line contains a tab character.	102
	Line has trailing spaces.	107
	Line contains a tab character.	107
	Line contains a tab character.	108
	Missing a Javadoc comment.	108
	'=' is not preceded with whitespace.	108

yawn/nn/fuzzyartmap/fuzzyart/FuzzyArt.java

Error		Line
	File does not end with a newline.	0

yawn/nn/fuzzyartmap/fuzzyart/FuzzyArt.java

Error		Line
	Line does not match expected header line of ' GNU GENERAL PUBLIC LICENSE'.	1
	Line has trailing spaces.	10
	Line has trailing spaces.	12
	Line is longer than 80 characters.	17
	Missing a Javadoc comment.	17
	Name 'log' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	17
	Missing a Javadoc comment.	19
	Missing a Javadoc comment.	21
	Missing a Javadoc comment.	23
	Missing a Javadoc comment.	25
	Variable 'complementCoding' must be private and have accessor methods.	25
	Missing a Javadoc comment.	27
	Variable 'currentUncommitted' must be private and have accessor methods.	27
	Missing a Javadoc comment.	29
	Array brackets at illegal position.	29
	Line contains a tab character.	31
	Line has trailing spaces.	32
	Line contains a tab character.	32
	Line has trailing spaces.	33
	Line contains a tab character.	33
	Line contains a tab character.	34
	Line contains a tab character.	35
	Variable 'hasIncreased' must be private and have accessor methods.	35
	Line contains a tab character.	37
	Line has trailing spaces.	38
	Line contains a tab character.	38
	Line has trailing spaces.	39
	Line contains a tab character.	39
	Line contains a tab character.	40
	Line contains a tab character.	41
	Name 'I' must match pattern '^[a-z][a-zA-Z0-9]*$'.	41
	Array brackets at illegal position.	41
	Missing a Javadoc comment.	44
	Missing a Javadoc comment.	46
	Line contains a tab character.	48
	Line has trailing spaces.	49
	Line contains a tab character.	49
	Line has trailing spaces.	50
	Line contains a tab character.	50
	Line contains a tab character.	51
	Line contains a tab character.	52
	Missing a Javadoc comment.	55
	Variable 'numberUsedNodes' must be private and have accessor methods.	55
	Missing a Javadoc comment.	57
	Missing a Javadoc comment.	59
	Variable 'sumInputs' must be private and have accessor methods.	59
	Missing a Javadoc comment.	61
	Variable 'sumIW' must be private and have accessor methods.	61
	Array brackets at illegal position.	61
	Missing a Javadoc comment.	63
	Missing a Javadoc comment.	65
	Variable 'vigilance' must be private and have accessor methods.	65
	Missing a Javadoc comment.	67
	Array brackets at illegal position.	67
	Missing a Javadoc comment.	69
	Variable 'winner' must be private and have accessor methods.	69
	Line contains a tab character.	71
	Line has trailing spaces.	72
	Line contains a tab character.	72
	Line has trailing spaces.	73
	Line contains a tab character.	73
	Line contains a tab character.	74
	Line contains a tab character.	75
	Name 'Y' must match pattern '^[a-z][a-zA-Z0-9]*$'.	75
	Array brackets at illegal position.	75
	Method 'getMatchCritetionValue' is not designed for extension - needs to be abstract, final or empty.	78
	Missing a Javadoc comment.	78
	Missing a Javadoc comment.	82
	Inner assignments should be avoided.	88
	Inner assignments should be avoided.	88
	Line is longer than 80 characters.	105
	Missing a Javadoc comment.	105
	Parameter alpha should be final.	105
	'alpha' hides a field.	105
	Parameter beta should be final.	105
	'beta' hides a field.	105
	Parameter vigilance should be final.	105
	'vigilance' hides a field.	105
	Parameter numberInputs should be final.	105
	Parameter maxEpochs should be final.	105
	'maxEpochs' hides a field.	105
	Parameter complementCoding should be final.	106
	'complementCoding' hides a field.	106
	'if' construct must use '{}'s.	116
	'else' construct must use '{}'s.	118
	'for' construct must use '{}'s.	132
	Method 'activate' is not designed for extension - needs to be abstract, final or empty.	140
	Missing a Javadoc comment.	140
	'for' construct must use '{}'s.	153
	Avoid inline conditionals.	165
	'if' construct must use '{}'s.	181
	Method 'binaryTest' is not designed for extension - needs to be abstract, final or empty.	187
	Missing a Javadoc comment.	187
	Parameter numPatterns should be final.	187
	Parameter patLength should be final.	187
	Array brackets at illegal position.	188
	Method 'complementCode' is not designed for extension - needs to be abstract, final or empty.	200
	Missing a Javadoc comment.	200
	Parameter in should be final.	200
	Method 'doubleTest' is not designed for extension - needs to be abstract, final or empty.	210
	Missing a Javadoc comment.	210
	Parameter numPatterns should be final.	210
	Parameter patLength should be final.	210
	Array brackets at illegal position.	211
	Method 'getF2NodeActivation' is not designed for extension - needs to be abstract, final or empty.	223
	Missing a Javadoc comment.	223
	Parameter nodeIndex should be final.	223
	Line contains a tab character.	227
	Line has trailing spaces.	228
	Line contains a tab character.	228
	Line contains a tab character.	229
	Line contains a tab character.	230
	Expected an @return tag.	231
	Line contains a tab character.	231
	Method 'getI' is not designed for extension - needs to be abstract, final or empty.	231
	Line contains a tab character.	232
	Line contains a tab character.	233
	Method 'getNumberOfCommitedNodes' is not designed for extension - needs to be abstract, final or empty.	236
	Missing a Javadoc comment.	236
	'for' construct must use '{}'s.	238
	'if' construct must use '{}'s.	239
	Line contains a tab character.	244
	Line has trailing spaces.	245
	Line contains a tab character.	245
	Line contains a tab character.	246
	Line contains a tab character.	247
	Expected an @return tag.	248
	Line contains a tab character.	248
	Method 'getNumberOfInputs' is not designed for extension - needs to be abstract, final or empty.	248
	Line contains a tab character.	249
	Line contains a tab character.	250
	Method 'getWeightVector' is not designed for extension - needs to be abstract, final or empty.	253
	Missing a Javadoc comment.	253
	Parameter index should be final.	253
	Line contains a tab character.	257
	Line has trailing spaces.	258
	Line contains a tab character.	258
	Line contains a tab character.	259
	Line contains a tab character.	260
	Expected an @return tag.	261
	Line contains a tab character.	261
	Method 'getY' is not designed for extension - needs to be abstract, final or empty.	261
	Line contains a tab character.	262
	Line contains a tab character.	263
	Method 'hasIncreased' is not designed for extension - needs to be abstract, final or empty.	266
	Missing a Javadoc comment.	266
	Missing a Javadoc comment.	270
	Array brackets at illegal position.	273
	'for' construct must use '{}'s.	275
	Array brackets at illegal position.	279
	'for' construct must use '{}'s.	281
	Array brackets at illegal position.	285
	'for' construct must use '{}'s.	287
	Line is longer than 80 characters.	291
	Array brackets at illegal position.	291
	'for' construct must use '{}'s.	292
	'for' construct must use '{}'s.	294
	'for' construct must use '{}'s.	295
	Method 'learn' is not designed for extension - needs to be abstract, final or empty.	302
	Missing a Javadoc comment.	302
	'else' construct must use '{}'s.	313
	'for' construct must use '{}'s.	315
	Line is longer than 80 characters.	317
	Avoid inline conditionals.	317
	Method 'resetCategory' is not designed for extension - needs to be abstract, final or empty.	327
	Missing a Javadoc comment.	327
	Parameter index should be final.	327
	'for' construct must use '{}'s.	328
	Line contains a tab character.	332
	Line has trailing spaces.	333
	Line contains a tab character.	333
	Line contains a tab character.	334
	Line contains a tab character.	335
	Line contains a tab character.	336
	Method 'setIncreasedFlag' is not designed for extension - needs to be abstract, final or empty.	336
	Parameter value should be final.	336
	Expected @param tag for 'value'.	336
	Line contains a tab character.	337
	Line contains a tab character.	338
	Method 'setInputPattern' is not designed for extension - needs to be abstract, final or empty.	341
	Missing a Javadoc comment.	341
	Parameter pattern should be final.	341
	Array brackets at illegal position.	341
	Line is longer than 80 characters.	348
	Line contains a tab character.	354
	Line has trailing spaces.	355
	Line contains a tab character.	355
	Line contains a tab character.	356
	Line contains a tab character.	357
	Line contains a tab character.	358
	Method 'setNumberOfInputs' is not designed for extension - needs to be abstract, final or empty.	358
	Parameter numberOfInputs should be final.	358
	'numberOfInputs' hides a field.	358
	Expected @param tag for 'numberOfInputs'.	358
	Line contains a tab character.	359
	Line contains a tab character.	360
	Method 'train' is not designed for extension - needs to be abstract, final or empty.	362
	Missing a Javadoc comment.	362
	Parameter dataset should be final.	362
	Array brackets at illegal position.	362
	'if' construct must use '{}'s.	373
	Method 'trainCurrentPattern' is not designed for extension - needs to be abstract, final or empty.	380
	Missing a Javadoc comment.	380
	Method 'trainRandom' is not designed for extension - needs to be abstract, final or empty.	386
	Missing a Javadoc comment.	386
	Parameter dataset should be final.	386
	Array brackets at illegal position.	386
	'if' construct must use '{}'s.	398
	Method 'unComplementCode' is not designed for extension - needs to be abstract, final or empty.	405
	Missing a Javadoc comment.	405
	Parameter in should be final.	405

yawn/nn/fuzzyartmap/fuzzyart/package.html

Error		Line
	Missing package documentation file.	0

yawn/nn/fuzzyartmap/package.html

Error		Line
	Missing package documentation file.	0

yawn/nn/gasart/GasArt.java

Error		Line
	File does not end with a newline.	0

yawn/nn/gasart/GasArt.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	18
	Line has trailing spaces.	20
	Line has trailing spaces.	28
	First sentence should end with a period.	32
	Line contains a tab character.	32
	Line contains a tab character.	33
	Line has trailing spaces.	34
	Line contains a tab character.	34
	Line contains a tab character.	35
	Line is longer than 80 characters.	36
	Line contains a tab character.	36
	Line contains a tab character.	37
	Line contains a tab character.	38
	Variable 'edgesVector' must be private and have accessor methods.	38
	Missing a Javadoc comment.	40
	Variable 'bmuFact' must be private and have accessor methods.	40
	Missing a Javadoc comment.	42
	Variable 'maxAge' must be private and have accessor methods.	42
	Missing a Javadoc comment.	44
	Variable 'neighborFact' must be private and have accessor methods.	44
	Line is longer than 80 characters.	46
	Missing a Javadoc comment.	46
	More than 7 parameters.	46
	Parameter inputSize should be final.	46
	Parameter outputSize should be final.	46
	Parameter initialDeviation should be final.	46
	Parameter bmuConst should be final.	46
	Line is longer than 80 characters.	47
	Parameter neighborConst should be final.	47
	Parameter learncte should be final.	47
	Parameter matchError should be final.	47
	Parameter outError should be final.	47
	Parameter mAge should be final.	47
	Method 'clean' is not designed for extension - needs to be abstract, final or empty.	66
	Missing a Javadoc comment.	66
	'if' construct must use '{}'s.	69
	Avoid inline conditionals.	77
	Method 'computeAllLengths' is not designed for extension - needs to be abstract, final or empty.	84
	Missing a Javadoc comment.	84
	'for' construct must use '{}'s.	86
	Method 'computeAllSigmas' is not designed for extension - needs to be abstract, final or empty.	90
	Missing a Javadoc comment.	90
	Line is longer than 80 characters.	96
	'for' construct must use '{}'s.	99
	'if' construct must use '{}'s.	103
	'else' construct must use '{}'s.	105
	'for' construct must use '{}'s.	109
	Method 'doBackTrack' is not designed for extension - needs to be abstract, final or empty.	114
	Missing a Javadoc comment.	114
	Method 'doMatchTracking' is not designed for extension - needs to be abstract, final or empty.	119
	Missing a Javadoc comment.	119
	Method 'getHeaviest' is not designed for extension - needs to be abstract, final or empty.	123
	Missing a Javadoc comment.	123
	Line is longer than 80 characters.	131
	'0.5' is a magic number.	139
	Line is longer than 80 characters.	140
	Method 'learn' is not designed for extension - needs to be abstract, final or empty.	147
	Missing a Javadoc comment.	147
	Parameter p should be final.	147
	';' is not followed by whitespace.	162
	Method 'learnNewCategory' is not designed for extension - needs to be abstract, final or empty.	170
	Missing a Javadoc comment.	170
	Parameter p should be final.	170
	'if' construct must use '{}'s.	172
	';' is not followed by whitespace.	187
	Line is longer than 80 characters.	194
	'if' construct must use '{}'s.	201
	Line is longer than 80 characters.	203
	';' is not followed by whitespace.	205
	Method 'makeCentralAdapIncAgeDelOld' is not designed for extension - needs to be abstract, final or empty.	210
	Missing a Javadoc comment.	210
	Parameter Bmu should be final.	210
	Name 'Bmu' must match pattern '^[a-z][a-zA-Z0-9]*$'.	210
	Avoid inline conditionals.	219
	'if' construct must use '{}'s.	222
	Method 'makeFstSndBMUConexion' is not designed for extension - needs to be abstract, final or empty.	236
	Missing a Javadoc comment.	236
	Parameter p should be final.	236
	'if' construct must use '{}'s.	239
	Line is longer than 80 characters.	240
	Line is longer than 80 characters.	248
	Line is longer than 80 characters.	262
	Line is longer than 80 characters.	264
	Inner assignments should be avoided.	268
	Inner assignments should be avoided.	270
	'if' construct must use '{}'s.	272
	'else' construct must use '{}'s.	274
	Method 'makeNewEdge' is not designed for extension - needs to be abstract, final or empty.	279
	Missing a Javadoc comment.	279
	Parameter v1 should be final.	279
	Parameter v2 should be final.	279
	Method 'penalize' is not designed for extension - needs to be abstract, final or empty.	286
	Missing a Javadoc comment.	286
	Line is longer than 80 characters.	291

yawn/nn/gasart/GasEdge.java

Error		Line
	File does not end with a newline.	0

yawn/nn/gasart/GasEdge.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	3
	Line has trailing spaces.	5
	Line has trailing spaces.	7
	Line contains a tab character.	13
	Line has trailing spaces.	14
	Line contains a tab character.	14
	Line contains a tab character.	15
	Line is longer than 80 characters.	16
	Line contains a tab character.	16
	Line contains a tab character.	17
	Line contains a tab character.	18
	Variable 'vertexA' must be private and have accessor methods.	18
	Line contains a tab character.	20
	Line has trailing spaces.	21
	Line contains a tab character.	21
	Line contains a tab character.	22
	Line contains a tab character.	23
	Line contains a tab character.	24
	Line contains a tab character.	25
	Variable 'vertexB' must be private and have accessor methods.	25
	Missing a Javadoc comment.	27
	Variable 'age' must be private and have accessor methods.	27
	Missing a Javadoc comment.	29
	Variable 'lastLength' must be private and have accessor methods.	29
	Missing a Javadoc comment.	31
	Variable 'doneDist' must be private and have accessor methods.	31
	Missing a Javadoc comment.	33
	Parameter a should be final.	33
	Parameter b should be final.	33
	Method 'getVerAX' is not designed for extension - needs to be abstract, final or empty.	38
	Missing a Javadoc comment.	38
	Method 'getVerAY' is not designed for extension - needs to be abstract, final or empty.	42
	Missing a Javadoc comment.	42
	Method 'getVerBX' is not designed for extension - needs to be abstract, final or empty.	46
	Missing a Javadoc comment.	46
	Method 'getVerBY' is not designed for extension - needs to be abstract, final or empty.	50
	Missing a Javadoc comment.	50
	Method 'length' is not designed for extension - needs to be abstract, final or empty.	54
	Missing a Javadoc comment.	54
	Line is longer than 80 characters.	57
	Avoid inline conditionals.	57

yawn/nn/gasart/GasRecognitionLayer.java

Error		Line
	File does not end with a newline.	0

yawn/nn/gasart/GasRecognitionLayer.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	10
	Line has trailing spaces.	12
	Line is longer than 80 characters.	13
	Line has trailing spaces.	14
	Line is longer than 80 characters.	20
	Missing a Javadoc comment.	20
	Parameter nextLayer should be final.	20
	Parameter g should be final.	20
	Parameter i should be final.	20
	Method 'learn' is not designed for extension - needs to be abstract, final or empty.	24
	Missing a Javadoc comment.	24
	'if' construct must use '{}'s.	25
	Method 'getUnits' is not designed for extension - needs to be abstract, final or empty.	29
	Missing a Javadoc comment.	29
	Method 'deleteCategory' is not designed for extension - needs to be abstract, final or empty.	33
	Missing a Javadoc comment.	33
	Parameter unit should be final.	33
	First sentence should end with a period.	37
	Line has trailing spaces.	39
	Method 'calculateNormalizedActivations' is not designed for extension - needs to be abstract, final or empty.	41
	Method 'makeNewCategory' is not designed for extension - needs to be abstract, final or empty.	45
	Missing a Javadoc comment.	45
	Line is longer than 80 characters.	47
	Method 'matching' is not designed for extension - needs to be abstract, final or empty.	51
	Missing a Javadoc comment.	51
	Line is longer than 80 characters.	57
	';' is not followed by whitespace.	57
	'}' is not followed by whitespace.	65
	Method 'propagate' is not designed for extension - needs to be abstract, final or empty.	68
	Missing a Javadoc comment.	68
	'for' construct must use '{}'s.	72

yawn/nn/gasart/GasRecognitionNode.java

Error		Line
	File does not end with a newline.	0

yawn/nn/gasart/GasRecognitionNode.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	8
	Line has trailing spaces.	10
	Line is longer than 80 characters.	11
	Line has trailing spaces.	12
	Line contains a tab character.	18
	Line has trailing spaces.	19
	Line contains a tab character.	19
	Line contains a tab character.	20
	Line contains a tab character.	21
	Line contains a tab character.	22
	Line contains a tab character.	23
	Variable 'defaultSigma' must be private and have accessor methods.	23
	Missing a Javadoc comment.	26
	Variable 'inserted' must be private and have accessor methods.	26
	Line contains a tab character.	28
	Line has trailing spaces.	29
	Line contains a tab character.	29
	Line has trailing spaces.	30
	Line contains a tab character.	30
	Line contains a tab character.	31
	Line contains a tab character.	32
	Variable 'resource' must be private and have accessor methods.	32
	Missing a Javadoc comment.	35
	Variable 'second' must be private and have accessor methods.	35
	Line contains a tab character.	37
	Line has trailing spaces.	38
	Line contains a tab character.	38
	Line has trailing spaces.	39
	Line contains a tab character.	39
	Line contains a tab character.	40
	Line contains a tab character.	41
	Line contains a tab character.	42
	Line contains a tab character.	43
	Line contains a tab character.	44
	Variable 'activation' must be private and have accessor methods.	44
	Line contains a tab character.	46
	Line has trailing spaces.	47
	Line contains a tab character.	47
	Line has trailing spaces.	48
	Line contains a tab character.	48
	Line contains a tab character.	49
	Line contains a tab character.	50
	Variable 'resetActivation' must be private and have accessor methods.	50
	Line contains a tab character.	52
	Line has trailing spaces.	53
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line is longer than 80 characters.	55
	Line contains a tab character.	55
	Line contains a tab character.	56
	Line contains a tab character.	57
	Variable 'toWhoIBelong' must be private and have accessor methods.	57
	Missing a Javadoc comment.	60
	Variable 'winner' must be private and have accessor methods.	60
	Line is longer than 80 characters.	62
	Missing a Javadoc comment.	62
	Parameter inputSize should be final.	62
	Parameter aThreshold should be final.	62
	Parameter aCategoryIndex should be final.	62
	Method 'activationFuntion' is not designed for extension - needs to be abstract, final or empty.	70
	Missing a Javadoc comment.	70
	Parameter input should be final.	70
	Line is longer than 80 characters.	72
	Avoid inline conditionals.	72
	Line is longer than 80 characters.	80
	'-2' is a magic number.	82
	Method 'edgeWith' is not designed for extension - needs to be abstract, final or empty.	85
	Missing a Javadoc comment.	85
	Parameter other should be final.	85
	Line is longer than 80 characters.	91
	Avoid inline conditionals.	91
	'if' construct must use '{}'s.	92
	';' is not followed by whitespace.	95
	Method 'getActivation' is not designed for extension - needs to be abstract, final or empty.	98
	Missing a Javadoc comment.	98
	Comment matches to-do format 'TODO:'.	99
	';' is not followed by whitespace.	99
	Method 'getMu' is not designed for extension - needs to be abstract, final or empty.	102
	Missing a Javadoc comment.	102
	Parameter pos should be final.	102
	Line contains a tab character.	106
	Line has trailing spaces.	107
	Line contains a tab character.	107
	Line contains a tab character.	108
	Line contains a tab character.	109
	Line contains a tab character.	110
	Method 'incResource' is not designed for extension - needs to be abstract, final or empty.	110
	Parameter error should be final.	110
	Expected @param tag for 'error'.	110
	Line contains a tab character.	111
	Line contains a tab character.	112
	Method 'learn' is not designed for extension - needs to be abstract, final or empty.	115
	Missing a Javadoc comment.	115
	Parameter fact should be final.	115
	'{' is not followed by whitespace.	115
	'for' construct must use '{}'s.	116
	Line contains a tab character.	121
	Line has trailing spaces.	122
	Line contains a tab character.	122
	Line contains a tab character.	123
	Line contains a tab character.	124
	Line contains a tab character.	125
	Line contains a tab character.	126
	Method 'learnNewClass' is not designed for extension - needs to be abstract, final or empty.	126
	Parameter gamma should be final.	126
	Expected @param tag for 'gamma'.	126
	Parameter n should be final.	126
	Expected @param tag for 'n'.	126
	Line contains a tab character.	127
	Line is longer than 80 characters.	128
	Line contains a tab character.	128
	Line contains a tab character.	129
	Line contains a tab character.	130
	Line contains a tab character.	131
	Line is longer than 80 characters.	132
	Line contains a tab character.	132
	Line contains a tab character.	133
	Line contains a tab character.	134
	Method 'position' is not designed for extension - needs to be abstract, final or empty.	137
	Missing a Javadoc comment.	137
	Line contains a tab character.	141
	Line has trailing spaces.	142
	Line contains a tab character.	142
	Line contains a tab character.	143
	Line contains a tab character.	144
	Line contains a tab character.	145
	Method 'setActivation' is not designed for extension - needs to be abstract, final or empty.	145
	Parameter act should be final.	145
	Expected @param tag for 'act'.	145
	Line contains a tab character.	146
	Line contains a tab character.	147
	Method 'setInput' is not designed for extension - needs to be abstract, final or empty.	150
	Missing a Javadoc comment.	150
	Parameter value should be final.	150
	Parameter pos should be final.	150
	Method 'setMu' is not designed for extension - needs to be abstract, final or empty.	156
	Missing a Javadoc comment.	156
	Parameter value should be final.	156
	Parameter pos should be final.	156
	Method 'setPenality' is not designed for extension - needs to be abstract, final or empty.	160
	Missing a Javadoc comment.	160
	Parameter er should be final.	160
	Line contains a tab character.	164
	Line has trailing spaces.	165
	Line contains a tab character.	165
	Line contains a tab character.	166
	Line contains a tab character.	167
	Line contains a tab character.	168
	Method 'setResetActivation' is not designed for extension - needs to be abstract, final or empty.	168
	Parameter act should be final.	168
	Expected @param tag for 'act'.	168
	Line contains a tab character.	169
	Line contains a tab character.	170
	Method 'setSigma' is not designed for extension - needs to be abstract, final or empty.	172
	Missing a Javadoc comment.	172
	Parameter sig should be final.	172

yawn/nn/gasart/package.html

Error		Line
	Missing package documentation file.	0

yawn/nn/mlp/LayerConfig.java

Error		Line
	File does not end with a newline.	0

yawn/nn/mlp/LayerConfig.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	6
	Line has trailing spaces.	7
	Line has trailing spaces.	9
	Line contains a tab character.	15
	Line has trailing spaces.	16
	Line contains a tab character.	16
	Line has trailing spaces.	17
	Line contains a tab character.	17
	Line contains a tab character.	18
	Line contains a tab character.	19
	Variable 'size' must be private and have accessor methods.	19
	Line contains a tab character.	21
	Line has trailing spaces.	22
	Line contains a tab character.	22
	Line has trailing spaces.	23
	Line contains a tab character.	23
	Line contains a tab character.	24
	Line contains a tab character.	25
	Variable 'nodesClassFullName' must be private and have accessor methods.	25
	Missing a Javadoc comment.	28
	Line contains a tab character.	32
	Line contains a tab character.	33
	Line has trailing spaces.	34
	Line contains a tab character.	34
	Line contains a tab character.	35
	Line contains a tab character.	36
	Line contains a tab character.	37
	Method 'getNodesClassFullName' is not designed for extension - needs to be abstract, final or empty.	37
	Line contains a tab character.	38
	Line contains a tab character.	39
	Line contains a tab character.	41
	Line contains a tab character.	42
	Line contains a tab character.	43
	Line has trailing spaces.	44
	Line contains a tab character.	44
	Line contains a tab character.	45
	Line contains a tab character.	46
	Line contains a tab character.	47
	Method 'setNodesClassFullName' is not designed for extension - needs to be abstract, final or empty.	47
	Parameter className should be final.	47
	Line contains a tab character.	48
	Line contains a tab character.	49
	Line contains a tab character.	51
	Line contains a tab character.	52
	Line has trailing spaces.	53
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line contains a tab character.	55
	Line contains a tab character.	56
	Method 'getSize' is not designed for extension - needs to be abstract, final or empty.	56
	Line contains a tab character.	57
	Line contains a tab character.	58
	Line contains a tab character.	60
	Line contains a tab character.	61
	Line contains a tab character.	62
	Line has trailing spaces.	63
	Line contains a tab character.	63
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line contains a tab character.	66
	Method 'setSize' is not designed for extension - needs to be abstract, final or empty.	66
	Parameter size should be final.	66
	'size' hides a field.	66
	Line contains a tab character.	67
	Line contains a tab character.	68
	Missing a Javadoc comment.	70
	Parameter type should be final.	70
	Parameter size should be final.	70
	'size' hides a field.	70

yawn/nn/mlp/LayerElement.java

Error		Line
	File does not end with a newline.	0

yawn/nn/mlp/LayerElement.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	9
	Line has trailing spaces.	10
	Line has trailing spaces.	12
	Line contains a tab character.	18
	Line has trailing spaces.	19
	Line contains a tab character.	19
	Line has trailing spaces.	20
	Line contains a tab character.	20
	Line contains a tab character.	21
	Line contains a tab character.	22
	Variable 'size' must be private and have accessor methods.	22
	Line contains a tab character.	24
	Line has trailing spaces.	25
	Line contains a tab character.	25
	Line has trailing spaces.	26
	Line contains a tab character.	26
	Line contains a tab character.	27
	Line contains a tab character.	28
	Variable 'nodesClassName' must be private and have accessor methods.	28
	Missing a Javadoc comment.	31
	Line contains a tab character.	35
	Line contains a tab character.	36
	Line has trailing spaces.	37
	Line contains a tab character.	37
	Line contains a tab character.	38
	Line contains a tab character.	39
	Line contains a tab character.	40
	Method 'getNodesClassName' is not designed for extension - needs to be abstract, final or empty.	40
	Line contains a tab character.	41
	Line contains a tab character.	42
	Line contains a tab character.	44
	Line contains a tab character.	45
	Line contains a tab character.	46
	Line has trailing spaces.	47
	Line contains a tab character.	47
	Line contains a tab character.	48
	Line contains a tab character.	49
	Line contains a tab character.	50
	Method 'setNodesClassName' is not designed for extension - needs to be abstract, final or empty.	50
	Parameter className should be final.	50
	Line contains a tab character.	51
	Line contains a tab character.	52
	Line contains a tab character.	54
	Line contains a tab character.	55
	Line has trailing spaces.	56
	Line contains a tab character.	56
	Line contains a tab character.	57
	Line contains a tab character.	58
	Line contains a tab character.	59
	Method 'getSize' is not designed for extension - needs to be abstract, final or empty.	59
	Line contains a tab character.	60
	Line contains a tab character.	61
	Line contains a tab character.	63
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line has trailing spaces.	66
	Line contains a tab character.	66
	Line contains a tab character.	67
	Line contains a tab character.	68
	Line contains a tab character.	69
	Method 'setSize' is not designed for extension - needs to be abstract, final or empty.	69
	Parameter size should be final.	69
	'size' hides a field.	69
	Line contains a tab character.	70
	Line contains a tab character.	71
	Missing a Javadoc comment.	73
	Parameter type should be final.	73
	Parameter size should be final.	73
	'size' hides a field.	73
	Method 'toString' is not designed for extension - needs to be abstract, final or empty.	78
	Missing a Javadoc comment.	78
	Line is longer than 80 characters.	79

yawn/nn/mlp/LinearNode.java

Error		Line
	File does not end with a newline.	0

yawn/nn/mlp/LinearNode.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	8
	Line has trailing spaces.	10
	Parameter inputSize should be final.	19
	Expected @param tag for 'inputSize'.	19
	Missing a Javadoc comment.	23
	Method 'f' is not designed for extension - needs to be abstract, final or empty.	27
	Missing a Javadoc comment.	27
	Parameter x should be final.	27
	Method 'df' is not designed for extension - needs to be abstract, final or empty.	31
	Missing a Javadoc comment.	31
	Parameter x should be final.	31

yawn/nn/mlp/MLPLayer.java

Error		Line
	File does not end with a newline.	0

yawn/nn/mlp/MLPLayer.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	17
	Line has trailing spaces.	19
	Line is longer than 80 characters.	29
	Parameter nextLayer should be final.	29
	Expected @param tag for 'nextLayer'.	29
	Parameter inputSize should be final.	29
	Expected @param tag for 'inputSize'.	29
	Parameter nodesSize should be final.	29
	Expected @param tag for 'nodesSize'.	29
	Parameter nodesClass should be final.	29
	Expected @param tag for 'nodesClass'.	29
	Line has trailing spaces.	46
	Method 'setInput' is not designed for extension - needs to be abstract, final or empty.	50
	Parameter input should be final.	50
	Method 'calculateDeltasAsOutputLayer' is not designed for extension - needs to be abstract, final or empty.	56
	Missing a Javadoc comment.	56
	Parameter expectedOutputs should be final.	56
	Line is longer than 80 characters.	60
	Method 'calculateDeltasAsHiddenLayer' is not designed for extension - needs to be abstract, final or empty.	66
	Missing a Javadoc comment.	66
	Parameter nextLayerDeltas should be final.	66
	Line is longer than 80 characters.	76
	Line is longer than 80 characters.	79
	Line is longer than 80 characters.	86
	Method 'adapt' is not designed for extension - needs to be abstract, final or empty.	86
	Missing a Javadoc comment.	86
	Parameter deltas should be final.	86
	Parameter learningRate should be final.	86
	Parameter momentumRate should be final.	86
	Line is longer than 80 characters.	89

yawn/nn/mlp/MultiLayerPerceptron.java

Error		Line
	File does not end with a newline.	0

yawn/nn/mlp/MultiLayerPerceptron.java

Error		Line
	Line does not match expected header line of ' GNU GENERAL PUBLIC LICENSE'.	1
	Line has trailing spaces.	26
	Line is longer than 80 characters.	27
	Line has trailing spaces.	28
	Line has trailing spaces.	35
	Line is longer than 80 characters.	39
	Missing a Javadoc comment.	39
	Name 'log' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	39
	Missing a Javadoc comment.	41
	Variable 'currentEpoch' must be private and have accessor methods.	41
	Missing a Javadoc comment.	43
	Variable 'errorSum' must be private and have accessor methods.	43
	Line contains a tab character.	45
	Line has trailing spaces.	46
	Line contains a tab character.	46
	Line contains a tab character.	47
	Line is longer than 80 characters.	48
	Line contains a tab character.	48
	Line contains a tab character.	49
	Line contains a tab character.	50
	Variable 'layers' must be private and have accessor methods.	50
	Line contains a tab character.	52
	Line has trailing spaces.	53
	Line contains a tab character.	53
	Line has trailing spaces.	54
	Line contains a tab character.	54
	Line contains a tab character.	55
	Line contains a tab character.	56
	Variable 'learningRate' must be private and have accessor methods.	56
	Line contains a tab character.	58
	Line has trailing spaces.	59
	Line contains a tab character.	59
	Line has trailing spaces.	60
	Line contains a tab character.	60
	Line contains a tab character.	61
	Line contains a tab character.	62
	Variable 'momentumRate' must be private and have accessor methods.	62
	Line contains a tab character.	64
	Line has trailing spaces.	65
	Line contains a tab character.	65
	Line has trailing spaces.	66
	Line contains a tab character.	66
	Line contains a tab character.	67
	Line contains a tab character.	68
	Variable 'maxEpochs' must be private and have accessor methods.	68
	Line contains a tab character.	70
	Line has trailing spaces.	71
	Line contains a tab character.	71
	Line has trailing spaces.	72
	Line contains a tab character.	72
	Line contains a tab character.	73
	Line contains a tab character.	74
	Variable 'predictionError' must be private and have accessor methods.	74
	Line has trailing spaces.	78
	Method 'addLayer' is not designed for extension - needs to be abstract, final or empty.	92
	Parameter index should be final.	92
	Parameter element should be final.	92
	Method 'addLayer' is not designed for extension - needs to be abstract, final or empty.	100
	Parameter layer should be final.	100
	Method 'getLayer' is not designed for extension - needs to be abstract, final or empty.	104
	Missing a Javadoc comment.	104
	Parameter i should be final.	104
	Line contains a tab character.	108
	Line contains a tab character.	109
	Line has trailing spaces.	110
	Line contains a tab character.	110
	Line contains a tab character.	111
	Line contains a tab character.	112
	Line contains a tab character.	113
	Method 'getLayers' is not designed for extension - needs to be abstract, final or empty.	113
	Line contains a tab character.	114
	Line contains a tab character.	115
	Line contains a tab character.	117
	Line contains a tab character.	118
	Line has trailing spaces.	119
	Line contains a tab character.	119
	Line contains a tab character.	120
	Line contains a tab character.	121
	Line contains a tab character.	122
	Method 'getLearningRate' is not designed for extension - needs to be abstract, final or empty.	122
	Line contains a tab character.	123
	Line contains a tab character.	124
	Line contains a tab character.	126
	Line contains a tab character.	127
	Line has trailing spaces.	128
	Line contains a tab character.	128
	Line contains a tab character.	129
	Line contains a tab character.	130
	Line contains a tab character.	131
	Method 'getMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	131
	Line contains a tab character.	132
	Line contains a tab character.	133
	Method 'getNeuralNetworkName' is not designed for extension - needs to be abstract, final or empty.	139
	Line contains a tab character.	143
	Line contains a tab character.	144
	Line has trailing spaces.	145
	Line contains a tab character.	145
	Line contains a tab character.	146
	Line contains a tab character.	147
	Line contains a tab character.	148
	Method 'getPredictionError' is not designed for extension - needs to be abstract, final or empty.	148
	Line contains a tab character.	149
	Line contains a tab character.	150
	Line has trailing spaces.	154
	Method 'init' is not designed for extension - needs to be abstract, final or empty.	156
	Line is longer than 80 characters.	158
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	165
	Method 'layersCount' is not designed for extension - needs to be abstract, final or empty.	172
	Method 'layersIterator' is not designed for extension - needs to be abstract, final or empty.	180
	Method 'layersListIterator' is not designed for extension - needs to be abstract, final or empty.	188
	Line has trailing spaces.	202
	Method 'oneLearningStep' is not designed for extension - needs to be abstract, final or empty.	210
	Parameter input should be final.	210
	Parameter output should be final.	210
	Line is longer than 80 characters.	221
	Line is longer than 80 characters.	225
	Method 'getOutputSize' is not designed for extension - needs to be abstract, final or empty.	232
	Method 'predict' is not designed for extension - needs to be abstract, final or empty.	239
	Parameter input should be final.	239
	Method 'removeLayer' is not designed for extension - needs to be abstract, final or empty.	252
	Parameter index should be final.	252
	Expected @param tag for 'index'.	252
	Line contains a tab character.	256
	Line contains a tab character.	257
	Line contains a tab character.	258
	Line has trailing spaces.	259
	Line contains a tab character.	259
	Line contains a tab character.	260
	Line contains a tab character.	261
	Line contains a tab character.	262
	Method 'setLayers' is not designed for extension - needs to be abstract, final or empty.	262
	Parameter layers should be final.	262
	'layers' hides a field.	262
	Line contains a tab character.	263
	Line contains a tab character.	264
	Line contains a tab character.	266
	Line contains a tab character.	267
	Line contains a tab character.	268
	Line has trailing spaces.	269
	Line contains a tab character.	269
	Line contains a tab character.	270
	Line contains a tab character.	271
	Line contains a tab character.	272
	Method 'setLearningRate' is not designed for extension - needs to be abstract, final or empty.	272
	Parameter learningRate should be final.	272
	'learningRate' hides a field.	272
	Line contains a tab character.	273
	Line contains a tab character.	274
	Line contains a tab character.	276
	Line contains a tab character.	277
	Line contains a tab character.	278
	Line has trailing spaces.	279
	Line contains a tab character.	279
	Line contains a tab character.	280
	Line contains a tab character.	281
	Line contains a tab character.	282
	Method 'setMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	282
	Parameter maxEpochs should be final.	282
	'maxEpochs' hides a field.	282
	Line contains a tab character.	283
	Line contains a tab character.	284
	Line contains a tab character.	286
	Line contains a tab character.	287
	Line contains a tab character.	288
	Line has trailing spaces.	289
	Line contains a tab character.	289
	Line contains a tab character.	290
	Line contains a tab character.	291
	Line contains a tab character.	292
	Method 'setPredictionError' is not designed for extension - needs to be abstract, final or empty.	292
	Parameter predictionError should be final.	292
	'predictionError' hides a field.	292
	Line contains a tab character.	293
	Line contains a tab character.	294
	Line has trailing spaces.	298
	Method 'train' is not designed for extension - needs to be abstract, final or empty.	301
	Parameter iop should be final.	301
	Line is longer than 80 characters.	305
	Line is longer than 80 characters.	320
	Method 'setup' is not designed for extension - needs to be abstract, final or empty.	320
	Parameter config should be final.	320
	'config' hides a field.	320
	Line is longer than 80 characters.	330
	Line is longer than 80 characters.	343
	Line contains a tab character.	366
	Line has trailing spaces.	367
	Line contains a tab character.	367
	Line contains a tab character.	368
	Line contains a tab character.	369
	Line contains a tab character.	370
	Line contains a tab character.	371
	Variable 'config' must be private and have accessor methods.	371
	Method 'yieldConfiguration' is not designed for extension - needs to be abstract, final or empty.	377
	Line has trailing spaces.	382
	Line has trailing spaces.	389
	Line has trailing spaces.	394
	Line has trailing spaces.	396
	Line contains a tab character.	401
	Line contains a tab character.	402
	Line has trailing spaces.	403
	Line contains a tab character.	403
	Line contains a tab character.	404
	Line contains a tab character.	405
	Line contains a tab character.	406
	Method 'getMomentumRate' is not designed for extension - needs to be abstract, final or empty.	406
	Line contains a tab character.	407
	Line contains a tab character.	408
	Line contains a tab character.	410
	Line contains a tab character.	411
	Line contains a tab character.	412
	Line has trailing spaces.	413
	Line contains a tab character.	413
	Line contains a tab character.	414
	Line contains a tab character.	415
	Line contains a tab character.	416
	Method 'setMomentumRate' is not designed for extension - needs to be abstract, final or empty.	416
	Parameter momentumRate should be final.	416
	'momentumRate' hides a field.	416
	Line contains a tab character.	417
	Line contains a tab character.	418
	Method 'copy' is not designed for extension - needs to be abstract, final or empty.	420
	Missing a Javadoc comment.	420

yawn/nn/mlp/MultiLayerPerceptronConfig.java

Error		Line
	File does not end with a newline.	0

yawn/nn/mlp/MultiLayerPerceptronConfig.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	18
	Line is longer than 80 characters.	19
	Line has trailing spaces.	20
	Line contains a tab character.	27
	Line has trailing spaces.	28
	Line contains a tab character.	28
	Line contains a tab character.	29
	Line contains a tab character.	30
	Variable 'layerConfigs' must be private and have accessor methods.	30
	Line contains a tab character.	32
	Line has trailing spaces.	33
	Line contains a tab character.	33
	Line contains a tab character.	34
	Line contains a tab character.	35
	Variable 'learningRate' must be private and have accessor methods.	35
	Line contains a tab character.	37
	Line has trailing spaces.	38
	Line contains a tab character.	38
	Line contains a tab character.	39
	Line contains a tab character.	40
	Variable 'momentumRate' must be private and have accessor methods.	40
	Line contains a tab character.	42
	Line has trailing spaces.	43
	Line contains a tab character.	43
	Line contains a tab character.	44
	Line contains a tab character.	45
	Variable 'maxEpochs' must be private and have accessor methods.	45
	Line contains a tab character.	47
	Line has trailing spaces.	48
	Line contains a tab character.	48
	Line contains a tab character.	49
	Line contains a tab character.	50
	Variable 'predictionError' must be private and have accessor methods.	50
	Line has trailing spaces.	54
	Method 'addHiddenLayerConfig' is not designed for extension - needs to be abstract, final or empty.	60
	Missing a Javadoc comment.	60
	Parameter le should be final.	60
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line contains a tab character.	66
	Line contains a tab character.	67
	Method 'getLayerConfigs' is not designed for extension - needs to be abstract, final or empty.	67
	Line contains a tab character.	68
	Line contains a tab character.	69
	Line contains a tab character.	71
	Line contains a tab character.	72
	Line contains a tab character.	73
	Line contains a tab character.	74
	Line contains a tab character.	75
	Method 'setLayerConfigs' is not designed for extension - needs to be abstract, final or empty.	75
	Parameter layers should be final.	75
	Line contains a tab character.	76
	Line contains a tab character.	77
	Method 'internalValidate' is not designed for extension - needs to be abstract, final or empty.	83
	Line is longer than 80 characters.	89
	Line is longer than 80 characters.	93
	Line is longer than 80 characters.	97
	Line contains a tab character.	123
	Line contains a tab character.	124
	Line has trailing spaces.	125
	Line contains a tab character.	125
	Line contains a tab character.	126
	Line contains a tab character.	127
	Line contains a tab character.	128
	Method 'getLearningRate' is not designed for extension - needs to be abstract, final or empty.	128
	Line contains a tab character.	129
	Line contains a tab character.	130
	Line contains a tab character.	132
	Line contains a tab character.	133
	Line contains a tab character.	134
	Line has trailing spaces.	135
	Line contains a tab character.	135
	Line contains a tab character.	136
	Line contains a tab character.	137
	Line contains a tab character.	138
	Method 'setLearningRate' is not designed for extension - needs to be abstract, final or empty.	138
	Parameter learningRate should be final.	138
	'learningRate' hides a field.	138
	Line contains a tab character.	139
	Line contains a tab character.	140
	Line contains a tab character.	142
	Line contains a tab character.	143
	Line has trailing spaces.	144
	Line contains a tab character.	144
	Line contains a tab character.	145
	Line contains a tab character.	146
	Line contains a tab character.	147
	Method 'getMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	147
	Line contains a tab character.	148
	Line contains a tab character.	149
	Line contains a tab character.	151
	Line contains a tab character.	152
	Line contains a tab character.	153
	Line has trailing spaces.	154
	Line contains a tab character.	154
	Line contains a tab character.	155
	Line contains a tab character.	156
	Line contains a tab character.	157
	Method 'setMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	157
	Parameter maxEpochs should be final.	157
	'maxEpochs' hides a field.	157
	Line contains a tab character.	158
	Line contains a tab character.	159
	Line contains a tab character.	161
	Line contains a tab character.	162
	Line has trailing spaces.	163
	Line contains a tab character.	163
	Line contains a tab character.	164
	Line contains a tab character.	165
	Line contains a tab character.	166
	Method 'getPredictionError' is not designed for extension - needs to be abstract, final or empty.	166
	Line contains a tab character.	167
	Line contains a tab character.	168
	Line contains a tab character.	170
	Line contains a tab character.	171
	Line contains a tab character.	172
	Line has trailing spaces.	173
	Line contains a tab character.	173
	Line contains a tab character.	174
	Line contains a tab character.	175
	Line contains a tab character.	176
	Method 'setPredictionError' is not designed for extension - needs to be abstract, final or empty.	176
	Parameter predictionError should be final.	176
	'predictionError' hides a field.	176
	Line contains a tab character.	177
	Line contains a tab character.	178
	Method 'getBindedNetworkClass' is not designed for extension - needs to be abstract, final or empty.	185
	Line contains a tab character.	189
	Line contains a tab character.	190
	Line has trailing spaces.	191
	Line contains a tab character.	191
	Line contains a tab character.	192
	Line contains a tab character.	193
	Line contains a tab character.	194
	Method 'getMomentumRate' is not designed for extension - needs to be abstract, final or empty.	194
	Line contains a tab character.	195
	Line contains a tab character.	196
	Line contains a tab character.	198
	Line contains a tab character.	199
	Line contains a tab character.	200
	Line has trailing spaces.	201
	Line contains a tab character.	201
	Line contains a tab character.	202
	Line contains a tab character.	203
	Line contains a tab character.	204
	Method 'setMomentumRate' is not designed for extension - needs to be abstract, final or empty.	204
	Parameter momentumRate should be final.	204
	'momentumRate' hides a field.	204
	Line contains a tab character.	205
	Line contains a tab character.	206
	Line contains a tab character.	208
	Line contains a tab character.	209
	Line contains a tab character.	210
	Line contains a tab character.	211
	Method 'createSampleInstance' is not designed for extension - needs to be abstract, final or empty.	211
	Missing a Javadoc comment.	211
	Line is longer than 80 characters.	212
	Line contains a tab character.	212
	'500' is a magic number.	214
	'0.2' is a magic number.	215
	'0.01' is a magic number.	216
	'0.05' is a magic number.	217
	'20' is a magic number.	221
	'8' is a magic number.	225
	Line contains a tab character.	234

yawn/nn/mlp/PerceptronNode.java

Error		Line
	File does not end with a newline.	0

yawn/nn/mlp/PerceptronNode.java

Error		Line
	Line has trailing spaces.	1
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	12
	Line has trailing spaces.	14
	Line contains a tab character.	20
	Line has trailing spaces.	21
	Line contains a tab character.	21
	Line contains a tab character.	22
	Line contains a tab character.	23
	Line contains a tab character.	24
	Line contains a tab character.	25
	Variable 'weights' must be private and have accessor methods.	25
	Line contains a tab character.	27
	Line has trailing spaces.	28
	Line contains a tab character.	28
	Line contains a tab character.	29
	Line contains a tab character.	30
	Line contains a tab character.	31
	Line contains a tab character.	32
	Variable 'momentum' must be private and have accessor methods.	32
	Line contains a tab character.	34
	Line has trailing spaces.	35
	Line contains a tab character.	35
	Line has trailing spaces.	36
	Line contains a tab character.	36
	Line contains a tab character.	37
	Line contains a tab character.	38
	Variable 'minWeightValue' must be private and have accessor methods.	38
	'-0.04' is a magic number.	38
	Line contains a tab character.	40
	Line has trailing spaces.	41
	Line contains a tab character.	41
	Line has trailing spaces.	42
	Line contains a tab character.	42
	Line contains a tab character.	43
	Line contains a tab character.	44
	Variable 'maxWeightValue' must be private and have accessor methods.	44
	'0.04' is a magic number.	44
	Parameter inputSize should be final.	50
	Expected @param tag for 'inputSize'.	50
	Missing a Javadoc comment.	56
	Missing a Javadoc comment.	60
	Method 'setInputSize' is not designed for extension - needs to be abstract, final or empty.	64
	Missing a Javadoc comment.	64
	Parameter inputSize should be final.	64
	Line has trailing spaces.	72
	Method 'activationFunction' is not designed for extension - needs to be abstract, final or empty.	75
	Missing a Javadoc comment.	75
	Parameter input should be final.	75
	Line contains a tab character.	80
	Line contains a tab character.	81
	Line has trailing spaces.	82
	Line contains a tab character.	82
	Line contains a tab character.	83
	Line contains a tab character.	84
	Line contains a tab character.	85
	Method 'getWeights' is not designed for extension - needs to be abstract, final or empty.	85
	Line contains a tab character.	86
	Line contains a tab character.	87
	Line contains a tab character.	89
	Line contains a tab character.	90
	Line has trailing spaces.	91
	Line contains a tab character.	91
	Line contains a tab character.	92
	Line contains a tab character.	93
	Line contains a tab character.	94
	Method 'setWeights' is not designed for extension - needs to be abstract, final or empty.	94
	Parameter weights should be final.	94
	'weights' hides a field.	94
	Expected @param tag for 'weights'.	94
	Line contains a tab character.	95
	Line contains a tab character.	96
	Missing a Javadoc comment.	99
	Parameter x should be final.	99
	Missing a Javadoc comment.	101
	Parameter x should be final.	101
	Line has trailing spaces.	105
	Method 'adapt' is not designed for extension - needs to be abstract, final or empty.	109
	Parameter delta should be final.	109
	Expected @param tag for 'delta'.	109
	Parameter learningRate should be final.	109
	Expected @param tag for 'learningRate'.	109
	Parameter momentumRate should be final.	109
	Expected @param tag for 'momentumRate'.	109
	Method 'calculateOutputLayerDelta' is not designed for extension - needs to be abstract, final or empty.	124
	Missing a Javadoc comment.	124
	Parameter expected should be final.	124
	Line has trailing spaces.	131
	Line is longer than 80 characters.	138
	Method 'calculateHiddenLayerDelta' is not designed for extension - needs to be abstract, final or empty.	138
	Parameter nextLayerDeltas should be final.	138
	Parameter nextLayerWeights should be final.	138
	Line is longer than 80 characters.	139
	Line contains a tab character.	142
	Line contains a tab character.	143
	Line has trailing spaces.	144
	Line contains a tab character.	144
	Line contains a tab character.	145
	Line contains a tab character.	146
	Line contains a tab character.	147
	Method 'getMaxWeightValue' is not designed for extension - needs to be abstract, final or empty.	147
	Line contains a tab character.	148
	Line contains a tab character.	149
	Line contains a tab character.	151
	Line contains a tab character.	152
	Line contains a tab character.	153
	Line has trailing spaces.	154
	Line contains a tab character.	154
	Line contains a tab character.	155
	Line contains a tab character.	156
	Line contains a tab character.	157
	Method 'setMaxWeightValue' is not designed for extension - needs to be abstract, final or empty.	157
	Parameter maxWeightValue should be final.	157
	'maxWeightValue' hides a field.	157
	Line contains a tab character.	158
	Line contains a tab character.	159
	Line contains a tab character.	161
	Line contains a tab character.	162
	Line has trailing spaces.	163
	Line contains a tab character.	163
	Line contains a tab character.	164
	Line contains a tab character.	165
	Line contains a tab character.	166
	Method 'getMinWeightValue' is not designed for extension - needs to be abstract, final or empty.	166
	Line contains a tab character.	167
	Line contains a tab character.	168
	Line contains a tab character.	170
	Line contains a tab character.	171
	Line contains a tab character.	172
	Line has trailing spaces.	173
	Line contains a tab character.	173
	Line contains a tab character.	174
	Line contains a tab character.	175
	Line contains a tab character.	176
	Method 'setMinWeightValue' is not designed for extension - needs to be abstract, final or empty.	176
	Parameter minWeightValue should be final.	176
	'minWeightValue' hides a field.	176
	Line contains a tab character.	177
	Line contains a tab character.	178

yawn/nn/mlp/SigmoidNode.java

Error		Line
	File does not end with a newline.	0

yawn/nn/mlp/SigmoidNode.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	6
	Line has trailing spaces.	7
	Line has trailing spaces.	9
	Parameter inputSize should be final.	18
	Expected @param tag for 'inputSize'.	18
	Missing a Javadoc comment.	22
	Method 'df' is not designed for extension - needs to be abstract, final or empty.	26
	Missing a Javadoc comment.	26
	Parameter x should be final.	26
	Method 'f' is not designed for extension - needs to be abstract, final or empty.	30
	Missing a Javadoc comment.	30
	Parameter x should be final.	30

yawn/nn/mlp/package.html

Error		Line
	Missing package documentation file.	0

yawn/nn/mlp/smart/SmartMultiLayerPerceptron.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	15
	Line is longer than 80 characters.	16
	Line has trailing spaces.	17
	Line has trailing spaces.	24
	Missing a Javadoc comment.	28
	Variable 'currentEpoch' must be private and have accessor methods.	28
	Missing a Javadoc comment.	30
	Variable 'maxLearningRate' must be private and have accessor methods.	30
	Missing a Javadoc comment.	32
	Variable 'maxEpochs' must be private and have accessor methods.	32
	Missing a Javadoc comment.	34
	Variable 'predictionError' must be private and have accessor methods.	34
	Line contains a tab character.	36
	Line has trailing spaces.	37
	Line contains a tab character.	37
	Line contains a tab character.	38
	Line contains a tab character.	39
	Line contains a tab character.	40
	Line contains a tab character.	41
	Variable 'net' must be private and have accessor methods.	41
	Line has trailing spaces.	44
	Line has trailing spaces.	53
	Missing a Javadoc comment.	57
	Parameter input should be final.	57
	Parameter output should be final.	57
	Line has trailing spaces.	63
	Method 'predict' is not designed for extension - needs to be abstract, final or empty.	66
	Missing a Javadoc comment.	66
	Parameter input should be final.	66
	Line has trailing spaces.	73
	Missing a Javadoc comment.	76
	Parameter iop should be final.	76
	Line has trailing spaces.	83
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	86
	Missing a Javadoc comment.	86
	Line has trailing spaces.	93
	Method 'getOutputSize' is not designed for extension - needs to be abstract, final or empty.	96
	Missing a Javadoc comment.	96
	Line has trailing spaces.	102
	Line is longer than 80 characters.	105
	Missing a Javadoc comment.	105
	Parameter config should be final.	105
	Line has trailing spaces.	112
	Method 'yieldConfiguration' is not designed for extension - needs to be abstract, final or empty.	115
	Missing a Javadoc comment.	115
	Line has trailing spaces.	122
	Method 'getNeuralNetworkName' is not designed for extension - needs to be abstract, final or empty.	125
	Missing a Javadoc comment.	125

yawn/nn/mlp/smart/SmartMultiLayerPerceptronConfig.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	18
	Line is longer than 80 characters.	19
	Line has trailing spaces.	20
	Line has trailing spaces.	27
	Method 'getBindedNetworkClass' is not designed for extension - needs to be abstract, final or empty.	36
	Line contains a tab character.	40
	Line has trailing spaces.	41
	Line contains a tab character.	41
	Line contains a tab character.	42
	Line contains a tab character.	43
	Variable 'layerConfigs' must be private and have accessor methods.	43
	Line contains a tab character.	45
	Line has trailing spaces.	46
	Line contains a tab character.	46
	Line has trailing spaces.	47
	Line contains a tab character.	47
	Line contains a tab character.	48
	Line contains a tab character.	49
	Variable 'learningRate' must be private and have accessor methods.	49
	Line contains a tab character.	51
	Line has trailing spaces.	52
	Line contains a tab character.	52
	Line has trailing spaces.	53
	Line contains a tab character.	53
	Line contains a tab character.	54
	Line contains a tab character.	55
	Variable 'momentumRate' must be private and have accessor methods.	55
	Line contains a tab character.	57
	Line has trailing spaces.	58
	Line contains a tab character.	58
	Line has trailing spaces.	59
	Line contains a tab character.	59
	Line contains a tab character.	60
	Line contains a tab character.	61
	Variable 'maxEpochs' must be private and have accessor methods.	61
	Line contains a tab character.	63
	Line has trailing spaces.	64
	Line contains a tab character.	64
	Line has trailing spaces.	65
	Line contains a tab character.	65
	Line contains a tab character.	66
	Line contains a tab character.	67
	Variable 'predictionError' must be private and have accessor methods.	67
	Method 'addHiddenLayerConfig' is not designed for extension - needs to be abstract, final or empty.	70
	Missing a Javadoc comment.	70
	Parameter le should be final.	70
	Line contains a tab character.	74
	Line contains a tab character.	75
	Line has trailing spaces.	76
	Line contains a tab character.	76
	Line contains a tab character.	77
	Line contains a tab character.	78
	Line contains a tab character.	79
	Method 'getLayerConfigs' is not designed for extension - needs to be abstract, final or empty.	79
	Line contains a tab character.	80
	Line contains a tab character.	81
	Line contains a tab character.	83
	Line contains a tab character.	84
	Line contains a tab character.	85
	Line has trailing spaces.	86
	Line contains a tab character.	86
	Line contains a tab character.	87
	Line contains a tab character.	88
	Line contains a tab character.	89
	Method 'setLayerConfigs' is not designed for extension - needs to be abstract, final or empty.	89
	Parameter layers should be final.	89
	Line contains a tab character.	90
	Line contains a tab character.	91
	Method 'internalValidate' is not designed for extension - needs to be abstract, final or empty.	97
	Line is longer than 80 characters.	103
	Line is longer than 80 characters.	107
	Line is longer than 80 characters.	111
	Line contains a tab character.	137
	Line contains a tab character.	138
	Line has trailing spaces.	139
	Line contains a tab character.	139
	Line contains a tab character.	140
	Line contains a tab character.	141
	Line contains a tab character.	142
	Method 'getLearningRate' is not designed for extension - needs to be abstract, final or empty.	142
	Line contains a tab character.	143
	Line contains a tab character.	144
	Line contains a tab character.	146
	Line contains a tab character.	147
	Line contains a tab character.	148
	Line has trailing spaces.	149
	Line contains a tab character.	149
	Line contains a tab character.	150
	Line contains a tab character.	151
	Line contains a tab character.	152
	Method 'setLearningRate' is not designed for extension - needs to be abstract, final or empty.	152
	Parameter learningRate should be final.	152
	'learningRate' hides a field.	152
	Line contains a tab character.	153
	Line contains a tab character.	154
	Line contains a tab character.	156
	Line contains a tab character.	157
	Line has trailing spaces.	158
	Line contains a tab character.	158
	Line contains a tab character.	159
	Line contains a tab character.	160
	Line contains a tab character.	161
	Method 'getMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	161
	Line contains a tab character.	162
	Line contains a tab character.	163
	Line contains a tab character.	165
	Line contains a tab character.	166
	Line contains a tab character.	167
	Line has trailing spaces.	168
	Line contains a tab character.	168
	Line contains a tab character.	169
	Line contains a tab character.	170
	Line contains a tab character.	171
	Method 'setMaxEpochs' is not designed for extension - needs to be abstract, final or empty.	171
	Parameter maxEpochs should be final.	171
	'maxEpochs' hides a field.	171
	Line contains a tab character.	172
	Line contains a tab character.	173
	Line contains a tab character.	175
	Line contains a tab character.	176
	Line has trailing spaces.	177
	Line contains a tab character.	177
	Line contains a tab character.	178
	Line contains a tab character.	179
	Line contains a tab character.	180
	Method 'getPredictionError' is not designed for extension - needs to be abstract, final or empty.	180
	Line contains a tab character.	181
	Line contains a tab character.	182
	Line contains a tab character.	184
	Line contains a tab character.	185
	Line contains a tab character.	186
	Line has trailing spaces.	187
	Line contains a tab character.	187
	Line contains a tab character.	188
	Line contains a tab character.	189
	Line contains a tab character.	190
	Method 'setPredictionError' is not designed for extension - needs to be abstract, final or empty.	190
	Parameter predictionError should be final.	190
	'predictionError' hides a field.	190
	Line contains a tab character.	191
	Line contains a tab character.	192
	Line contains a tab character.	194
	Line contains a tab character.	195
	Line has trailing spaces.	196
	Line contains a tab character.	196
	Line contains a tab character.	197
	Line contains a tab character.	198
	Line contains a tab character.	199
	Method 'getMomentumRate' is not designed for extension - needs to be abstract, final or empty.	199
	Line contains a tab character.	200
	Line contains a tab character.	201
	Line contains a tab character.	203
	Line contains a tab character.	204
	Line contains a tab character.	205
	Line has trailing spaces.	206
	Line contains a tab character.	206
	Line contains a tab character.	207
	Line contains a tab character.	208
	Line contains a tab character.	209
	Method 'setMomentumRate' is not designed for extension - needs to be abstract, final or empty.	209
	Parameter momentumRate should be final.	209
	'momentumRate' hides a field.	209
	Line contains a tab character.	210
	Line contains a tab character.	211
	Line contains a tab character.	213
	Line contains a tab character.	214
	Line contains a tab character.	215
	Line contains a tab character.	216
	Method 'createSampleInstance' is not designed for extension - needs to be abstract, final or empty.	216
	Missing a Javadoc comment.	216
	Line contains a tab character.	217
	Line contains a tab character.	218
	Line contains a tab character.	219

yawn/nn/mlp/smart/package.html

Error		Line
	Missing package documentation file.	0

yawn/nn/package.html

Error		Line
	Missing package documentation file.	0

yawn/optim/OptimizableModel.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	2
	First sentence should end with a period.	6
	Line has trailing spaces.	7
	Line has trailing spaces.	8
	Line has trailing spaces.	10
	Line contains a tab character.	17
	Line has trailing spaces.	18
	Line contains a tab character.	18
	Line contains a tab character.	19
	Expected an @return tag.	20
	Line contains a tab character.	20
	Redundant 'public' modifier.	20

yawn/optim/OptimizationAdapter.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	2
	Line has trailing spaces.	8
	Line is longer than 80 characters.	9
	Line has trailing spaces.	10

yawn/optim/ParamerFitter.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	2
	Line has trailing spaces.	10
	Line has trailing spaces.	12
	Line has trailing spaces.	19

yawn/optim/genetic/GeneticParameterFitter.java

Error		Line
	Line does not match expected header line of ' GNU GENERAL PUBLIC LICENSE'.	1
	Line has trailing spaces.	2
	Line has trailing spaces.	38
	Line is longer than 80 characters.	39
	Line has trailing spaces.	40
	Line contains a tab character.	46
	Missing a Javadoc comment.	46
	Name 'log' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	46
	Line contains a tab character.	47
	Line contains a tab character.	49
	Line has trailing spaces.	50
	Line contains a tab character.	50
	Line contains a tab character.	51
	Line contains a tab character.	52
	Line contains a tab character.	54
	Line has trailing spaces.	55
	Line contains a tab character.	55
	Line contains a tab character.	56
	Line contains a tab character.	57
	Line contains a tab character.	58
	Line contains a tab character.	59
	Variable 'fittedModel' must be private and have accessor methods.	59
	Line contains a tab character.	61
	Line has trailing spaces.	62
	Line contains a tab character.	62
	Line contains a tab character.	63
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line contains a tab character.	66
	Variable 'modeltoBeFittedConfig' must be private and have accessor methods.	66
	Line contains a tab character.	68
	Line has trailing spaces.	69
	Line contains a tab character.	69
	Line has trailing spaces.	70
	Line contains a tab character.	70
	Line contains a tab character.	71
	Line contains a tab character.	72
	Variable 'maxGenerations' must be private and have accessor methods.	72
	Line contains a tab character.	74
	Line has trailing spaces.	75
	Line contains a tab character.	75
	Line has trailing spaces.	76
	Line contains a tab character.	76
	Line contains a tab character.	77
	Line contains a tab character.	78
	Variable 'populationSize' must be private and have accessor methods.	78
	Line contains a tab character.	80
	Line has trailing spaces.	81
	Line contains a tab character.	81
	Line has trailing spaces.	82
	Line contains a tab character.	82
	Line contains a tab character.	83
	Line contains a tab character.	84
	Variable 'preserveFittestIndividual' must be private and have accessor methods.	84
	Line contains a tab character.	87
	Line has trailing spaces.	88
	Line contains a tab character.	88
	Line contains a tab character.	89
	Line contains a tab character.	90
	Line contains a tab character.	91
	Line contains a tab character.	92
	Line contains a tab character.	94
	Line contains a tab character.	95
	Line has trailing spaces.	96
	Line contains a tab character.	96
	Line contains a tab character.	97
	Line contains a tab character.	98
	Line contains a tab character.	99
	Method 'getFittedModel' is not designed for extension - needs to be abstract, final or empty.	99
	Line contains a tab character.	100
	Line contains a tab character.	101
	Line contains a tab character.	103
	Line contains a tab character.	104
	Line has trailing spaces.	105
	Line contains a tab character.	105
	Line contains a tab character.	106
	Line contains a tab character.	107
	Line contains a tab character.	108
	Method 'getModeltoBeFittedConfig' is not designed for extension - needs to be abstract, final or empty.	108
	Line contains a tab character.	109
	Line contains a tab character.	110
	Line contains a tab character.	113
	Line contains a tab character.	114
	Line has trailing spaces.	115
	Line contains a tab character.	115
	Line contains a tab character.	116
	Line contains a tab character.	117
	Line contains a tab character.	118
	Method 'getInputSize' is not designed for extension - needs to be abstract, final or empty.	118
	Missing a Javadoc comment.	118
	Line contains a tab character.	119
	Line contains a tab character.	120
	Line contains a tab character.	122
	Line contains a tab character.	123
	Line has trailing spaces.	124
	Line contains a tab character.	124
	Line contains a tab character.	125
	Line contains a tab character.	126
	Line contains a tab character.	127
	Method 'getMaxGenerations' is not designed for extension - needs to be abstract, final or empty.	127
	Line contains a tab character.	128
	Line contains a tab character.	129
	Line contains a tab character.	132
	Line contains a tab character.	133
	Line has trailing spaces.	134
	Line contains a tab character.	134
	Line contains a tab character.	135
	Line contains a tab character.	136
	Line contains a tab character.	137
	Method 'getNeuralNetworkName' is not designed for extension - needs to be abstract, final or empty.	137
	Missing a Javadoc comment.	137
	Line contains a tab character.	138
	Line contains a tab character.	139
	Line contains a tab character.	140
	Line contains a tab character.	142
	Line contains a tab character.	143
	Line has trailing spaces.	144
	Line contains a tab character.	144
	Line contains a tab character.	145
	Line contains a tab character.	146
	Line contains a tab character.	147
	Method 'getOutputSize' is not designed for extension - needs to be abstract, final or empty.	147
	Missing a Javadoc comment.	147
	Line contains a tab character.	148
	Line contains a tab character.	149
	Line contains a tab character.	151
	Line contains a tab character.	152
	Line has trailing spaces.	153
	Line contains a tab character.	153
	Line contains a tab character.	154
	Line contains a tab character.	155
	Line contains a tab character.	156
	Method 'getPopulationSize' is not designed for extension - needs to be abstract, final or empty.	156
	Line contains a tab character.	157
	Line contains a tab character.	158
	Line contains a tab character.	160
	Line contains a tab character.	161
	Line has trailing spaces.	162
	Line contains a tab character.	162
	Line contains a tab character.	163
	Line contains a tab character.	164
	Line contains a tab character.	165
	Method 'isPreserveFittestIndividual' is not designed for extension - needs to be abstract, final or empty.	165
	Line contains a tab character.	166
	Line contains a tab character.	167
	Line contains a tab character.	170
	Line contains a tab character.	171
	Line has trailing spaces.	172
	Line contains a tab character.	172
	Line contains a tab character.	173
	Line contains a tab character.	174
	Line contains a tab character.	175
	Line contains a tab character.	176
	Missing a Javadoc comment.	176
	Parameter input should be final.	176
	Parameter output should be final.	176
	Line contains a tab character.	177
	Line contains a tab character.	179
	Line contains a tab character.	181
	Line contains a tab character.	182
	Line has trailing spaces.	183
	Line contains a tab character.	183
	Line contains a tab character.	184
	Line contains a tab character.	185
	Line contains a tab character.	186
	Method 'predict' is not designed for extension - needs to be abstract, final or empty.	186
	Missing a Javadoc comment.	186
	Parameter input should be final.	186
	Line contains a tab character.	187
	Line contains a tab character.	188
	Line contains a tab character.	190
	Line contains a tab character.	191
	Line contains a tab character.	192
	Line has trailing spaces.	193
	Line contains a tab character.	193
	Line contains a tab character.	194
	Line contains a tab character.	195
	Line contains a tab character.	196
	Method 'setFittedModel' is not designed for extension - needs to be abstract, final or empty.	196
	Parameter fittedModel should be final.	196
	'fittedModel' hides a field.	196
	Line contains a tab character.	197
	Line contains a tab character.	198
	Line contains a tab character.	200
	Line contains a tab character.	201
	Line contains a tab character.	202
	Line has trailing spaces.	203
	Line contains a tab character.	203
	Line contains a tab character.	204
	Line contains a tab character.	205
	Line is longer than 80 characters.	206
	Line contains a tab character.	206
	Method 'setModeltoBeFittedConfig' is not designed for extension - needs to be abstract, final or empty.	206
	Parameter initialModelConfig should be final.	206
	Line contains a tab character.	207
	Line contains a tab character.	208
	Line contains a tab character.	210
	Line contains a tab character.	211
	Line contains a tab character.	212
	Line has trailing spaces.	213
	Line contains a tab character.	213
	Line contains a tab character.	214
	Line contains a tab character.	215
	Line contains a tab character.	216
	Method 'setMaxGenerations' is not designed for extension - needs to be abstract, final or empty.	216
	Parameter maxGenerations should be final.	216
	'maxGenerations' hides a field.	216
	Line contains a tab character.	217
	Line contains a tab character.	218
	Line contains a tab character.	220
	Line contains a tab character.	221
	Line contains a tab character.	222
	Line has trailing spaces.	223
	Line contains a tab character.	223
	Line contains a tab character.	224
	Line contains a tab character.	225
	Line contains a tab character.	226
	Method 'setPopulationSize' is not designed for extension - needs to be abstract, final or empty.	226
	Parameter populationSize should be final.	226
	'populationSize' hides a field.	226
	Line contains a tab character.	227
	Line contains a tab character.	228
	Line contains a tab character.	230
	Line contains a tab character.	231
	Line contains a tab character.	232
	Line has trailing spaces.	233
	Line contains a tab character.	233
	Line contains a tab character.	234
	Line contains a tab character.	235
	Line is longer than 80 characters.	236
	Line contains a tab character.	236
	Method 'setPreserveFittestIndividual' is not designed for extension - needs to be abstract, final or empty.	236
	Parameter preserveFittestIndividual should be final.	236
	'preserveFittestIndividual' hides a field.	236
	Line contains a tab character.	237
	Line contains a tab character.	238
	Line contains a tab character.	240
	Line contains a tab character.	241
	Line has trailing spaces.	242
	Line contains a tab character.	242
	Line contains a tab character.	243
	Line contains a tab character.	244
	Line is longer than 80 characters.	245
	Line contains a tab character.	245
	Method 'setup' is not designed for extension - needs to be abstract, final or empty.	245
	Missing a Javadoc comment.	245
	Parameter config should be final.	245
	Line contains a tab character.	246
	Line contains a tab character.	247
	Line contains a tab character.	248
	Line contains a tab character.	249
	Line contains a tab character.	250
	Line contains a tab character.	251
	Line contains a tab character.	252
	Line contains a tab character.	254
	Line contains a tab character.	255
	Line contains a tab character.	257
	Line contains a tab character.	258
	Line is longer than 80 characters.	259
	Line contains a tab character.	259
	Line contains a tab character.	260
	Line contains a tab character.	261
	Line contains a tab character.	263
	Line contains a tab character.	264
	Line has trailing spaces.	265
	Line contains a tab character.	265
	Line contains a tab character.	266
	Line contains a tab character.	267
	Line contains a tab character.	268
	Method 'train' is not designed for extension - needs to be abstract, final or empty.	268
	Missing a Javadoc comment.	268
	Parameter iop should be final.	268
	Line contains a tab character.	270
	Line contains a tab character.	272
	Line contains a tab character.	273
	Line contains a tab character.	275
	Line contains a tab character.	277
	Line is longer than 80 characters.	278
	Line contains a tab character.	278
	Line contains a tab character.	279
	Line is longer than 80 characters.	281
	Line contains a tab character.	281
	Line contains a tab character.	282
	Line contains a tab character.	284
	'0.8' is a magic number.	284
	Line is longer than 80 characters.	286
	Line contains a tab character.	286
	Line contains a tab character.	287
	Line contains a tab character.	288
	Line is longer than 80 characters.	289
	Line contains a tab character.	289
	Line contains a tab character.	291
	Line is longer than 80 characters.	292
	Line contains a tab character.	292
	Line contains a tab character.	294
	Line contains a tab character.	295
	Line contains a tab character.	297
	Line contains a tab character.	299
	Line contains a tab character.	300
	Line contains a tab character.	301
	Line contains a tab character.	302
	Line is longer than 80 characters.	303
	Line contains a tab character.	303
	Line contains a tab character.	304
	Line is longer than 80 characters.	306
	Line contains a tab character.	306
	Line contains a tab character.	307
	Line contains a tab character.	308
	Line contains a tab character.	309
	Line contains a tab character.	310
	Line contains a tab character.	311
	Line contains a tab character.	313
	Line contains a tab character.	314
	Line contains a tab character.	315
	Line contains a tab character.	316
	Line contains a tab character.	317
	Line contains a tab character.	319
	Line contains a tab character.	321
	Line contains a tab character.	322
	Line is longer than 80 characters.	323
	Line contains a tab character.	323
	'cast' is not followed by whitespace.	323
	'(' is followed by whitespace.	323
	'0.2' is a magic number.	323
	Line contains a tab character.	325
	Line contains a tab character.	326
	Line contains a tab character.	327
	Line contains a tab character.	329
	Line contains a tab character.	330
	Line contains a tab character.	331
	Line contains a tab character.	333
	Line contains a tab character.	334
	Line has trailing spaces.	335
	Line contains a tab character.	335
	Line contains a tab character.	336
	Line contains a tab character.	337
	Line contains a tab character.	338
	Method 'yieldConfiguration' is not designed for extension - needs to be abstract, final or empty.	338
	Missing a Javadoc comment.	338
	Line contains a tab character.	339
	Line contains a tab character.	340
	Line contains a tab character.	341
	Line contains a tab character.	342
	Line contains a tab character.	343
	Line contains a tab character.	344
	Line contains a tab character.	345
	Line contains a tab character.	346
	Line contains a tab character.	347
	Line contains a tab character.	348
	Line contains a tab character.	350
	Missing a Javadoc comment.	350
	Parameter adapter should be final.	350
	Line contains a tab character.	351
	Parameter population should be final.	351
	Parameter amount should be final.	351
	Line contains a tab character.	352
	Line contains a tab character.	354
	Line contains a tab character.	355
	Line contains a tab character.	356
	Line contains a tab character.	357
	Line contains a tab character.	358
	Line contains a tab character.	359
	Line contains a tab character.	360
	Line is longer than 80 characters.	361
	Line contains a tab character.	361
	Line contains a tab character.	363
	Line contains a tab character.	364
	Line contains a tab character.	365
	Line is longer than 80 characters.	366
	Line contains a tab character.	366
	Line contains a tab character.	367
	Line contains a tab character.	369
	Line contains a tab character.	370
	Line contains a tab character.	371
	Line contains a tab character.	373
	Line contains a tab character.	374
	Line contains a tab character.	376
	Line is longer than 80 characters.	377
	Line contains a tab character.	377
	Line is longer than 80 characters.	378
	Line contains a tab character.	378
	'cast' is not followed by whitespace.	378
	Line contains a tab character.	379
	Line contains a tab character.	381
	Line contains a tab character.	382
	Missing a Javadoc comment.	384
	Line contains a tab character.	384
	Line contains a tab character.	386
	Missing a Javadoc comment.	386
	Parameter arg0 should be final.	386
	Parameter arg1 should be final.	386
	Line is longer than 80 characters.	387
	Line contains a tab character.	387
	Line is longer than 80 characters.	388
	Line contains a tab character.	388
	Line contains a tab character.	389
	Line contains a tab character.	390
	Line contains a tab character.	391
	Line contains a tab character.	392
	Line contains a tab character.	393
	Line contains a tab character.	394
	Line contains a tab character.	395
	Line contains a tab character.	396
	Line contains a tab character.	398

yawn/optim/genetic/GeneticParameterFitterConfig.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	2
	Line has trailing spaces.	14
	Line is longer than 80 characters.	15
	Line has trailing spaces.	16
	Line contains a tab character.	22
	Line has trailing spaces.	23
	Line contains a tab character.	23
	Line has trailing spaces.	24
	Line contains a tab character.	24
	Line contains a tab character.	25
	Line contains a tab character.	26
	Variable 'maxGenerations' must be private and have accessor methods.	26
	Line contains a tab character.	28
	Line has trailing spaces.	29
	Line contains a tab character.	29
	Line contains a tab character.	30
	Line contains a tab character.	31
	Line contains a tab character.	32
	Line contains a tab character.	33
	Variable 'modeltoBeFittedConfig' must be private and have accessor methods.	33
	Line contains a tab character.	35
	Line has trailing spaces.	36
	Line contains a tab character.	36
	Line has trailing spaces.	37
	Line contains a tab character.	37
	Line contains a tab character.	38
	Line contains a tab character.	39
	Variable 'populationSize' must be private and have accessor methods.	39
	Line contains a tab character.	41
	Line has trailing spaces.	42
	Line contains a tab character.	42
	Line has trailing spaces.	43
	Line contains a tab character.	43
	Line contains a tab character.	44
	Line contains a tab character.	45
	Variable 'preserveFittestIndividual' must be private and have accessor methods.	45
	Line has trailing spaces.	49
	Method 'getBindedNetworkClass' is not designed for extension - needs to be abstract, final or empty.	58
	Line contains a tab character.	62
	Line contains a tab character.	63
	Line has trailing spaces.	64
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line contains a tab character.	66
	Line contains a tab character.	67
	Method 'getMaxGenerations' is not designed for extension - needs to be abstract, final or empty.	67
	Line contains a tab character.	68
	Line contains a tab character.	69
	Line contains a tab character.	71
	Line contains a tab character.	72
	Line has trailing spaces.	73
	Line contains a tab character.	73
	Line contains a tab character.	74
	Line contains a tab character.	75
	Line contains a tab character.	76
	Method 'getModeltoBeFittedConfig' is not designed for extension - needs to be abstract, final or empty.	76
	Line contains a tab character.	77
	Line contains a tab character.	78
	Line contains a tab character.	80
	Line contains a tab character.	81
	Line has trailing spaces.	82
	Line contains a tab character.	82
	Line contains a tab character.	83
	Line contains a tab character.	84
	Line contains a tab character.	85
	Method 'getPopulationSize' is not designed for extension - needs to be abstract, final or empty.	85
	Line contains a tab character.	86
	Line contains a tab character.	87
	Line contains a tab character.	89
	Line contains a tab character.	90
	Line has trailing spaces.	91
	Line contains a tab character.	91
	Line contains a tab character.	92
	Line contains a tab character.	93
	Line contains a tab character.	94
	Method 'getPreserveFittestIndividual' is not designed for extension - needs to be abstract, final or empty.	94
	Line contains a tab character.	95
	Line contains a tab character.	96
	Method 'isPreserveFittestIndividual' is not designed for extension - needs to be abstract, final or empty.	110
	Line contains a tab character.	114
	Line contains a tab character.	115
	Line contains a tab character.	116
	Line has trailing spaces.	117
	Line contains a tab character.	117
	Line contains a tab character.	118
	Line contains a tab character.	119
	Line contains a tab character.	120
	Method 'setMaxGenerations' is not designed for extension - needs to be abstract, final or empty.	120
	Parameter maxGenerations should be final.	120
	'maxGenerations' hides a field.	120
	Line contains a tab character.	121
	Line contains a tab character.	122
	Line contains a tab character.	124
	Line contains a tab character.	125
	Line contains a tab character.	126
	Line has trailing spaces.	127
	Line contains a tab character.	127
	Line contains a tab character.	128
	Line contains a tab character.	129
	Line is longer than 80 characters.	130
	Line contains a tab character.	130
	Method 'setModeltoBeFittedConfig' is not designed for extension - needs to be abstract, final or empty.	130
	Parameter fittedModelConfig should be final.	130
	Line contains a tab character.	131
	Line contains a tab character.	132
	Line contains a tab character.	134
	Line contains a tab character.	135
	Line contains a tab character.	136
	Line has trailing spaces.	137
	Line contains a tab character.	137
	Line contains a tab character.	138
	Line contains a tab character.	139
	Line contains a tab character.	140
	Method 'setPopulationSize' is not designed for extension - needs to be abstract, final or empty.	140
	Parameter populationSize should be final.	140
	'populationSize' hides a field.	140
	Line contains a tab character.	141
	Line contains a tab character.	142
	Line contains a tab character.	144
	Line contains a tab character.	145
	Line contains a tab character.	146
	Line has trailing spaces.	147
	Line contains a tab character.	147
	Line contains a tab character.	148
	Line contains a tab character.	149
	Line is longer than 80 characters.	150
	Line contains a tab character.	150
	Method 'setPreserveFittestIndividual' is not designed for extension - needs to be abstract, final or empty.	150
	Parameter preserveFittestIndividual should be final.	150
	'preserveFittestIndividual' hides a field.	150
	Line contains a tab character.	151
	Line contains a tab character.	152
	Line has trailing spaces.	156
	Line is longer than 80 characters.	157
	Method 'setEnvironment' is not designed for extension - needs to be abstract, final or empty.	159
	Missing a Javadoc comment.	159
	Parameter environment should be final.	159
	Line contains a tab character.	166
	Line contains a tab character.	167
	Line contains a tab character.	168
	Line contains a tab character.	169
	Method 'createSampleInstance' is not designed for extension - needs to be abstract, final or empty.	169
	Line is longer than 80 characters.	170
	'20' is a magic number.	171
	'10' is a magic number.	172
	Line has trailing spaces.	174
	'10' is a magic number.	178
	'0.00000001' is a magic number.	180
	'0.8' is a magic number.	181
	'0.95' is a magic number.	182
	'0.00000001' is a magic number.	184
	'0.8' is a magic number.	185
	'0.001' is a magic number.	189
	'0.0005' is a magic number.	190
	Line contains a tab character.	195

yawn/optim/genetic/JGapAdapter.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	2
	Line has trailing spaces.	18
	Line has trailing spaces.	20
	Line is longer than 80 characters.	25
	Missing a Javadoc comment.	27
	Name 'log' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	27
	Line contains a tab character.	29
	Line has trailing spaces.	30
	Line contains a tab character.	30
	Line contains a tab character.	31
	Line contains a tab character.	32
	Line contains a tab character.	33
	Line contains a tab character.	34
	Variable 'templateConfig' must be private and have accessor methods.	34
	Line has trailing spaces.	38
	Parameter config should be final.	40
	Expected @param tag for 'config'.	40
	First sentence should end with a period.	44
	Line contains a tab character.	44
	Line is longer than 80 characters.	45
	Line contains a tab character.	45
	Line contains a tab character.	46
	Line has trailing spaces.	47
	Line contains a tab character.	47
	Line contains a tab character.	48
	Line has trailing spaces.	49
	Line contains a tab character.	49
	Line contains a tab character.	50
	Line contains a tab character.	51
	Line contains a tab character.	52
	Line contains a tab character.	53
	Line is longer than 80 characters.	56
	Missing a Javadoc comment.	56
	Parameter chromosome should be final.	56
	Line contains a tab character.	58
	Line has trailing spaces.	59
	Line contains a tab character.	59
	Line contains a tab character.	60
	Line contains a tab character.	61
	Line contains a tab character.	62
	Line contains a tab character.	63
	Variable 'trainingSet' must be private and have accessor methods.	63
	Line contains a tab character.	65
	Line has trailing spaces.	66
	Line contains a tab character.	66
	Line contains a tab character.	67
	Line contains a tab character.	68
	Line contains a tab character.	69
	Line contains a tab character.	70
	Variable 'evalSet' must be private and have accessor methods.	70
	Line has trailing spaces.	75
	Method 'evaluate' is not designed for extension - needs to be abstract, final or empty.	78
	Missing a Javadoc comment.	78
	Parameter arg0 should be final.	78
	Line is longer than 80 characters.	81
	Line contains a tab character.	86
	Line contains a tab character.	87
	Line has trailing spaces.	88
	Line contains a tab character.	88
	Line contains a tab character.	89
	Line contains a tab character.	90
	Line contains a tab character.	91
	Method 'getTrainingSet' is not designed for extension - needs to be abstract, final or empty.	91
	Line contains a tab character.	92
	Line contains a tab character.	93
	Line contains a tab character.	95
	Line contains a tab character.	96
	Line contains a tab character.	97
	Line has trailing spaces.	98
	Line contains a tab character.	98
	Line contains a tab character.	99
	Line contains a tab character.	100
	Line contains a tab character.	101
	Method 'setTrainingSet' is not designed for extension - needs to be abstract, final or empty.	101
	Parameter trainingSet should be final.	101
	'trainingSet' hides a field.	101
	Line contains a tab character.	102
	Line contains a tab character.	103
	Line contains a tab character.	105
	Line contains a tab character.	106
	Line has trailing spaces.	107
	Line contains a tab character.	107
	Line contains a tab character.	108
	Line contains a tab character.	109
	Line contains a tab character.	110
	Method 'getTemplateConfig' is not designed for extension - needs to be abstract, final or empty.	110
	Line contains a tab character.	111
	Line contains a tab character.	112
	Line contains a tab character.	114
	Line contains a tab character.	115
	Line contains a tab character.	116
	Line has trailing spaces.	117
	Line contains a tab character.	117
	Line contains a tab character.	118
	Line contains a tab character.	119
	Line contains a tab character.	120
	Method 'setTemplateConfig' is not designed for extension - needs to be abstract, final or empty.	120
	Parameter templateConfig should be final.	120
	'templateConfig' hides a field.	120
	Line contains a tab character.	121
	Line contains a tab character.	122
	Line contains a tab character.	124
	Line contains a tab character.	125
	Line has trailing spaces.	126
	Line contains a tab character.	126
	Line contains a tab character.	127
	Line contains a tab character.	128
	Line contains a tab character.	129
	Method 'getEvalSet' is not designed for extension - needs to be abstract, final or empty.	129
	Line contains a tab character.	130
	Line contains a tab character.	131
	Line contains a tab character.	133
	Line contains a tab character.	134
	Line contains a tab character.	135
	Line has trailing spaces.	136
	Line contains a tab character.	136
	Line contains a tab character.	137
	Line contains a tab character.	138
	Line contains a tab character.	139
	Method 'setEvalSet' is not designed for extension - needs to be abstract, final or empty.	139
	Parameter evalSet should be final.	139
	'evalSet' hides a field.	139
	Line contains a tab character.	140
	Line contains a tab character.	141

yawn/optim/genetic/package.html

Error		Line
	Missing package documentation file.	0

yawn/optim/package.html

Error		Line
	Missing package documentation file.	0

yawn/package.html

Error		Line
	Missing package documentation file.	0

yawn/ui/cli/CommandLineHaltRequestedException.java

Error		Line
	File does not end with a newline.	0

yawn/ui/cli/CommandLineHaltRequestedException.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	8
	Line is longer than 80 characters.	9
	Line has trailing spaces.	10
	Line has trailing spaces.	17

yawn/ui/cli/CreateSampleExperiment.java

Error		Line
	Missing a header - not enough lines in file.	1
	Utility classes should not have a public or default constructor.	32
	Line contains a tab character.	34
	Missing a Javadoc comment.	34
	Name 'log' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	34
	Line contains a tab character.	35
	Line is longer than 80 characters.	37
	Line contains a tab character.	37
	Missing a Javadoc comment.	37
	Parameter usageMessage should be final.	37
	Parameter options should be final.	37
	Line contains a tab character.	38
	Line contains a tab character.	39
	Line contains a tab character.	40
	Line contains a tab character.	42
	Missing a Javadoc comment.	42
	Parameter error should be final.	42
	Line contains a tab character.	43
	Line contains a tab character.	44
	Line contains a tab character.	46
	Missing a Javadoc comment.	46
	Name 'EXPERIMENT_OPTION' must match pattern '^[a-z][a-zA-Z0-9]*$'.	46
	Line contains a tab character.	47
	Line contains a tab character.	49
	Missing a Javadoc comment.	49
	Name 'HELP_OPTION' must match pattern '^[a-z][a-zA-Z0-9]*$'.	49
	Line contains a tab character.	50
	Line is longer than 80 characters.	52
	Line contains a tab character.	52
	Missing a Javadoc comment.	52
	Name 'USAGE_MESG' must match pattern '^[a-z][a-zA-Z0-9]*$'.	52
	Line is longer than 80 characters.	54
	Line contains a tab character.	54
	Missing a Javadoc comment.	54
	Name 'MODEL_OPTION' must match pattern '^[a-z][a-zA-Z0-9]*$'.	54
	Line contains a tab character.	55
	Line has trailing spaces.	56
	Line contains a tab character.	56
	Line is longer than 80 characters.	57
	Line contains a tab character.	57
	Missing a Javadoc comment.	57
	Name 'ENVIRONMENT_OPTION' must match pattern '^[a-z][a-zA-Z0-9]*$'.	57
	Line contains a tab character.	58
	Line has trailing spaces.	59
	Line contains a tab character.	59
	Line contains a tab character.	60
	Missing a Javadoc comment.	60
	Name 'STORAGE_OPTION' must match pattern '^[a-z][a-zA-Z0-9]*$'.	60
	Line contains a tab character.	61
	Line is longer than 80 characters.	63
	Line contains a tab character.	63
	Missing a Javadoc comment.	63
	Name 'WELCOME_MESG' must match pattern '^[a-z][a-zA-Z0-9]*$'.	63
	Line is longer than 80 characters.	64
	Line contains a tab character.	64
	Line contains a tab character.	65
	Line contains a tab character.	67
	Missing a Javadoc comment.	67
	Parameter args should be final.	67
	Array brackets at illegal position.	67
	Line contains a tab character.	68
	Line contains a tab character.	69
	Line contains a tab character.	70
	Line has trailing spaces.	71
	Line contains a tab character.	71
	Line contains a tab character.	72
	'{' is not preceded with whitespace.	72
	Line is longer than 80 characters.	73
	Line contains a tab character.	73
	Line contains a tab character.	74
	Line contains a tab character.	75
	Line is longer than 80 characters.	76
	Line contains a tab character.	76
	Line is longer than 80 characters.	77
	Line contains a tab character.	77
	Line is longer than 80 characters.	78
	Line contains a tab character.	78
	Line is longer than 80 characters.	79
	Line contains a tab character.	79
	Line has trailing spaces.	80
	Line contains a tab character.	80
	Line contains a tab character.	81
	Line has trailing spaces.	82
	Line contains a tab character.	82
	Line is longer than 80 characters.	83
	Line contains a tab character.	83
	Line has trailing spaces.	84
	Line contains a tab character.	84
	Line is longer than 80 characters.	85
	Line contains a tab character.	85
	Line contains a tab character.	88
	',' is not followed by whitespace.	88
	Line contains a tab character.	89
	Line contains a tab character.	90
	Line contains a tab character.	91
	Line contains a tab character.	92
	Line contains a tab character.	93
	Line contains a tab character.	94
	Line contains a tab character.	95
	Line contains a tab character.	96
	Line contains a tab character.	97
	Line contains a tab character.	99
	Line contains a tab character.	101
	Missing a Javadoc comment.	101
	Parameter args should be final.	101
	Line contains a tab character.	102
	Line contains a tab character.	103
	Line contains a tab character.	104
	Line contains a tab character.	105
	Line contains a tab character.	107
	Line contains a tab character.	108
	Line contains a tab character.	109
	Line contains a tab character.	111
	Line contains a tab character.	112
	Line contains a tab character.	113
	Line has trailing spaces.	114
	Line contains a tab character.	114
	Line contains a tab character.	115
	Line contains a tab character.	116
	Line contains a tab character.	117
	Line has trailing spaces.	118
	Line contains a tab character.	118
	Line contains a tab character.	119
	Line contains a tab character.	120
	Line contains a tab character.	121
	Line contains a tab character.	122
	Line contains a tab character.	123
	Line contains a tab character.	125
	Line contains a tab character.	126
	Line contains a tab character.	127
	Line is longer than 80 characters.	128
	Line contains a tab character.	128
	Line contains a tab character.	129
	Line contains a tab character.	130
	Line contains a tab character.	131
	Line contains a tab character.	132
	Line contains a tab character.	134
	Line contains a tab character.	136
	Line contains a tab character.	137
	Line contains a tab character.	138
	Line contains a tab character.	139
	Line is longer than 80 characters.	140
	Line contains a tab character.	140
	Line contains a tab character.	141
	Line contains a tab character.	142
	Line contains a tab character.	143
	Line is longer than 80 characters.	144
	Line contains a tab character.	144
	Line contains a tab character.	145
	Line contains a tab character.	146
	Line contains a tab character.	147
	Line contains a tab character.	148
	Line contains a tab character.	149
	Line contains a tab character.	150
	Line contains a tab character.	151
	Line contains a tab character.	152

yawn/ui/cli/RunExperiment.java

Error		Line
	File does not end with a newline.	0

yawn/ui/cli/RunExperiment.java

Error		Line
	Line does not match expected header line of ' GNU GENERAL PUBLIC LICENSE'.	1
	Line has trailing spaces.	37
	Line has trailing spaces.	39
	Missing a Javadoc comment.	46
	Name 'log' must match pattern '^[A-Z][A-Z0-9](_[A-Z0-9]+)$'.	46
	Line is longer than 80 characters.	48
	Missing a Javadoc comment.	48
	Parameter usageMessage should be final.	48
	Parameter options should be final.	48
	Missing a Javadoc comment.	54
	Parameter error should be final.	54
	Line is longer than 80 characters.	58
	Missing a Javadoc comment.	58
	Name 'EXPERIMENT_OPTION' must match pattern '^[a-z][a-zA-Z0-9]*$'.	58
	Line is longer than 80 characters.	61
	Missing a Javadoc comment.	61
	Name 'HELP_OPTION' must match pattern '^[a-z][a-zA-Z0-9]*$'.	61
	Missing a Javadoc comment.	63
	Name 'QUIET_OPTION' must match pattern '^[a-z][a-zA-Z0-9]*$'.	63
	Missing a Javadoc comment.	66
	Name 'USAGE_MESG' must match pattern '^[a-z][a-zA-Z0-9]*$'.	66
	Line is longer than 80 characters.	68
	Missing a Javadoc comment.	68
	Name 'VERB_OPTION' must match pattern '^[a-z][a-zA-Z0-9]*$'.	68
	Line is longer than 80 characters.	70
	Missing a Javadoc comment.	70
	Name 'DEBUG_OPTION' must match pattern '^[a-z][a-zA-Z0-9]*$'.	70
	Line is longer than 80 characters.	72
	Missing a Javadoc comment.	72
	Name 'WELCOME_MESG' must match pattern '^[a-z][a-zA-Z0-9]*$'.	72
	Line is longer than 80 characters.	73
	Line contains a tab character.	76
	Line has trailing spaces.	77
	Line contains a tab character.	77
	Line contains a tab character.	78
	Line contains a tab character.	79
	Variable 'experimentFileName' must be private and have accessor methods.	79
	Line contains a tab character.	81
	Line has trailing spaces.	82
	Line contains a tab character.	82
	Line contains a tab character.	83
	Line contains a tab character.	84
	Variable 'verbose' must be private and have accessor methods.	84
	Line contains a tab character.	86
	Line has trailing spaces.	87
	Line contains a tab character.	87
	Line contains a tab character.	88
	Line contains a tab character.	89
	Variable 'debug' must be private and have accessor methods.	89
	Line contains a tab character.	91
	Line contains a tab character.	92
	Line contains a tab character.	93
	Line contains a tab character.	94
	Method 'isDebug' is not designed for extension - needs to be abstract, final or empty.	94
	Line contains a tab character.	95
	Line contains a tab character.	96
	Line contains a tab character.	98
	Line contains a tab character.	99
	Line contains a tab character.	100
	Line contains a tab character.	101
	Line contains a tab character.	102
	Method 'setDebug' is not designed for extension - needs to be abstract, final or empty.	102
	Parameter debug should be final.	102
	'debug' hides a field.	102
	Line contains a tab character.	103
	Line contains a tab character.	104
	Line contains a tab character.	106
	Line has trailing spaces.	107
	Line contains a tab character.	107
	Line has trailing spaces.	108
	Line contains a tab character.	108
	Line contains a tab character.	109
	Line contains a tab character.	110
	Variable 'welcomeMsgEnabled' must be private and have accessor methods.	110
	Missing a Javadoc comment.	113
	Parameter args should be final.	113
	Array brackets at illegal position.	113
	Missing a Javadoc comment.	126
	Parameter args should be final.	126
	Line is longer than 80 characters.	153
	Line is longer than 80 characters.	157
	Line has trailing spaces.	167
	Line contains a tab character.	173
	Line contains a tab character.	174
	Line has trailing spaces.	175
	Line contains a tab character.	175
	Line contains a tab character.	176
	Line contains a tab character.	177
	Line contains a tab character.	178
	Method 'getExperimentFileName' is not designed for extension - needs to be abstract, final or empty.	178
	Line contains a tab character.	179
	Line contains a tab character.	180
	Line contains a tab character.	182
	Line contains a tab character.	183
	Line has trailing spaces.	184
	Line contains a tab character.	184
	Line contains a tab character.	185
	Line contains a tab character.	186
	Line contains a tab character.	187
	Method 'isVerbose' is not designed for extension - needs to be abstract, final or empty.	187
	Line contains a tab character.	188
	Line contains a tab character.	189
	Line contains a tab character.	191
	Line contains a tab character.	192
	Line has trailing spaces.	193
	Line contains a tab character.	193
	Line contains a tab character.	194
	Line contains a tab character.	195
	Line contains a tab character.	196
	Method 'isWelcomeMsgEnabled' is not designed for extension - needs to be abstract, final or empty.	196
	Line contains a tab character.	197
	Line contains a tab character.	198
	Line has trailing spaces.	202
	Method 'run' is not designed for extension - needs to be abstract, final or empty.	205
	Line is longer than 80 characters.	224
	Line is longer than 80 characters.	239
	Line is longer than 80 characters.	243
	Line is longer than 80 characters.	246
	Line is longer than 80 characters.	248
	Line is longer than 80 characters.	253
	'10' is a magic number.	256
	Line is longer than 80 characters.	259
	Line is longer than 80 characters.	268
	Line is longer than 80 characters.	269
	Line is longer than 80 characters.	272
	Line is longer than 80 characters.	276
	Line is longer than 80 characters.	279
	Line contains a tab character.	307
	Line is longer than 80 characters.	309
	Line is longer than 80 characters.	320
	Line contains a tab character.	331
	Line contains a tab character.	332
	Line contains a tab character.	333
	Line contains a tab character.	334
	Line contains a tab character.	335
	Method 'setExperimentFileName' is not designed for extension - needs to be abstract, final or empty.	335
	Parameter experimentFileName should be final.	335
	'experimentFileName' hides a field.	335
	Line contains a tab character.	336
	Line contains a tab character.	337
	Missing a Javadoc comment.	340
	Parameter cl should be final.	340
	Line contains a tab character.	347
	Line contains a tab character.	348
	Line contains a tab character.	349
	Line contains a tab character.	350
	Line contains a tab character.	351
	Method 'setVerbose' is not designed for extension - needs to be abstract, final or empty.	351
	Parameter verbose should be final.	351
	'verbose' hides a field.	351
	Line contains a tab character.	352
	Line contains a tab character.	353
	Line contains a tab character.	355
	Line contains a tab character.	356
	Line contains a tab character.	357
	Line contains a tab character.	358
	Line contains a tab character.	359
	Method 'setWelcomeMsgEnabled' is not designed for extension - needs to be abstract, final or empty.	359
	Parameter welcomeMsgEnabled should be final.	359
	'welcomeMsgEnabled' hides a field.	359
	Line contains a tab character.	360
	Line contains a tab character.	361

yawn/ui/cli/package.html

Error		Line
	Missing package documentation file.	0

yawn/ui/gui/ExperimentCreator.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line contains a tab character.	17
	Missing a Javadoc comment.	17
	Line contains a tab character.	19
	Missing a Javadoc comment.	19
	Parameter args should be final.	19
	Line has trailing spaces.	20
	Line is longer than 80 characters.	20
	Line contains a tab character.	20
	Line has trailing spaces.	21
	Line contains a tab character.	21
	Line contains a tab character.	22
	Line is longer than 80 characters.	23
	Line contains a tab character.	23
	Line contains a tab character.	24
	Line has trailing spaces.	25
	Line is longer than 80 characters.	25
	Line contains a tab character.	25
	Line contains a tab character.	26
	Line contains a tab character.	27
	';' is preceded with whitespace.	27
	Line contains a tab character.	28
	Line has trailing spaces.	29
	Line contains a tab character.	29
	Line contains a tab character.	30
	'if' construct must use '{}'s.	31
	Line contains a tab character.	31
	Line contains a tab character.	32
	Line has trailing spaces.	33
	Line contains a tab character.	33
	Line contains a tab character.	34
	First sentence should end with a period.	35
	Line contains a tab character.	35
	Line contains a tab character.	36
	Line contains a tab character.	37
	Line contains a tab character.	38
	Line has trailing spaces.	39
	Line contains a tab character.	39
	Line contains a tab character.	40
	'300' is a magic number.	40
	',' is not followed by whitespace.	40
	'200' is a magic number.	40
	Line contains a tab character.	41
	Line contains a tab character.	42

yawn/ui/gui/SwingExperimentCreator.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line contains a tab character.	19
	Line has trailing spaces.	20
	Line contains a tab character.	20
	Line contains a tab character.	21
	Line contains a tab character.	22
	Line contains a tab character.	23
	Line contains a tab character.	24
	Line contains a tab character.	25
	Line contains a tab character.	26
	Line contains a tab character.	27
	Missing a Javadoc comment.	27
	Parameter args should be final.	27
	Line contains a tab character.	28
	First sentence should end with a period.	29
	Line contains a tab character.	29
	Line contains a tab character.	30
	Line has trailing spaces.	31
	Line contains a tab character.	31
	Unused Javadoc tag.	32
	Line contains a tab character.	32
	Line contains a tab character.	33
	Line contains a tab character.	34
	Line contains a tab character.	35
	'300' is a magic number.	35
	',' is not followed by whitespace.	35
	'200' is a magic number.	35
	Line contains a tab character.	36

yawn/ui/gui/package.html

Error		Line
	Missing package documentation file.	0

yawn/util/DefaultStatisticsFacility.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	2
	Line has trailing spaces.	10
	Line is longer than 80 characters.	11
	Line has trailing spaces.	12
	First sentence should end with a period.	18
	Line has trailing spaces.	20
	Line is longer than 80 characters.	21
	Line is longer than 80 characters.	24
	Method 'computePredictionError' is not designed for extension - needs to be abstract, final or empty.	24
	Parameter network should be final.	24
	Parameter set should be final.	24
	Line is longer than 80 characters.	28
	Missing a Javadoc comment.	28
	Parameter desired should be final.	28
	Parameter predictions should be final.	28
	Line is longer than 80 characters.	30
	Line has trailing spaces.	35
	Line is longer than 80 characters.	40
	Method 'meanSquaredError' is not designed for extension - needs to be abstract, final or empty.	40
	Parameter set should be final.	40
	Parameter predictions should be final.	40
	Line is longer than 80 characters.	49
	Method 'getPredictions' is not designed for extension - needs to be abstract, final or empty.	49
	Missing a Javadoc comment.	49
	Parameter net should be final.	49
	Parameter set should be final.	49

yawn/util/ErrorUtils.java

Error		Line
	File does not end with a newline.	0

yawn/util/ErrorUtils.java

Error		Line
	Missing a header - not enough lines in file.	1
	First sentence should end with a period.	9
	Line has trailing spaces.	11
	Line has trailing spaces.	13
	Utility classes should not have a public or default constructor.	17
	Line is longer than 80 characters.	19
	Missing a Javadoc comment.	19
	Parameter desired should be final.	19
	Parameter predictions should be final.	19
	Line is longer than 80 characters.	21
	Line has trailing spaces.	26
	Line is longer than 80 characters.	31
	Parameter desired should be final.	31
	Expected @param tag for 'desired'.	31
	Parameter predictions should be final.	31
	Expected @param tag for 'predictions'.	31

yawn/util/InputOutputPattern.java

Error		Line
	File does not end with a newline.	0

yawn/util/InputOutputPattern.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	7
	Line is longer than 80 characters.	8
	Line has trailing spaces.	9
	Utility classes should not have a public or default constructor.	13
	Line contains a tab character.	15
	Line has trailing spaces.	16
	Line contains a tab character.	16
	Line contains a tab character.	17
	Line contains a tab character.	18
	Line contains a tab character.	19
	Line contains a tab character.	20
	Variable 'input' must be private and have accessor methods.	20
	Line contains a tab character.	22
	Line has trailing spaces.	23
	Line contains a tab character.	23
	Line contains a tab character.	24
	Line contains a tab character.	25
	Line contains a tab character.	26
	Line contains a tab character.	27
	Variable 'output' must be private and have accessor methods.	27
	Missing a Javadoc comment.	29
	Parameter inputSize should be final.	29
	Parameter outputSize should be final.	29
	Line is longer than 80 characters.	34
	Missing a Javadoc comment.	34
	Parameter in should be final.	34

yawn/util/MiscUtils.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	11
	Line has trailing spaces.	13
	Utility classes should not have a public or default constructor.	17
	First sentence should end with a period.	19
	Line has trailing spaces.	21
	Parameter superClass should be final.	28
	Parameter testClass should be final.	28

yawn/util/Pattern.java

Error		Line
	File does not end with a newline.	0

yawn/util/Pattern.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	8
	Line has trailing spaces.	10
	Missing a Javadoc comment.	15
	Missing a Javadoc comment.	17
	Line has trailing spaces.	29
	Parameter source should be final.	33
	Line has trailing spaces.	43
	Parameter size should be final.	47
	Line has trailing spaces.	54
	Parameter source should be final.	58
	Line has trailing spaces.	64
	Method 'add' is not designed for extension - needs to be abstract, final or empty.	69
	Parameter operand should be final.	69
	Line has trailing spaces.	83
	Method 'add' is not designed for extension - needs to be abstract, final or empty.	88
	Parameter operand should be final.	88
	Line has trailing spaces.	101
	Method 'appendComponent' is not designed for extension - needs to be abstract, final or empty.	105
	Parameter value should be final.	105
	Avoid inline conditionals.	106
	Line has trailing spaces.	118
	Method 'asDoubleArray' is not designed for extension - needs to be abstract, final or empty.	121
	Line has trailing spaces.	127
	Method 'checkEqualSize' is not designed for extension - needs to be abstract, final or empty.	132
	Parameter comp should be final.	132
	Line is longer than 80 characters.	135
	Method 'clone' is not designed for extension - needs to be abstract, final or empty.	139
	Missing a Javadoc comment.	139
	Line has trailing spaces.	145
	Method 'dist' is not designed for extension - needs to be abstract, final or empty.	150
	Parameter other should be final.	150
	Definition of 'equals()' without corresponding definition of 'hashCode()'.	154
	Method 'equals' is not designed for extension - needs to be abstract, final or empty.	154
	Missing a Javadoc comment.	154
	Parameter other should be final.	154
	'if' construct must use '{}'s.	155
	Line has trailing spaces.	167
	Method 'getComponent' is not designed for extension - needs to be abstract, final or empty.	172
	Parameter i should be final.	172
	Line has trailing spaces.	178
	Method 'innerProduct' is not designed for extension - needs to be abstract, final or empty.	183
	Parameter operand should be final.	183
	Line has trailing spaces.	194
	Method 'multiply' is not designed for extension - needs to be abstract, final or empty.	199
	Parameter operand should be final.	199
	Line has trailing spaces.	211
	Method 'norm1' is not designed for extension - needs to be abstract, final or empty.	214
	Line has trailing spaces.	226
	Method 'norm2' is not designed for extension - needs to be abstract, final or empty.	229
	Line has trailing spaces.	239
	Method 'setAllComponents' is not designed for extension - needs to be abstract, final or empty.	243
	Parameter value should be final.	243
	Line has trailing spaces.	251
	Method 'setComponent' is not designed for extension - needs to be abstract, final or empty.	258
	Parameter value should be final.	258
	Parameter i should be final.	258
	Line has trailing spaces.	264
	Method 'setComponents' is not designed for extension - needs to be abstract, final or empty.	268
	Parameter orig should be final.	268
	Line has trailing spaces.	276
	Method 'size' is not designed for extension - needs to be abstract, final or empty.	279
	Method 'toString' is not designed for extension - needs to be abstract, final or empty.	283
	Missing a Javadoc comment.	283
	Line has trailing spaces.	294
	Parameter str should be final.	300
	Line has trailing spaces.	319
	Method 'randomize' is not designed for extension - needs to be abstract, final or empty.	325
	Parameter min should be final.	325
	Parameter max should be final.	325
	Line is longer than 80 characters.	326
	Method 'substract' is not designed for extension - needs to be abstract, final or empty.	332
	Missing a Javadoc comment.	332
	Parameter operand should be final.	332

yawn/util/StatisticsFacility.java

Error		Line
	Missing a header - not enough lines in file.	1
	Line has trailing spaces.	2
	Line has trailing spaces.	10
	Line is longer than 80 characters.	11
	Line has trailing spaces.	12
	Line is longer than 80 characters.	18
	Missing a Javadoc comment.	18
	Redundant 'public' modifier.	18

yawn/util/package.html

Error		Line
	Missing package documentation file.	0

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Files

yawn/YawnException.java

yawn/YawnRuntimeException.java

yawn/config/ConfigElement.java

yawn/config/ConfigurationException.java

yawn/config/NeuralNetworkConfig.java

yawn/config/NeuralNetworkConfig.java

yawn/config/ValidationException.java

yawn/config/package.html

yawn/envs/Environment.java

yawn/envs/Environment.java

yawn/envs/EnvironmentException.java

yawn/envs/EnvironmentException.java

yawn/envs/delve/DelveEnvironment.java

yawn/envs/delve/DelveEnvironment.java

yawn/envs/delve/DelveNotInitializedException.java

yawn/envs/delve/package.html

yawn/envs/package.html

yawn/envs/plaintext/PlainTextEnvironment.java

yawn/envs/plaintext/PlainTextEnvironment.java

yawn/envs/plaintext/package.html

yawn/envs/synthetic/CircleInTheSquareEnvironment.java

yawn/envs/synthetic/CircleInTheSquareEnvironment.java

yawn/envs/synthetic/SyntheticDataEnvironment.java

yawn/envs/synthetic/SyntheticDataEnvironment.java

yawn/envs/synthetic/XOrDataEnvironment.java

yawn/envs/synthetic/package.html

yawn/io/DuplicateKeyException.java

yawn/io/Experiment.java

yawn/io/Experiment.java

yawn/io/IStorage.java

yawn/io/KeyNotPresentException.java

yawn/io/StorageException.java

yawn/io/package.html

yawn/io/serialization/ISerializer.java

yawn/io/serialization/ISerializer.java

yawn/io/serialization/SerializationException.java

yawn/io/serialization/SerializationException.java

yawn/io/serialization/package.html

yawn/io/serialization/xml/BetwixtXmlSerializer.java

yawn/io/serialization/xml/BetwixtXmlSerializer.java

yawn/io/serialization/xml/CastorXmlSerializer.java

yawn/io/serialization/xml/CastorXmlSerializer.java

yawn/io/serialization/xml/package.html

yawn/io/xml/XmlStorage.java

yawn/io/xml/XmlStorage.java

yawn/io/xml/package.html

yawn/nn/InputLayer.java

yawn/nn/InputLayer.java

yawn/nn/Layer.java

yawn/nn/Layer.java

yawn/nn/NeuralNetwork.java

yawn/nn/NeuralNetwork.java

yawn/nn/NeuralNode.java

yawn/nn/NeuralNode.java

yawn/nn/OutputLayer.java

yawn/nn/OutputLayer.java

yawn/nn/appart/AppArt.java

yawn/nn/appart/AppArt.java

yawn/nn/appart/AppArtConfig.java

yawn/nn/appart/AppArtConfig.java

yawn/nn/appart/GainControlUnit.java

yawn/nn/appart/GainControlUnit.java

yawn/nn/appart/GainControlUnitOnMatching.java

yawn/nn/appart/GainControlUnitOnMatching.java

yawn/nn/appart/GainControlUnitOnOutput.java

yawn/nn/appart/GainControlUnitOnOutput.java

yawn/nn/appart/PredictionLayer.java

yawn/nn/appart/PredictionLayer.java

yawn/nn/appart/PredictionNeuralNode.java

yawn/nn/appart/PredictionNeuralNode.java

yawn/nn/appart/RadialBasisFunctionsNeuralNode.java

yawn/nn/appart/RadialBasisFunctionsNeuralNode.java